Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146341314

Identifier: 146341314

GI number: 146341314

Start: 4593784

End: 4595076

Strand: Reverse

Name: 146341314

Synonym: BRADO4396

Alternate gene names: NA

Gene position: 4595076-4593784 (Counterclockwise)

Preceding gene: 146341317

Following gene: 146341313

Centisome position: 61.62

GC content: 66.43

Gene sequence:

>1293_bases
ATGCGTGCCATGACGCCGCTCATCACGTCAGTTCTGTTGTCGGTGCTGTGGGCGACCGCGCTCAACGGGCCTGCTTGGGC
CGAGACCGTGACGCTGCGCATGGCGTGGTACTCCGACGGCAACGAGGGCGAGGTCATGACCGACCTGCTCAAGCGCTTCC
ACGACCAGAACAAGGACATCGAGGTCGTCCTCGACCAGGTGCCGTACAAGGCGATTAACGAGAACCTGCCTGTGCAGCTC
GCCTCCGGCCAGGGACCGGACATGGCGCGGGTCGTGGATATGGGCGGGCTGTCGCGCTACGCGCTCGACATGCGCCCGCT
GCTCAAGGACCCCGGCTATTGGGACGCGAATTTCGGCCCGTTCCTCGCCTGGATGCGTCCGGCCGGCGACACCCAGGCGA
TCCCTGGCTTCATGACCCAGCTCACCGTCACCGGCCCGTTCGTCAACAAGACACTGTTCGAGCAGGCCGGCGTTCCGACG
CCCGGCGACAGGGCGACGTGGGAGGATTGGGCGAAGGCGGTGAAGGAGGTGGCGGCCAAGGTGCAGGCGCCGTTCCCGCT
CGCGCTCGACCGCTCTGGCCACAGATTCTACGCGCTGGCGATGTCGCAGGGCGCGCAGGTGTTCGCGGCCAATGGCGAGC
CCGACGTCGTCGACGACGGATTCAAGCGGGCCGCGCAATTGATATACGACTGGCACAAGTCCGGCGTGATGTCGAAGGAG
CTGTGGGGCTCGGTGTCGGGCACCGCGTATCGCGGCGCCAATGACGAGTTCAAGAACGCGCAGGTGGTGATGTATCTGTC
CGGCTCCTGGCAGATCGCGCAGTTCGCCAAGACCGTCGGCAATGCGTTCGACTGGGTGGCGGTGCCCAACCCCTGCGGTC
CCGGCGGCTGCAGCAGCATGCCGGGCGGCGCCGGTCTGATCGCGTTCAAGTCGACGCAGCATCCGAAGGAGGTCGCGCGG
CTGATGGAGTATCTGGCGAGCGAGCCGGTGCTGGCGGAGTTCTACGCCCGCACGCTGTTCGTGCCCGGCCATCTCGGTCT
TGCAAAGAAGGGCGTCGACTATCCGACCGCGAGCCCCGAGGCCGCCGCCGCGCTGAAGGTGTTCACTGCCAGCGCCGCGC
AGATCTCGCCGCTGGCCTATCGTACCCAGGGCTACATCAACAGCCGCATCATCTTCAACGCCGTCATCAGCCGGCTCGGC
CAGGCCGTCTCCGGCGAGACGACGCTCGATGAAGCCTACAAGCGCATCACCGCCGACGTCAGCCAGCAGATCGCCGAGCG
CAACAAGAAGTGA

Upstream 100 bases:

>100_bases
CTTGAGGAAACGCCGGCGCCGCAGCTGGCTTCGACGAACCCGTCGCGGCTCGGCTGCGAAGGTGTCAGCAAGCCGGCGCC
TCATCAGGGGAGAAACAATC

Downstream 100 bases:

>100_bases
GTGCGGCGAACTCACAGCCGGGAATCGTCACGATGCCGGACGCGCCATCGGCTGCAGCGCCGCAGCCCGGCCGCGTAGCG
GGCGCCGTCGGATGGCTCGG

Product: putative sugar ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDIEVVLDQVPYKAINENLPVQL
ASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGPFLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPT
PGDRATWEDWAKAVKEVAAKVQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE
LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSMPGGAGLIAFKSTQHPKEVAR
LMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPEAAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLG
QAVSGETTLDEAYKRITADVSQQIAERNKK

Sequences:

>Translated_430_residues
MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDIEVVLDQVPYKAINENLPVQL
ASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGPFLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPT
PGDRATWEDWAKAVKEVAAKVQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE
LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSMPGGAGLIAFKSTQHPKEVAR
LMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPEAAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLG
QAVSGETTLDEAYKRITADVSQQIAERNKK
>Mature_430_residues
MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDIEVVLDQVPYKAINENLPVQL
ASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGPFLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPT
PGDRATWEDWAKAVKEVAAKVQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE
LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSMPGGAGLIAFKSTQHPKEVAR
LMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPEAAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLG
QAVSGETTLDEAYKRITADVSQQIAERNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46724; Mature: 46724

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDI
CCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCH
EVVLDQVPYKAINENLPVQLASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGP
HHHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
FLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPTPGDRATWEDWAKAVKEVAAK
HHHEECCCCCCCCCCCHHHEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE
HCCCCCEEEECCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSM
HHCCCCCCEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCC
PGGAGLIAFKSTQHPKEVARLMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPE
CCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCHHHCCCCCCCCCCH
AAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLGQAVSGETTLDEAYKRITADV
HHHHHHHHHCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SQQIAERNKK
HHHHHHHCCC
>Mature Secondary Structure
MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDI
CCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCH
EVVLDQVPYKAINENLPVQLASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGP
HHHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
FLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPTPGDRATWEDWAKAVKEVAAK
HHHEECCCCCCCCCCCHHHEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE
HCCCCCEEEECCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSM
HHCCCCCCEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCC
PGGAGLIAFKSTQHPKEVARLMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPE
CCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCHHHCCCCCCCCCCH
AAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLGQAVSGETTLDEAYKRITADV
HHHHHHHHHCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SQQIAERNKK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA