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The map label for this gene is ywhC [H]

Identifier: 146341549

GI number: 146341549

Start: 4836790

End: 4837470

Strand: Direct

Name: ywhC [H]

Synonym: BRADO4647

Alternate gene names: 146341549

Gene position: 4836790-4837470 (Clockwise)

Preceding gene: 146341548

Following gene: 146341550

Centisome position: 64.87

GC content: 63.29

Gene sequence:

>681_bases
TTGAACCTCTCGCTCGCCGGCATCTCCGCCTGGATCCTGCCGGTCATCATCGCCATCACCTTCCACGAGGCCGCGCACGC
CTATGTCGCCTGGCGCTTCGGCGATGACACCGCGTTGCAACTCGGTCGCGTCAGCTTCAACCCGCTCCGGCACATCGACC
CGTTCGGGACGATCCTGCTGCCAGGCATGCTGCTGCTGTCGGGATCCCCCTTCGTGTTCGGCTATGCCAAGCCGGTCCCG
GTCAATTACCGCAACCTGCAGCCGCTGCGGGCCGGCATGATCATGGTGGCCCTCGCAGGACCGGCGACCAACATCGCGCT
GGCGCTGGCTGCCGCGCTTGCCTTCCACGCCATGCCGCTGGTGCCGGTGGAGGGCACGCCGTGGGTCGCGCGCACGCTTT
ATATCGCCTTCTCGTTCAACATCCTGCTGGCGGTGTTCAACATGCTCCCGATACCGCCGCTCGACGGCAGCCGGATCGCG
GTCGGCCTTCTGCCAGGACTTCTGGCGCGGCCTTTTGCCCGGCTCGAGCCCTATGGCATGCTGATTCTGATCGGATTTTT
GATCCTGCTGCCCCTGGCAGGTTCCCAGTTCGGTCTTAATCTTGATCTTGTGTCAAGGCTGGTCCGCGCCACGACCGATT
CTCTCCAGCAATTGATTCTGTTATTGACGGGTAACGCCTAA

Upstream 100 bases:

>100_bases
CAATCAATGACGGCCTGCCGCAATTTCCGGAGAATCCCGCGTAGCATCGCGGAACCGTCATGCCTATCTAGGGCTGACAC
AGCTTTCGGAACCCGCGCCC

Downstream 100 bases:

>100_bases
GTCTTTCGCATCCGGGACGGCAAACGAACTCCGAGGCACTCTTGGTCAAAGCCGCTGACATGATGATCGCGCGCCGCGCC
GACACGCGCGCCCGCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNLSLAGISAWILPVIIAITFHEAAHAYVAWRFGDDTALQLGRVSFNPLRHIDPFGTILLPGMLLLSGSPFVFGYAKPVP
VNYRNLQPLRAGMIMVALAGPATNIALALAAALAFHAMPLVPVEGTPWVARTLYIAFSFNILLAVFNMLPIPPLDGSRIA
VGLLPGLLARPFARLEPYGMLILIGFLILLPLAGSQFGLNLDLVSRLVRATTDSLQQLILLLTGNA

Sequences:

>Translated_226_residues
MNLSLAGISAWILPVIIAITFHEAAHAYVAWRFGDDTALQLGRVSFNPLRHIDPFGTILLPGMLLLSGSPFVFGYAKPVP
VNYRNLQPLRAGMIMVALAGPATNIALALAAALAFHAMPLVPVEGTPWVARTLYIAFSFNILLAVFNMLPIPPLDGSRIA
VGLLPGLLARPFARLEPYGMLILIGFLILLPLAGSQFGLNLDLVSRLVRATTDSLQQLILLLTGNA
>Mature_226_residues
MNLSLAGISAWILPVIIAITFHEAAHAYVAWRFGDDTALQLGRVSFNPLRHIDPFGTILLPGMLLLSGSPFVFGYAKPVP
VNYRNLQPLRAGMIMVALAGPATNIALALAAALAFHAMPLVPVEGTPWVARTLYIAFSFNILLAVFNMLPIPPLDGSRIA
VGLLPGLLARPFARLEPYGMLILIGFLILLPLAGSQFGLNLDLVSRLVRATTDSLQQLILLLTGNA

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24256; Mature: 24256

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLAGISAWILPVIIAITFHEAAHAYVAWRFGDDTALQLGRVSFNPLRHIDPFGTILL
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHEECCCCCCCCCCCCCHHHHHH
PGMLLLSGSPFVFGYAKPVPVNYRNLQPLRAGMIMVALAGPATNIALALAAALAFHAMPL
HHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCE
VPVEGTPWVARTLYIAFSFNILLAVFNMLPIPPLDGSRIAVGLLPGLLARPFARLEPYGM
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCHHHHCCCCHH
LILIGFLILLPLAGSQFGLNLDLVSRLVRATTDSLQQLILLLTGNA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLSLAGISAWILPVIIAITFHEAAHAYVAWRFGDDTALQLGRVSFNPLRHIDPFGTILL
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHEECCCCCCCCCCCCCHHHHHH
PGMLLLSGSPFVFGYAKPVPVNYRNLQPLRAGMIMVALAGPATNIALALAAALAFHAMPL
HHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCE
VPVEGTPWVARTLYIAFSFNILLAVFNMLPIPPLDGSRIAVGLLPGLLARPFARLEPYGM
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCHHHHCCCCHH
LILIGFLILLPLAGSQFGLNLDLVSRLVRATTDSLQQLILLLTGNA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]