| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341511
Identifier: 146341511
GI number: 146341511
Start: 4798135
End: 4798599
Strand: Direct
Name: 146341511
Synonym: BRADO4608
Alternate gene names: NA
Gene position: 4798135-4798599 (Clockwise)
Preceding gene: 146341503
Following gene: 146341527
Centisome position: 64.35
GC content: 67.53
Gene sequence:
>465_bases ATGGATGCGGCTATCGGGCTTGCCGAGGCCGGTCAGCAATACCTCTTGCCAGGCAGCCTGCTGCGCTCCGAGGCCGAGGT GCTGTCGGTGACATCTCGCCCCGCCGCAAAGGCCGAGGCGACGCTGTTTGCCGTGCCCGGTGGCGAGCCGCTGCTCCATC TCCATCGCATCCGCCGCGTCGCCCGGGCGCCGGTGCTGCATTCACGCATCGCGATGGTCGCGAGCCGCGTGCCAGACTTT CCGCGCGAGACGAACAAGGTTCCTGGCATCCGCATCGCCGCCGTGCGCGAAAAGGTCACGGCCGAGGTAGCGACCAGGGA GGATCGCAAGCTGCTCGGGCTGCCAGCCCCGAGCGCCGTGCTGGTCATCGACGAAGAGGCCTACGACCAGTCCGGCGCAC TCGCGATCCTGAGCCAGCACCGCGCGACGACGGCGCATCATTATTATTCGAACGAGATCCGCTGA
Upstream 100 bases:
>100_bases TTTCGGGACAGAGCTCGGGACTGAACTCGTTTGATAGATAGGCGAGTACCGATTTCGCCAGTGCGACGATGTCAGACAGT TTGGTCGACTCACCGGGCGC
Downstream 100 bases:
>100_bases GCAGCGGTCCGCTCAGCAGCCCCAGCGCAACGCCGCCGTGTGCACCGGCGCATCCCACAGCGGGAGCGTTGCATCGTCGA GCGCTGTCACGGTGAGCGAG
Product: putative transcriptional regulator (fragment)
Products: NA
Alternate protein names: GntR Family Transcriptional Regulator; Transcriptional Regulator Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDAAIGLAEAGQQYLLPGSLLRSEAEVLSVTSRPAAKAEATLFAVPGGEPLLHLHRIRRVARAPVLHSRIAMVASRVPDF PRETNKVPGIRIAAVREKVTAEVATREDRKLLGLPAPSAVLVIDEEAYDQSGALAILSQHRATTAHHYYSNEIR
Sequences:
>Translated_154_residues MDAAIGLAEAGQQYLLPGSLLRSEAEVLSVTSRPAAKAEATLFAVPGGEPLLHLHRIRRVARAPVLHSRIAMVASRVPDF PRETNKVPGIRIAAVREKVTAEVATREDRKLLGLPAPSAVLVIDEEAYDQSGALAILSQHRATTAHHYYSNEIR >Mature_154_residues MDAAIGLAEAGQQYLLPGSLLRSEAEVLSVTSRPAAKAEATLFAVPGGEPLLHLHRIRRVARAPVLHSRIAMVASRVPDF PRETNKVPGIRIAAVREKVTAEVATREDRKLLGLPAPSAVLVIDEEAYDQSGALAILSQHRATTAHHYYSNEIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16672; Mature: 16672
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAIGLAEAGQQYLLPGSLLRSEAEVLSVTSRPAAKAEATLFAVPGGEPLLHLHRIRRV CCCCCCHHHCCCEECCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCHHHHHHHHHHH ARAPVLHSRIAMVASRVPDFPRETNKVPGIRIAAVREKVTAEVATREDRKLLGLPAPSAV HHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCEE LVIDEEAYDQSGALAILSQHRATTAHHYYSNEIR EEEECCCCCCCCCEEEEHHCCCHHHHHHHCCCCC >Mature Secondary Structure MDAAIGLAEAGQQYLLPGSLLRSEAEVLSVTSRPAAKAEATLFAVPGGEPLLHLHRIRRV CCCCCCHHHCCCEECCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCHHHHHHHHHHH ARAPVLHSRIAMVASRVPDFPRETNKVPGIRIAAVREKVTAEVATREDRKLLGLPAPSAV HHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEECCCCCCEE LVIDEEAYDQSGALAILSQHRATTAHHYYSNEIR EEEECCCCCCCCCEEEEHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA