| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341532
Identifier: 146341532
GI number: 146341532
Start: 4820858
End: 4821640
Strand: Reverse
Name: 146341532
Synonym: BRADO4630
Alternate gene names: NA
Gene position: 4821640-4820858 (Counterclockwise)
Preceding gene: 146341534
Following gene: 146341531
Centisome position: 64.66
GC content: 71.52
Gene sequence:
>783_bases ATGCGAGAGCTGTTTGACGAGGTGGTCGGCCAGGGCAAGCCCGATCCGCAGGAGGCGGCGCGGCAGGCGATGCGCGCGCC GCAGCGCAAGCGCTTCTACAAGGAGGCCGGCACGGCCGAGGCCGAGGGCGGCCATTACGTCACGCTCGATGGAAGGCCGA TCCGCACCCCCTCGGGCCGCGTCGTCGTCGTTCCCGTGCGCGAGCTGGCGGAGGCGGTGGCCGCGGAGTGGGGCGCGCAA GGCGAGACCATCGATCCCGCGAGCATGCCGCTGACACGCTTCGCCAACAGCGTCGTGCAGTCGGTGGTCGACCGCGTCGA GGACGTGCGCGCGGACATGGCCAGATACCTCCAGTCCGACCTGCTGTTCTACCGCGCCGGCCATCCCGAGGGGCTGGTGG AACGCGAGGCCGCGCATTGGGATCCGGTGCTGGACTGGGCGCGCGACAGCCTCGGCGCGCATTTCATCCTGTCCGAGGGC ATCATGCACGTGACCCAGCCCGATGCCGCCGTGCGTGCGGCGCGCGAAGTGCTGCCGACCGGCCCCTGGGCGGTGGCGGC CGCGCATGTCGTGACCACCGTCACCGGCTCGGCCTTGCTCGCCCTCGCGCTGACCCATGGCGTGCGCGATGCCGACCAGG TCTGGGCGGCCGCGAATGTCGATGAGGACTGGAATATCGAGCAATGGGGCGCCGACGAGGAGGCGGTGCACCGCCGCGCC GCCAAGCAGGTCGACTATCAGGCCGCCGTCCGCATCCTCCGGGCGGTCGAGGCCGCCATCTGA
Upstream 100 bases:
>100_bases AGGAGACGCATCGGCAGCTCGCATTTCGGTCGATCAGGCCTTATCTACCGCGCAAACAACAAATCCCGTGTAATCTTCCC TGCAAGAGGGCCGGAATCTG
Downstream 100 bases:
>100_bases GGCCGGTTAACGCCGGGTTTAGGGCGAAGGTCTAGTCTGCCGCGCGTAACCCGAGTACGCGCATGGTCCAGAGTGTCACC CCGTCGCCGTCCGTCAGCGC
Product: putative chaperone protein
Products: NA
Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRELFDEVVGQGKPDPQEAARQAMRAPQRKRFYKEAGTAEAEGGHYVTLDGRPIRTPSGRVVVVPVRELAEAVAAEWGAQ GETIDPASMPLTRFANSVVQSVVDRVEDVRADMARYLQSDLLFYRAGHPEGLVEREAAHWDPVLDWARDSLGAHFILSEG IMHVTQPDAAVRAAREVLPTGPWAVAAAHVVTTVTGSALLALALTHGVRDADQVWAAANVDEDWNIEQWGADEEAVHRRA AKQVDYQAAVRILRAVEAAI
Sequences:
>Translated_260_residues MRELFDEVVGQGKPDPQEAARQAMRAPQRKRFYKEAGTAEAEGGHYVTLDGRPIRTPSGRVVVVPVRELAEAVAAEWGAQ GETIDPASMPLTRFANSVVQSVVDRVEDVRADMARYLQSDLLFYRAGHPEGLVEREAAHWDPVLDWARDSLGAHFILSEG IMHVTQPDAAVRAAREVLPTGPWAVAAAHVVTTVTGSALLALALTHGVRDADQVWAAANVDEDWNIEQWGADEEAVHRRA AKQVDYQAAVRILRAVEAAI >Mature_260_residues MRELFDEVVGQGKPDPQEAARQAMRAPQRKRFYKEAGTAEAEGGHYVTLDGRPIRTPSGRVVVVPVRELAEAVAAEWGAQ GETIDPASMPLTRFANSVVQSVVDRVEDVRADMARYLQSDLLFYRAGHPEGLVEREAAHWDPVLDWARDSLGAHFILSEG IMHVTQPDAAVRAAREVLPTGPWAVAAAHVVTTVTGSALLALALTHGVRDADQVWAAANVDEDWNIEQWGADEEAVHRRA AKQVDYQAAVRILRAVEAAI
Specific function: Unknown
COG id: COG5387
COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21735485, Length=231, Percent_Identity=32.034632034632, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24585626, Length=210, Percent_Identity=24.7619047619048, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28423; Mature: 28423
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELFDEVVGQGKPDPQEAARQAMRAPQRKRFYKEAGTAEAEGGHYVTLDGRPIRTPSGR CHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCC VVVVPVRELAEAVAAEWGAQGETIDPASMPLTRFANSVVQSVVDRVEDVRADMARYLQSD EEEEEHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFYRAGHPEGLVEREAAHWDPVLDWARDSLGAHFILSEGIMHVTQPDAAVRAAREVLPT HHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCHHCCCCHHHHHHHHHHCCC GPWAVAAAHVVTTVTGSALLALALTHGVRDADQVWAAANVDEDWNIEQWGADEEAVHRRA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHCCCCHHHHHHHH AKQVDYQAAVRILRAVEAAI HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRELFDEVVGQGKPDPQEAARQAMRAPQRKRFYKEAGTAEAEGGHYVTLDGRPIRTPSGR CHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCC VVVVPVRELAEAVAAEWGAQGETIDPASMPLTRFANSVVQSVVDRVEDVRADMARYLQSD EEEEEHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFYRAGHPEGLVEREAAHWDPVLDWARDSLGAHFILSEGIMHVTQPDAAVRAAREVLPT HHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCHHCCCCHHHHHHHHHHCCC GPWAVAAAHVVTTVTGSALLALALTHGVRDADQVWAAANVDEDWNIEQWGADEEAVHRRA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHCCCCHHHHHHHH AKQVDYQAAVRILRAVEAAI HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA