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The map label for this gene is recO

Identifier: 146341374

GI number: 146341374

Start: 4661473

End: 4662219

Strand: Reverse

Name: recO

Synonym: BRADO4460

Alternate gene names: 146341374

Gene position: 4662219-4661473 (Counterclockwise)

Preceding gene: 146341375

Following gene: 146341373

Centisome position: 62.52

GC content: 68.94

Gene sequence:

>747_bases
ATGGAATGGACCGATGACGGCATCGTGCTGGGGCTGCGGCGGCACGGCGAATCCTCCGCCGTCGTCGAACTGCTGACGCG
CGAGCACGGCCGCCATCTCGGTCTCGTGCGCGGTGCCGCGGGCAAGCGGATGCGGCCGGTCCTGCAGCCCGGCAACACGG
TGCGCGCGATCTGGCGGGCGCGGCTCGACGAGCATCTCGGCATGTACGCCGTCGACGGGCTCACCTTGCGCGCCGCGGAG
CTGATGTCCGCCTCGCACGGTGCCTATGGCGTGACGCACCTGGCGTCCCTTGCACGGCTGTTGCCCGAGCGCGATCCGCA
CGAGGACATGTATTTCAGGCTCGAACATGCGCTTGATGATTTCGCGGATGCCGGCGCCGCCGCTGCCCATATCGTGCGCT
TCGAGCTCGCGATCCTGACCGAGCTCGGCTTTGGTCTCGATCTGGAATCCTGCGCGGCGACCGGCGAGACCTCCGACCTG
ATCTACGTCTCGCCGAAATCCGGCGGCGCGGTCTCGCGCACCGCCGGCGCGCCATGGGCCGACCGGCTGCTGCCTTTGCC
GCCATTCCTGCGCGAGAGCGACGAGGATCACGGCTGGTCCGACCAGGATCTGCTCGACGGTTTTCGCCTCACCGGCCTGT
TCCTGCTGCGCCACGTCCTGGAGCCGCGGGGGCAAGGCCATTCGGATGCGCGTGAAGGCTTCATCAATGCGGTGACGCGG
GCGAGGACGCGGCTCACGCGCGCTTGA

Upstream 100 bases:

>100_bases
GCGGTCCTGCCACTGGTGGGCCCGCTGCGCTTTGCCCGCCCTACGGTTTCGTCAATGCTGGCGGCTTTCGGGCGGCCGAT
TCGTGGAGACCGCTCACCCG

Downstream 100 bases:

>100_bases
GCCGAGAGGGGAAACATCATGGGACTGCTCGTCGACGGCCAATGGCACGACGTCTGGTATGACACGGCGGCCTCCGGCGG
CCGCTTCGTGCGCAAGGATT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRARLDEHLGMYAVDGLTLRAAE
LMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDDFADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDL
IYVSPKSGGAVSRTAGAPWADRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR
ARTRLTRA

Sequences:

>Translated_248_residues
MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRARLDEHLGMYAVDGLTLRAAE
LMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDDFADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDL
IYVSPKSGGAVSRTAGAPWADRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR
ARTRLTRA
>Mature_248_residues
MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRARLDEHLGMYAVDGLTLRAAE
LMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDDFADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDL
IYVSPKSGGAVSRTAGAPWADRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR
ARTRLTRA

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_BRASO (A4YWC5)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001206422.1
- ProteinModelPortal:   A4YWC5
- STRING:   A4YWC5
- GeneID:   5114856
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO4460
- eggNOG:   COG1381
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   PRK00085
- BioCyc:   BSP376:BRADO4460-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27212; Mature: 27212

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRA
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
RLDEHLGMYAVDGLTLRAAELMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDD
HHHHHCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDLIYVSPKSGGAVSRTAGAPWA
HHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHH
DRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR
HHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ARTRLTRA
HHHHHCCC
>Mature Secondary Structure
MEWTDDGIVLGLRRHGESSAVVELLTREHGRHLGLVRGAAGKRMRPVLQPGNTVRAIWRA
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
RLDEHLGMYAVDGLTLRAAELMSASHGAYGVTHLASLARLLPERDPHEDMYFRLEHALDD
HHHHHCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
FADAGAAAAHIVRFELAILTELGFGLDLESCAATGETSDLIYVSPKSGGAVSRTAGAPWA
HHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHH
DRLLPLPPFLRESDEDHGWSDQDLLDGFRLTGLFLLRHVLEPRGQGHSDAREGFINAVTR
HHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ARTRLTRA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA