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The map label for this gene is dppD [H]

Identifier: 146341504

GI number: 146341504

Start: 4795701

End: 4796084

Strand: Reverse

Name: dppD [H]

Synonym: BRADO4599

Alternate gene names: 146341504

Gene position: 4796084-4795701 (Counterclockwise)

Preceding gene: 146341505

Following gene: 146341499

Centisome position: 64.32

GC content: 66.41

Gene sequence:

>384_bases
ATGAGTTCGGCGCTCGCCATCTCGAATTATGAGCTGGATTACGTAACGGCCGCCGGCGCAGTCGAAGTGCTGCGCGAGGT
GTCGCTCGACATCGCGCCCGGCGAGGTGCTTGGCCTGGTCGGCGAATCCGGCTCCGGCAAGAGCTCGCTGGCCTGGGCGC
TGATGCGGCACCTGCCGGGCAATGCCCGCAAGGTGTCGGGCTCGCTGCGGCTCGGCGACATCGACCTGCGGACGCTTGGT
CCGAAACAGCTGACCGCGGTGCGTGGCCGCCGCATCGCCATGGTGTTCCAGGATCCATCCACCGCGCTGAATCCAACGCT
GACCATCGGTCGCCAGGTCACCGAGGCGCTGATGCACCATCGCGCGCTGAATGCTCCGAATTGA

Upstream 100 bases:

>100_bases
GGATGCTGATCGCGCCATCGGCCGCGATCGCGCTCTCCGCCATCGCGTTCAATCTTCTCGGCGACGCTCTGCGCGATGCG
CTCAACCCGCGGGATGATCG

Downstream 100 bases:

>100_bases
TGAAGTAGTCCGCGCGCAGCCCCTGCTCGATCAGCGAGAAGGTCCCGACACCGCCCTGCAGCTCGCCGGCGACATAGGTC
AGAATGACGTCGCCTGCCGG

Product: putative dipeptide ABC transporter ATP-binding protein dppD (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSSALAISNYELDYVTAAGAVEVLREVSLDIAPGEVLGLVGESGSGKSSLAWALMRHLPGNARKVSGSLRLGDIDLRTLG
PKQLTAVRGRRIAMVFQDPSTALNPTLTIGRQVTEALMHHRALNAPN

Sequences:

>Translated_127_residues
MSSALAISNYELDYVTAAGAVEVLREVSLDIAPGEVLGLVGESGSGKSSLAWALMRHLPGNARKVSGSLRLGDIDLRTLG
PKQLTAVRGRRIAMVFQDPSTALNPTLTIGRQVTEALMHHRALNAPN
>Mature_126_residues
SSALAISNYELDYVTAAGAVEVLREVSLDIAPGEVLGLVGESGSGKSSLAWALMRHLPGNARKVSGSLRLGDIDLRTLGP
KQLTAVRGRRIAMVFQDPSTALNPTLTIGRQVTEALMHHRALNAPN

Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system. Expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787759, Length=121, Percent_Identity=44.6280991735537, Blast_Score=91, Evalue=2e-20,
Organism=Escherichia coli, GI48994883, Length=120, Percent_Identity=37.5, Blast_Score=87, Evalue=2e-19,
Organism=Escherichia coli, GI1788506, Length=123, Percent_Identity=39.8373983739837, Blast_Score=83, Evalue=7e-18,
Organism=Escherichia coli, GI1787548, Length=113, Percent_Identity=35.3982300884956, Blast_Score=78, Evalue=2e-16,
Organism=Escherichia coli, GI145693107, Length=130, Percent_Identity=35.3846153846154, Blast_Score=77, Evalue=4e-16,
Organism=Escherichia coli, GI1789963, Length=98, Percent_Identity=39.7959183673469, Blast_Score=76, Evalue=6e-16,
Organism=Escherichia coli, GI1787500, Length=91, Percent_Identity=40.6593406593407, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 13459; Mature: 13327

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSALAISNYELDYVTAAGAVEVLREVSLDIAPGEVLGLVGESGSGKSSLAWALMRHLPG
CCCCEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
NARKVSGSLRLGDIDLRTLGPKQLTAVRGRRIAMVFQDPSTALNPTLTIGRQVTEALMHH
CCEEECCCEEECCEEEEECCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
RALNAPN
HCCCCCC
>Mature Secondary Structure 
SSALAISNYELDYVTAAGAVEVLREVSLDIAPGEVLGLVGESGSGKSSLAWALMRHLPG
CCCEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
NARKVSGSLRLGDIDLRTLGPKQLTAVRGRRIAMVFQDPSTALNPTLTIGRQVTEALMHH
CCEEECCCEEECCEEEEECCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
RALNAPN
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]