| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341635
Identifier: 146341635
GI number: 146341635
Start: 4928081
End: 4929730
Strand: Reverse
Name: 146341635
Synonym: BRADO4738
Alternate gene names: NA
Gene position: 4929730-4928081 (Counterclockwise)
Preceding gene: 146341642
Following gene: 146341633
Centisome position: 66.11
GC content: 64.79
Gene sequence:
>1650_bases ATGGCTTCAACGAGCAATCTTCCCATTGGTTTTGTTTGTATGTTCGCAGGAGATCTCTCGGTCTCTACTGTTAGATCGGC CTTGATCGCCGCCGGCTGGCTGCCGTGCGACGGCTCATCCTATGCAACCTCGCAATATGCCGCTCTCTATACGGCGATCG GCAACGCTCACGGCGGATCAGGCGGCAATTTCAACGTTCCGAACCTCACGGGACGATTCGTGCGGGGGACGACGGCGACC GCTACCATTGACCCCGACGCTGGGACGCGGACCGCGGCCGCTCCAGGGGGCGCGACGGGCAATGCCGTCGGATCGCTTCA GGCGGGTGCGACCGCCCTTCCGACCAATCCCTGGGTTCTCGCGCAGGATGGCGATCATTTCCATGCCTATCAGCATCTCG ACACCAACATGCATGAGGTGTGGAGCGGCAGCACCGACAGCATGGCGCGATGGTCCACCACGGTGACGATCGGGGCGGCG GGCGGTCACTTCCACACCATGTCTGGCGGGGACCCGGCGACGCTGCCGGTCAATGCGGCGCTCTATTGGGTGATCCGGGC GAGCGCCGCGCCGGCCGCCGCGCAGACGCCGGCCGGCGCAATTGCCGCGTTCGGCGCGAGCCTCGCCACGCAGAGCCCCA CAGGCTGGATCTACTGCAATGGCATGCCGCAGGCGATCAGTGCGAGCAGTCCGGCCTTCGCCAACACGCTCGGCTCGAAC TTCGGCGGCGACGGGGTCTCGGTGTTCAACGTGCCTGATCTGCGCGGGCAGTTTTTGCGCGGCACCAGCCACGGCACCGG CCGCGACCCCAATGCGTCCATTCGCTATGCGCTGCTGGGCGGCGGCAATACGGGAGATGCGGTGGGCTCAGCCCAGCATT ACTCGACCGCCAACGGCGTCATCCCCATCAGCGTCGCGGCCACCGGTGACCACACCCACGCTCAGGCCCTGGTGCCCGCC AATGATCACCATGCCGCCTATGGCGCCTCAGGTCCCGCAGCCTACAACACCATGGAATGGACCGACGACTGGACGAACAC TACGAAGGCGGGCGCCCACACCCATAGCGTCACCGGCGGCGACAAGGAGACGCGGCCGGTCAACATCTATCTCGACTGGT TCATCGCCAATGACGTCATTCCCGATGCGCCGCCGATCGGCTCGGTCACGGCCTATGGCGGTGACGTTACCTCGATCGAC AACCTGACCTCTTTGCTGGCCGATGGCTGGCTGCCCTGCGTCGGGCAAAAGCTCAAGAAGAACGACCCAACCTATGCCGC GCTCTACAAGGTGATCGGGGCCACCTTCGGGCAGGACAATCTCAACTTCTACCTGCCCGACCTCAGGGGCTACTTCGTCA TGGGGGCGGGCCAGGCGAAAGTGGGCGCCATCCAGGCGCAGTCGACCACCTGCCAGCCGATCACACCCTTCACGACGACA CCGATCGGCGATCACACCCATCAGGTGACGGGCATCCCCACCGACACCCACACGATCGACGTCGTCGCAGGCTGGGATCT CGCCGAGAACAATCCGAACACCACTGCCTCGACGGTTGCCGGCAACCACTCCCACCAGATCGTCGCGGGGGGCGACGCGG AGTCGCGGCCTGTCAACATCAACGTCGACTACATCATCCGCTTCAAGTAG
Upstream 100 bases:
>100_bases CCCATGAATCACAATTTTTGATTGTTTTCCCGTGCCGTTACCAATTTAGGCGACGACAATTACTCAGATATTTTTCCTCA ATTCTTATGGAGAAGTGGCA
Downstream 100 bases:
>100_bases CGGAATGGACCCGATGGCCGCCGCAAGCGGCGGCCATCGTTTTCCGATCTCGGCGGCCCGTGCCGGCTCACTTCTCCAGC CGCGCCAGCAGGCTCGACGT
Product: phage-like protein
Products: NA
Alternate protein names: 35 KDa Protein; Phage-Like Protein
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MASTSNLPIGFVCMFAGDLSVSTVRSALIAAGWLPCDGSSYATSQYAALYTAIGNAHGGSGGNFNVPNLTGRFVRGTTAT ATIDPDAGTRTAAAPGGATGNAVGSLQAGATALPTNPWVLAQDGDHFHAYQHLDTNMHEVWSGSTDSMARWSTTVTIGAA GGHFHTMSGGDPATLPVNAALYWVIRASAAPAAAQTPAGAIAAFGASLATQSPTGWIYCNGMPQAISASSPAFANTLGSN FGGDGVSVFNVPDLRGQFLRGTSHGTGRDPNASIRYALLGGGNTGDAVGSAQHYSTANGVIPISVAATGDHTHAQALVPA NDHHAAYGASGPAAYNTMEWTDDWTNTTKAGAHTHSVTGGDKETRPVNIYLDWFIANDVIPDAPPIGSVTAYGGDVTSID NLTSLLADGWLPCVGQKLKKNDPTYAALYKVIGATFGQDNLNFYLPDLRGYFVMGAGQAKVGAIQAQSTTCQPITPFTTT PIGDHTHQVTGIPTDTHTIDVVAGWDLAENNPNTTASTVAGNHSHQIVAGGDAESRPVNINVDYIIRFK
Sequences:
>Translated_549_residues MASTSNLPIGFVCMFAGDLSVSTVRSALIAAGWLPCDGSSYATSQYAALYTAIGNAHGGSGGNFNVPNLTGRFVRGTTAT ATIDPDAGTRTAAAPGGATGNAVGSLQAGATALPTNPWVLAQDGDHFHAYQHLDTNMHEVWSGSTDSMARWSTTVTIGAA GGHFHTMSGGDPATLPVNAALYWVIRASAAPAAAQTPAGAIAAFGASLATQSPTGWIYCNGMPQAISASSPAFANTLGSN FGGDGVSVFNVPDLRGQFLRGTSHGTGRDPNASIRYALLGGGNTGDAVGSAQHYSTANGVIPISVAATGDHTHAQALVPA NDHHAAYGASGPAAYNTMEWTDDWTNTTKAGAHTHSVTGGDKETRPVNIYLDWFIANDVIPDAPPIGSVTAYGGDVTSID NLTSLLADGWLPCVGQKLKKNDPTYAALYKVIGATFGQDNLNFYLPDLRGYFVMGAGQAKVGAIQAQSTTCQPITPFTTT PIGDHTHQVTGIPTDTHTIDVVAGWDLAENNPNTTASTVAGNHSHQIVAGGDAESRPVNINVDYIIRFK >Mature_548_residues ASTSNLPIGFVCMFAGDLSVSTVRSALIAAGWLPCDGSSYATSQYAALYTAIGNAHGGSGGNFNVPNLTGRFVRGTTATA TIDPDAGTRTAAAPGGATGNAVGSLQAGATALPTNPWVLAQDGDHFHAYQHLDTNMHEVWSGSTDSMARWSTTVTIGAAG GHFHTMSGGDPATLPVNAALYWVIRASAAPAAAQTPAGAIAAFGASLATQSPTGWIYCNGMPQAISASSPAFANTLGSNF GGDGVSVFNVPDLRGQFLRGTSHGTGRDPNASIRYALLGGGNTGDAVGSAQHYSTANGVIPISVAATGDHTHAQALVPAN DHHAAYGASGPAAYNTMEWTDDWTNTTKAGAHTHSVTGGDKETRPVNIYLDWFIANDVIPDAPPIGSVTAYGGDVTSIDN LTSLLADGWLPCVGQKLKKNDPTYAALYKVIGATFGQDNLNFYLPDLRGYFVMGAGQAKVGAIQAQSTTCQPITPFTTTP IGDHTHQVTGIPTDTHTIDVVAGWDLAENNPNTTASTVAGNHSHQIVAGGDAESRPVNINVDYIIRFK
Specific function: Unknown
COG id: COG5301
COG function: function code R; Phage-related tail fibre protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56488; Mature: 56356
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTSNLPIGFVCMFAGDLSVSTVRSALIAAGWLPCDGSSYATSQYAALYTAIGNAHGGS CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEHHCCCCCCC GGNFNVPNLTGRFVRGTTATATIDPDAGTRTAAAPGGATGNAVGSLQAGATALPTNPWVL CCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEE AQDGDHFHAYQHLDTNMHEVWSGSTDSMARWSTTVTIGAAGGHFHTMSGGDPATLPVNAA ECCCCCEEEEHHCCCCHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEECCEE LYWVIRASAAPAAAQTPAGAIAAFGASLATQSPTGWIYCNGMPQAISASSPAFANTLGSN EEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHCCC FGGDGVSVFNVPDLRGQFLRGTSHGTGRDPNASIRYALLGGGNTGDAVGSAQHYSTANGV CCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCE IPISVAATGDHTHAQALVPANDHHAAYGASGPAAYNTMEWTDDWTNTTKAGAHTHSVTGG EEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC DKETRPVNIYLDWFIANDVIPDAPPIGSVTAYGGDVTSIDNLTSLLADGWLPCVGQKLKK CCCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHC NDPTYAALYKVIGATFGQDNLNFYLPDLRGYFVMGAGQAKVGAIQAQSTTCQPITPFTTT CCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCC PIGDHTHQVTGIPTDTHTIDVVAGWDLAENNPNTTASTVAGNHSHQIVAGGDAESRPVNI CCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCEEE NVDYIIRFK EEEEEEEEC >Mature Secondary Structure ASTSNLPIGFVCMFAGDLSVSTVRSALIAAGWLPCDGSSYATSQYAALYTAIGNAHGGS CCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEHHCCCCCCC GGNFNVPNLTGRFVRGTTATATIDPDAGTRTAAAPGGATGNAVGSLQAGATALPTNPWVL CCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEE AQDGDHFHAYQHLDTNMHEVWSGSTDSMARWSTTVTIGAAGGHFHTMSGGDPATLPVNAA ECCCCCEEEEHHCCCCHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEECCEE LYWVIRASAAPAAAQTPAGAIAAFGASLATQSPTGWIYCNGMPQAISASSPAFANTLGSN EEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHCCC FGGDGVSVFNVPDLRGQFLRGTSHGTGRDPNASIRYALLGGGNTGDAVGSAQHYSTANGV CCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCE IPISVAATGDHTHAQALVPANDHHAAYGASGPAAYNTMEWTDDWTNTTKAGAHTHSVTGG EEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC DKETRPVNIYLDWFIANDVIPDAPPIGSVTAYGGDVTSIDNLTSLLADGWLPCVGQKLKK CCCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHC NDPTYAALYKVIGATFGQDNLNFYLPDLRGYFVMGAGQAKVGAIQAQSTTCQPITPFTTT CCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCC PIGDHTHQVTGIPTDTHTIDVVAGWDLAENNPNTTASTVAGNHSHQIVAGGDAESRPVNI CCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCEEE NVDYIIRFK EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA