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The map label for this gene is yjbJ [H]

Identifier: 146341445

GI number: 146341445

Start: 4734739

End: 4735764

Strand: Reverse

Name: yjbJ [H]

Synonym: BRADO4536

Alternate gene names: 146341445

Gene position: 4735764-4734739 (Counterclockwise)

Preceding gene: 146341448

Following gene: 146341444

Centisome position: 63.51

GC content: 67.93

Gene sequence:

>1026_bases
TTGTCTGTCGGCTTTTGGTTTTCCGCCGTCATACCGGCCATAATTTCCTTTGTTTCCATGCATCGCTCGATCCCGGCTCT
CAGCGTCGCTGTCTGTCTTCTGGTCGCGACGATCGGATGCGCCGCGGCCAATGAGGGCGAGACCGTCTGGCCGCTCGCCG
ACGGGGCGCCGCCGGCAAAGGACGAGTCCAAGGACGCCGCGGCCAAGCCTGAGGATCCGAAGGAGAGCGGCACGCGCGAG
GCGATCTGCCTGATGATCGAGTCGGCCGCCAAGTCGAACGATCTGCCGCTCGAATTCTTCGCCCGCGTGATCTGGCAGGA
GAGCCGGTTCCAGAGCGACGCGGTCGGACCGGTCACCCGCAGCGGTCAGCGCGCCCTGGGCATCGCCCAGTTCATGCCGG
GCACCGCGAGCGAGCGCGAACTGCTCGATCCGTTCGATCCGGTGCAGGCGCTGCCGAAATCGGCGCAGTTTTTGGCCGAG
CTGCGGGATCAGTTCGGCAATCTCGGGCTCGCCGCGGCGGCCTATAATGCCGGCCCGCGCCGGGTACAGAACTGGCTCGC
CGGCAAGGGCCAGATACCGTGGGAGACGCGTAACTACGTCTCGGCGATCACCGGCACATCGATCGACGACTGGGCTGCGG
CGGGCAAGGGCGGCAAGTTGCCGCCGAGCGCGCGGCCGACCTCCTGTCATCAGCTGATGGCGCTGTTGAAGCGCGCGCCC
AATCCGTTCGTCACCCAGCTCGAGCAGCACGTCGCCATGGCGGCTGCGAAGTCCTGGGGCGTGCAGCTGGCGGCCGGCTT
CGACCGCAACAAGGCGCTGTCGATGTATGCGCGGGCCATCAAGGGGCTCGGCTCTGTCATCGGCGATCGTGATCCGAGCC
TGCTGTCCTCGGTGATGCGCACGCGCGGCAATCGCGCCTTCTATCAGGTGCGGATCGGCGCCGACACGCGCGGCGAGGCC
GACGCGCTGTGCAGCCGCATCCGCGGCGCCGGCGGCGCCTGCTTCGTGCTGCGCAACCGGGCCTAG

Upstream 100 bases:

>100_bases
GCGGTCATCGGTCGCGCTCCTGAAGCGATGGCGGATTGCTAGCCGGCCGATGCTCCGTGTCAAGGCGTCGCGCTTTGGAA
CCGGAACGGGGCCTCCGGCT

Downstream 100 bases:

>100_bases
AGGGCCGCGGCTTGCGCCGTATGCAGAGCAGCGCGCGCGTGATGGCGGTTGACGCGGGGCGGTTTCGAAAGCCTTATCGC
GGTCCGCTTCGCTGGGCCGC

Product: putative transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSVGFWFSAVIPAIISFVSMHRSIPALSVAVCLLVATIGCAAANEGETVWPLADGAPPAKDESKDAAAKPEDPKESGTRE
AICLMIESAAKSNDLPLEFFARVIWQESRFQSDAVGPVTRSGQRALGIAQFMPGTASERELLDPFDPVQALPKSAQFLAE
LRDQFGNLGLAAAAYNAGPRRVQNWLAGKGQIPWETRNYVSAITGTSIDDWAAAGKGGKLPPSARPTSCHQLMALLKRAP
NPFVTQLEQHVAMAAAKSWGVQLAAGFDRNKALSMYARAIKGLGSVIGDRDPSLLSSVMRTRGNRAFYQVRIGADTRGEA
DALCSRIRGAGGACFVLRNRA

Sequences:

>Translated_341_residues
MSVGFWFSAVIPAIISFVSMHRSIPALSVAVCLLVATIGCAAANEGETVWPLADGAPPAKDESKDAAAKPEDPKESGTRE
AICLMIESAAKSNDLPLEFFARVIWQESRFQSDAVGPVTRSGQRALGIAQFMPGTASERELLDPFDPVQALPKSAQFLAE
LRDQFGNLGLAAAAYNAGPRRVQNWLAGKGQIPWETRNYVSAITGTSIDDWAAAGKGGKLPPSARPTSCHQLMALLKRAP
NPFVTQLEQHVAMAAAKSWGVQLAAGFDRNKALSMYARAIKGLGSVIGDRDPSLLSSVMRTRGNRAFYQVRIGADTRGEA
DALCSRIRGAGGACFVLRNRA
>Mature_340_residues
SVGFWFSAVIPAIISFVSMHRSIPALSVAVCLLVATIGCAAANEGETVWPLADGAPPAKDESKDAAAKPEDPKESGTREA
ICLMIESAAKSNDLPLEFFARVIWQESRFQSDAVGPVTRSGQRALGIAQFMPGTASERELLDPFDPVQALPKSAQFLAEL
RDQFGNLGLAAAAYNAGPRRVQNWLAGKGQIPWETRNYVSAITGTSIDDWAAAGKGGKLPPSARPTSCHQLMALLKRAPN
PFVTQLEQHVAMAAAKSWGVQLAAGFDRNKALSMYARAIKGLGSVIGDRDPSLLSSVMRTRGNRAFYQVRIGADTRGEAD
ALCSRIRGAGGACFVLRNRA

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 36370; Mature: 36239

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGFWFSAVIPAIISFVSMHRSIPALSVAVCLLVATIGCAAANEGETVWPLADGAPPAK
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
DESKDAAAKPEDPKESGTREAICLMIESAAKSNDLPLEFFARVIWQESRFQSDAVGPVTR
CCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
SGQRALGIAQFMPGTASERELLDPFDPVQALPKSAQFLAELRDQFGNLGLAAAAYNAGPR
CCCHHHHHHHHCCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCHH
RVQNWLAGKGQIPWETRNYVSAITGTSIDDWAAAGKGGKLPPSARPTSCHQLMALLKRAP
HHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
NPFVTQLEQHVAMAAAKSWGVQLAAGFDRNKALSMYARAIKGLGSVIGDRDPSLLSSVMR
CHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TRGNRAFYQVRIGADTRGEADALCSRIRGAGGACFVLRNRA
HCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure 
SVGFWFSAVIPAIISFVSMHRSIPALSVAVCLLVATIGCAAANEGETVWPLADGAPPAK
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
DESKDAAAKPEDPKESGTREAICLMIESAAKSNDLPLEFFARVIWQESRFQSDAVGPVTR
CCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
SGQRALGIAQFMPGTASERELLDPFDPVQALPKSAQFLAELRDQFGNLGLAAAAYNAGPR
CCCHHHHHHHHCCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCHH
RVQNWLAGKGQIPWETRNYVSAITGTSIDDWAAAGKGGKLPPSARPTSCHQLMALLKRAP
HHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
NPFVTQLEQHVAMAAAKSWGVQLAAGFDRNKALSMYARAIKGLGSVIGDRDPSLLSSVMR
CHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TRGNRAFYQVRIGADTRGEADALCSRIRGAGGACFVLRNRA
HCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]