| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341604
Identifier: 146341604
GI number: 146341604
Start: 4896830
End: 4897558
Strand: Reverse
Name: 146341604
Synonym: BRADO4705
Alternate gene names: NA
Gene position: 4897558-4896830 (Counterclockwise)
Preceding gene: 146341605
Following gene: 146341603
Centisome position: 65.68
GC content: 65.43
Gene sequence:
>729_bases ATGCCCGGGTTGTCCTCATTTCTGTTGCTCAGCGCCGCCGTTTTCTTCGGCGCCTTCGTCTCCGGCCTTGCCGGATTTGC GTTCTCCGCGGTGGCCGGCGCGATCCTGCTGCATGTGTTGCAGCCGCTGGAGGCTGTGCCCTTGATGATGGCGTGCAGCG TCGGCGTCCAGGCGACGAATCTCTGGGCGCTCCGCCGCAGCATCCGCTGGAAGGAGAGTGGCGTCCTGATCCTTGGCGGT CTGTTGGGCGTGCCCCTGGCGCTATGGCTGCTGCACAATGCGGATGCCCGGCTGTTTCAGCAGGTCTTTGGCGCGGCGAT CGCGATCTACGCCGGCTATATGCTGTGCAAGCCCGCGCTCGGCAGCCTGCAACCCATGAACAAGGGCCGCACGGCCATTG TCGGCTTCGGCGGCGGTCTCATCGGCGGCCTCACCGCGATGCCCGGCGCGCTGCCGACGATCTGGTGCGAGCTGCACGGC CTGCCGAAGGCCGAGCAGCGCGGCCTGGTCCAACCGTTCATCGCCGCCATTCAACTCGCCTCGCTGACGGTGATGCTGGC GAGGCAGGACCTGTCCTCCAAAGTGGTCATCGATCTCGCGTTGAGCATCCCGGCGCTGCTCGCCGGCACCGCGCTCGGCA TCCTCGCCTTCCGCAAGGTCAACGACGCGCTGTTCAGGAAGATCATCCTGGGGATTTTGCTGATATCGGGGTTGCTGCTG GTCTATTGA
Upstream 100 bases:
>100_bases GGGCCGCGGCCACCGGCGACGGCGTGTCCGCGGTGTCGATGCGTCAGGACTACGATTGAAGCCATTTTGGTGTCAGCCTC ATTTCAGCCGGAGATAGTTC
Downstream 100 bases:
>100_bases CCCATGTCGGGCGACGTACGCGGCTGGCGACCGGATGAGCACAGGTACGCGGTTCGGATATTCAAAAATATTGCTTTACG AAATTCGGAAACTGTGCTCT
Product: putative permease
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPGLSSFLLLSAAVFFGAFVSGLAGFAFSAVAGAILLHVLQPLEAVPLMMACSVGVQATNLWALRRSIRWKESGVLILGG LLGVPLALWLLHNADARLFQQVFGAAIAIYAGYMLCKPALGSLQPMNKGRTAIVGFGGGLIGGLTAMPGALPTIWCELHG LPKAEQRGLVQPFIAAIQLASLTVMLARQDLSSKVVIDLALSIPALLAGTALGILAFRKVNDALFRKIILGILLISGLLL VY
Sequences:
>Translated_242_residues MPGLSSFLLLSAAVFFGAFVSGLAGFAFSAVAGAILLHVLQPLEAVPLMMACSVGVQATNLWALRRSIRWKESGVLILGG LLGVPLALWLLHNADARLFQQVFGAAIAIYAGYMLCKPALGSLQPMNKGRTAIVGFGGGLIGGLTAMPGALPTIWCELHG LPKAEQRGLVQPFIAAIQLASLTVMLARQDLSSKVVIDLALSIPALLAGTALGILAFRKVNDALFRKIILGILLISGLLL VY >Mature_241_residues PGLSSFLLLSAAVFFGAFVSGLAGFAFSAVAGAILLHVLQPLEAVPLMMACSVGVQATNLWALRRSIRWKESGVLILGGL LGVPLALWLLHNADARLFQQVFGAAIAIYAGYMLCKPALGSLQPMNKGRTAIVGFGGGLIGGLTAMPGALPTIWCELHGL PKAEQRGLVQPFIAAIQLASLTVMLARQDLSSKVVIDLALSIPALLAGTALGILAFRKVNDALFRKIILGILLISGLLLV Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25326; Mature: 25195
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLSSFLLLSAAVFFGAFVSGLAGFAFSAVAGAILLHVLQPLEAVPLMMACSVGVQATN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LWALRRSIRWKESGVLILGGLLGVPLALWLLHNADARLFQQVFGAAIAIYAGYMLCKPAL HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GSLQPMNKGRTAIVGFGGGLIGGLTAMPGALPTIWCELHGLPKAEQRGLVQPFIAAIQLA CCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHH SLTVMLARQDLSSKVVIDLALSIPALLAGTALGILAFRKVNDALFRKIILGILLISGLLL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VY HC >Mature Secondary Structure PGLSSFLLLSAAVFFGAFVSGLAGFAFSAVAGAILLHVLQPLEAVPLMMACSVGVQATN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LWALRRSIRWKESGVLILGGLLGVPLALWLLHNADARLFQQVFGAAIAIYAGYMLCKPAL HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GSLQPMNKGRTAIVGFGGGLIGGLTAMPGALPTIWCELHGLPKAEQRGLVQPFIAAIQLA CCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHH SLTVMLARQDLSSKVVIDLALSIPALLAGTALGILAFRKVNDALFRKIILGILLISGLLL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VY HC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA