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The map label for this gene is mmsR [H]

Identifier: 146341328

GI number: 146341328

Start: 4612124

End: 4613200

Strand: Reverse

Name: mmsR [H]

Synonym: BRADO4410

Alternate gene names: 146341328

Gene position: 4613200-4612124 (Counterclockwise)

Preceding gene: 146341329

Following gene: 146341327

Centisome position: 61.87

GC content: 62.12

Gene sequence:

>1077_bases
ATGACAATCCCGAGCGGCTCGGGCCTCACCCACGAACGATCAATCGGCTGGACAGGCGGATGCTTTGCGCTAGCATTTGG
AGCGCCGGTTGTGTCGCTTGAGCGGAGCGTGGAGTGTGCTTTGGACGAAACCTTTTCTCAAGACAGGGTAGACGATGCAT
CAGGCGTGAGTTGCAGTGGACTGACGCCGACCAAGGTCGAACGCATTTGGGGTGTTGCGGCCAAGGCTCACGGGTTCGGC
ACGCTCGGCTTCTCGGCAGCGCTGTGGGATTGTGACAGAACATCGGGGCAGACGGTCGAGCGCCTCCGTCCGTCCTGCGA
CCACACCCACGTCGTTTCGATCTGGACCCGGGGAACGACGGTCTCTGAACTATACTTCGACAACAAGCTGCGTTTCCGGC
GGGTGAGGCGGCGTGGCACTTTCCAGCTGAGTAGGGCAGGAGAATCGCTTCGGGTTCTGCTGTCGGAGACCAGCGGAAGC
TGCCTTGACCTCTATCTGCCCGTGTCCCTGCTCGCCTCGGTGGTGGGAACCGAGTTCGATTACGGCGATGGCGGGCGTCT
GGAACTGCTGCCCCTGAAGCTGGAAGCCGATCCGGTGATCACGCGCCTGGGTGACGAGATGGCTGCCGAGATCGAACGGC
CAGGCGTCGCGACTCAAGCCGCGCTGGATGCTGCCGCTCTGACGTTATGTGTCAATCTCGTGCGCCGGTGGTCCAACCTC
TCCGGTGTCGTGCGACCAAGCCGCGCGGGGCTCACAACGGCACAGGTCAGGAAGGCGACGAGCTACCTGAAAGACACCAT
GCACCGCGATGTCTCGCTGCAGACACTGGCGGAACAGGTGGGTCTCTCGCCCTTCCACTTCGCGCGTGCCTTCAAGGCTG
CCGTCGGCGTGCCTCCGCATCAGTATCAGATCAGACTTCGCATGATGCGGGCCCGCGAGCTGCTCGAGAATACGATGTAC
TCGGTGGGCGAGGTCGCGACGCAGGTGGGATATGATGACGCCAGCTATTTCAGCAGGGTGTTCAGGAGAGAACACGGCGT
CTCTCCGGGGCAATTCCGTCGCGCCAAAGTGAGCTGA

Upstream 100 bases:

>100_bases
AGCGCGACGAAGACAGCCCGTTTGACTCCGCCAGCGCTCGCGATGCCCGTATCGAACAGGGTACGAAGATCTTGCTGGTG
ATGGCGGCGATCGCACGAAA

Downstream 100 bases:

>100_bases
GGCTCGTACAGGCTTCTCGGTGAGCGAGACACCGGTGGCGGATCGCAGATCGTGTTCCGTTCTATCGTTTGGCATTCTCA
TTCGGTTGAGCTGAAAGCGG

Product: putative regulator (HTH, AraC-type)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTIPSGSGLTHERSIGWTGGCFALAFGAPVVSLERSVECALDETFSQDRVDDASGVSCSGLTPTKVERIWGVAAKAHGFG
TLGFSAALWDCDRTSGQTVERLRPSCDHTHVVSIWTRGTTVSELYFDNKLRFRRVRRRGTFQLSRAGESLRVLLSETSGS
CLDLYLPVSLLASVVGTEFDYGDGGRLELLPLKLEADPVITRLGDEMAAEIERPGVATQAALDAAALTLCVNLVRRWSNL
SGVVRPSRAGLTTAQVRKATSYLKDTMHRDVSLQTLAEQVGLSPFHFARAFKAAVGVPPHQYQIRLRMMRARELLENTMY
SVGEVATQVGYDDASYFSRVFRREHGVSPGQFRRAKVS

Sequences:

>Translated_358_residues
MTIPSGSGLTHERSIGWTGGCFALAFGAPVVSLERSVECALDETFSQDRVDDASGVSCSGLTPTKVERIWGVAAKAHGFG
TLGFSAALWDCDRTSGQTVERLRPSCDHTHVVSIWTRGTTVSELYFDNKLRFRRVRRRGTFQLSRAGESLRVLLSETSGS
CLDLYLPVSLLASVVGTEFDYGDGGRLELLPLKLEADPVITRLGDEMAAEIERPGVATQAALDAAALTLCVNLVRRWSNL
SGVVRPSRAGLTTAQVRKATSYLKDTMHRDVSLQTLAEQVGLSPFHFARAFKAAVGVPPHQYQIRLRMMRARELLENTMY
SVGEVATQVGYDDASYFSRVFRREHGVSPGQFRRAKVS
>Mature_357_residues
TIPSGSGLTHERSIGWTGGCFALAFGAPVVSLERSVECALDETFSQDRVDDASGVSCSGLTPTKVERIWGVAAKAHGFGT
LGFSAALWDCDRTSGQTVERLRPSCDHTHVVSIWTRGTTVSELYFDNKLRFRRVRRRGTFQLSRAGESLRVLLSETSGSC
LDLYLPVSLLASVVGTEFDYGDGGRLELLPLKLEADPVITRLGDEMAAEIERPGVATQAALDAAALTLCVNLVRRWSNLS
GVVRPSRAGLTTAQVRKATSYLKDTMHRDVSLQTLAEQVGLSPFHFARAFKAAVGVPPHQYQIRLRMMRARELLENTMYS
VGEVATQVGYDDASYFSRVFRREHGVSPGQFRRAKVS

Specific function: Regulatory protein for the mmsAB operon. Activates the transcription of the mmsAB genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=96, Percent_Identity=35.4166666666667, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786251, Length=122, Percent_Identity=30.327868852459, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39236; Mature: 39105

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPSGSGLTHERSIGWTGGCFALAFGAPVVSLERSVECALDETFSQDRVDDASGVSCSG
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECC
LTPTKVERIWGVAAKAHGFGTLGFSAALWDCDRTSGQTVERLRPSCDHTHVVSIWTRGTT
CCHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCCCCHHHHHCCCCCCCEEEEEEECCCC
VSELYFDNKLRFRRVRRRGTFQLSRAGESLRVLLSETSGSCLDLYLPVSLLASVVGTEFD
HHHHHHCCHHHHHHHHHCCCEEEHHCCCHHEEEEECCCCCEEEEHHHHHHHHHHHCCCCC
YGDGGRLELLPLKLEADPVITRLGDEMAAEIERPGVATQAALDAAALTLCVNLVRRWSNL
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SGVVRPSRAGLTTAQVRKATSYLKDTMHRDVSLQTLAEQVGLSPFHFARAFKAAVGVPPH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
QYQIRLRMMRARELLENTMYSVGEVATQVGYDDASYFSRVFRREHGVSPGQFRRAKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TIPSGSGLTHERSIGWTGGCFALAFGAPVVSLERSVECALDETFSQDRVDDASGVSCSG
CCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECC
LTPTKVERIWGVAAKAHGFGTLGFSAALWDCDRTSGQTVERLRPSCDHTHVVSIWTRGTT
CCHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCCCCHHHHHCCCCCCCEEEEEEECCCC
VSELYFDNKLRFRRVRRRGTFQLSRAGESLRVLLSETSGSCLDLYLPVSLLASVVGTEFD
HHHHHHCCHHHHHHHHHCCCEEEHHCCCHHEEEEECCCCCEEEEHHHHHHHHHHHCCCCC
YGDGGRLELLPLKLEADPVITRLGDEMAAEIERPGVATQAALDAAALTLCVNLVRRWSNL
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SGVVRPSRAGLTTAQVRKATSYLKDTMHRDVSLQTLAEQVGLSPFHFARAFKAAVGVPPH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
QYQIRLRMMRARELLENTMYSVGEVATQVGYDDASYFSRVFRREHGVSPGQFRRAKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339433; 10984043 [H]