| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341502
Identifier: 146341502
GI number: 146341502
Start: 4795092
End: 4795445
Strand: Direct
Name: 146341502
Synonym: BRADO4596
Alternate gene names: NA
Gene position: 4795092-4795445 (Clockwise)
Preceding gene: 146341501
Following gene: 146341503
Centisome position: 64.31
GC content: 66.38
Gene sequence:
>354_bases ATGACCAAGAATTACAACGAGATCTGCAAGGACATCTCGGGCAACCTGAAAACTCTGCGCAAGGACATCCCCGATGTCAT GCAAGGCTTCTCGGCGATGGCGCGGGCCGCCGGCGCCGACGGCGCGCTCGACAAGAAGACCAAGGAGCTGATCGCGCTGG CGATCGGCGTCGCCGTCCGCTGCGACGGTTGCACCGGCTTCCATGCCGAGGCGCTGGTGCGCCTCGGCGCCACGCGCCAG GAGGTCGAGGAAACGCTCGGCATGGCGATCTACATGGGCGGCGGTCCGTCGCTGATGTACGCCGCCGACGCGATCGGCGC CTTCGAGCAGTTCCAGCAGCAGGAGGGCGCCTGA
Upstream 100 bases:
>100_bases GGCCTCATCCACCCTGCTGACCGTGCTCGTCATCCCCGCGATCTACGTCGCGCTGCGCGAGCCCGGCAAACCTACCATGA AAGCACCCTAGGACATGTCC
Downstream 100 bases:
>100_bases GGCGGGCTCAGCCGCAGATGTCGAGAATGGCAAGCATGTAGATGCGGATCATGTCGAGATAATCGGGAATGTCGACGCGC TCGTCCGGCATCGTGTTGTA
Product: putative carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: ORF 7 [H]
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTKNYNEICKDISGNLKTLRKDIPDVMQGFSAMARAAGADGALDKKTKELIALAIGVAVRCDGCTGFHAEALVRLGATRQ EVEETLGMAIYMGGGPSLMYAADAIGAFEQFQQQEGA
Sequences:
>Translated_117_residues MTKNYNEICKDISGNLKTLRKDIPDVMQGFSAMARAAGADGALDKKTKELIALAIGVAVRCDGCTGFHAEALVRLGATRQ EVEETLGMAIYMGGGPSLMYAADAIGAFEQFQQQEGA >Mature_116_residues TKNYNEICKDISGNLKTLRKDIPDVMQGFSAMARAAGADGALDKKTKELIALAIGVAVRCDGCTGFHAEALVRLGATRQE VEETLGMAIYMGGGPSLMYAADAIGAFEQFQQQEGA
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1053 and P.denitrificans COX locus Uncharacterized protein 4 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 12404; Mature: 12273
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNYNEICKDISGNLKTLRKDIPDVMQGFSAMARAAGADGALDKKTKELIALAIGVAVR CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHE CDGCTGFHAEALVRLGATRQEVEETLGMAIYMGGGPSLMYAADAIGAFEQFQQQEGA ECCCCCHHHHHHHHHCCCHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKNYNEICKDISGNLKTLRKDIPDVMQGFSAMARAAGADGALDKKTKELIALAIGVAVR CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHE CDGCTGFHAEALVRLGATRQEVEETLGMAIYMGGGPSLMYAADAIGAFEQFQQQEGA ECCCCCHHHHHHHHHCCCHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2061286 [H]