| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341314
Identifier: 146341314
GI number: 146341314
Start: 4593784
End: 4595076
Strand: Reverse
Name: 146341314
Synonym: BRADO4396
Alternate gene names: NA
Gene position: 4595076-4593784 (Counterclockwise)
Preceding gene: 146341317
Following gene: 146341313
Centisome position: 61.62
GC content: 66.43
Gene sequence:
>1293_bases ATGCGTGCCATGACGCCGCTCATCACGTCAGTTCTGTTGTCGGTGCTGTGGGCGACCGCGCTCAACGGGCCTGCTTGGGC CGAGACCGTGACGCTGCGCATGGCGTGGTACTCCGACGGCAACGAGGGCGAGGTCATGACCGACCTGCTCAAGCGCTTCC ACGACCAGAACAAGGACATCGAGGTCGTCCTCGACCAGGTGCCGTACAAGGCGATTAACGAGAACCTGCCTGTGCAGCTC GCCTCCGGCCAGGGACCGGACATGGCGCGGGTCGTGGATATGGGCGGGCTGTCGCGCTACGCGCTCGACATGCGCCCGCT GCTCAAGGACCCCGGCTATTGGGACGCGAATTTCGGCCCGTTCCTCGCCTGGATGCGTCCGGCCGGCGACACCCAGGCGA TCCCTGGCTTCATGACCCAGCTCACCGTCACCGGCCCGTTCGTCAACAAGACACTGTTCGAGCAGGCCGGCGTTCCGACG CCCGGCGACAGGGCGACGTGGGAGGATTGGGCGAAGGCGGTGAAGGAGGTGGCGGCCAAGGTGCAGGCGCCGTTCCCGCT CGCGCTCGACCGCTCTGGCCACAGATTCTACGCGCTGGCGATGTCGCAGGGCGCGCAGGTGTTCGCGGCCAATGGCGAGC CCGACGTCGTCGACGACGGATTCAAGCGGGCCGCGCAATTGATATACGACTGGCACAAGTCCGGCGTGATGTCGAAGGAG CTGTGGGGCTCGGTGTCGGGCACCGCGTATCGCGGCGCCAATGACGAGTTCAAGAACGCGCAGGTGGTGATGTATCTGTC CGGCTCCTGGCAGATCGCGCAGTTCGCCAAGACCGTCGGCAATGCGTTCGACTGGGTGGCGGTGCCCAACCCCTGCGGTC CCGGCGGCTGCAGCAGCATGCCGGGCGGCGCCGGTCTGATCGCGTTCAAGTCGACGCAGCATCCGAAGGAGGTCGCGCGG CTGATGGAGTATCTGGCGAGCGAGCCGGTGCTGGCGGAGTTCTACGCCCGCACGCTGTTCGTGCCCGGCCATCTCGGTCT TGCAAAGAAGGGCGTCGACTATCCGACCGCGAGCCCCGAGGCCGCCGCCGCGCTGAAGGTGTTCACTGCCAGCGCCGCGC AGATCTCGCCGCTGGCCTATCGTACCCAGGGCTACATCAACAGCCGCATCATCTTCAACGCCGTCATCAGCCGGCTCGGC CAGGCCGTCTCCGGCGAGACGACGCTCGATGAAGCCTACAAGCGCATCACCGCCGACGTCAGCCAGCAGATCGCCGAGCG CAACAAGAAGTGA
Upstream 100 bases:
>100_bases CTTGAGGAAACGCCGGCGCCGCAGCTGGCTTCGACGAACCCGTCGCGGCTCGGCTGCGAAGGTGTCAGCAAGCCGGCGCC TCATCAGGGGAGAAACAATC
Downstream 100 bases:
>100_bases GTGCGGCGAACTCACAGCCGGGAATCGTCACGATGCCGGACGCGCCATCGGCTGCAGCGCCGCAGCCCGGCCGCGTAGCG GGCGCCGTCGGATGGCTCGG
Product: putative sugar ABC transporter periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDIEVVLDQVPYKAINENLPVQL ASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGPFLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPT PGDRATWEDWAKAVKEVAAKVQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSMPGGAGLIAFKSTQHPKEVAR LMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPEAAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLG QAVSGETTLDEAYKRITADVSQQIAERNKK
Sequences:
>Translated_430_residues MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDIEVVLDQVPYKAINENLPVQL ASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGPFLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPT PGDRATWEDWAKAVKEVAAKVQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSMPGGAGLIAFKSTQHPKEVAR LMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPEAAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLG QAVSGETTLDEAYKRITADVSQQIAERNKK >Mature_430_residues MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDIEVVLDQVPYKAINENLPVQL ASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGPFLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPT PGDRATWEDWAKAVKEVAAKVQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSMPGGAGLIAFKSTQHPKEVAR LMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPEAAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLG QAVSGETTLDEAYKRITADVSQQIAERNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46724; Mature: 46724
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDI CCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCH EVVLDQVPYKAINENLPVQLASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGP HHHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC FLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPTPGDRATWEDWAKAVKEVAAK HHHEECCCCCCCCCCCHHHEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE HCCCCCEEEECCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSM HHCCCCCCEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCC PGGAGLIAFKSTQHPKEVARLMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPE CCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCHHHCCCCCCCCCCH AAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLGQAVSGETTLDEAYKRITADV HHHHHHHHHCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SQQIAERNKK HHHHHHHCCC >Mature Secondary Structure MRAMTPLITSVLLSVLWATALNGPAWAETVTLRMAWYSDGNEGEVMTDLLKRFHDQNKDI CCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCH EVVLDQVPYKAINENLPVQLASGQGPDMARVVDMGGLSRYALDMRPLLKDPGYWDANFGP HHHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC FLAWMRPAGDTQAIPGFMTQLTVTGPFVNKTLFEQAGVPTPGDRATWEDWAKAVKEVAAK HHHEECCCCCCCCCCCHHHEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VQAPFPLALDRSGHRFYALAMSQGAQVFAANGEPDVVDDGFKRAAQLIYDWHKSGVMSKE HCCCCCEEEECCCCEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH LWGSVSGTAYRGANDEFKNAQVVMYLSGSWQIAQFAKTVGNAFDWVAVPNPCGPGGCSSM HHCCCCCCEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCC PGGAGLIAFKSTQHPKEVARLMEYLASEPVLAEFYARTLFVPGHLGLAKKGVDYPTASPE CCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCHHHCCCCCCCCCCH AAAALKVFTASAAQISPLAYRTQGYINSRIIFNAVISRLGQAVSGETTLDEAYKRITADV HHHHHHHHHCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SQQIAERNKK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA