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The map label for this gene is araQ [H]

Identifier: 146341312

GI number: 146341312

Start: 4591652

End: 4592707

Strand: Reverse

Name: araQ [H]

Synonym: BRADO4394

Alternate gene names: 146341312

Gene position: 4592707-4591652 (Counterclockwise)

Preceding gene: 146341313

Following gene: 146341311

Centisome position: 61.59

GC content: 65.34

Gene sequence:

>1056_bases
ATGCGCCTTTTGAGCCTGCTTGGTCAGCGTCGCAGCGGTCCCGGACGAAAGCTGCACTGGACCGACATCGCCGCCTACGC
CTATCTCGCGCTCGGCGTCGTCCTGATGTTTGGCCCGGTAGTGTGGCTGGTGCTGTCGTCGTTCAAGACGCCAAGCGCGC
TGCTGGAGTTTCCGCCGTCGCTGCTGCCGTCGGCCCAGGTCGAGGTCCAGGTCGCCGGCCAGCCGCAGCCGCTGCCGCTG
TTCCGTGCGACGCTGCCCGACGGATCGGTGCGCGAGCTCGCGCAATTGCGGCGCGTCGGGCTGATCGCCCAGATGGTCGA
TCCCGAAGACCCGTTGCAGCAGTTCCGCGTCGCGATCGACAAGCGCGAGCCGGTGCGCCGCGTTGCCTTCGCGACCGCGA
ACTACACCGAGCCGCTGCAGCGCTTCGCCTTCCTGCGCTTCCTGTTCAACTCGGTGTTCGTGACCGCAGTCGCCACGCTG
ATCACGCTGCTGATCAATTCGATGGCCGCCTATGCGCTCGCCGTCTACGCATTCCCCGGCAAGCAGGCTGCCACGCTTGC
GGTGATCGGCACGCTGATGATCCCGATCACCATCGTCCTGGTGCCGGTCTATCTGGTCGTGACCGAGCTCGGTCTCGCCA
ACTCGCTATGGGCGGTGATCCTGCCGGGCGCCGCGACGCCGACCGGGGTGTTCCTGCTCCGGCAATACATGCTGACCTTG
CCGAAAGACCTGATCGAGGCCGCGCGGATGGACAAGGCATCCGAATGGCAGATCTACTGGCGCATTGTGATGCCGCTGAC
CCTTCCGGCGCTGGCGGTGCTGGCGATCTTCTCGATCATGTGGCGCTGGAACGAATTCCTGTGGCCGCTCGCGGTGCTGA
CCAAGACCGAGGTGTACACGCTGCAGATCGCGCTCAACGCCTTCCAGGGCGAATTGCAGACGCAGTGGCACTATCTGCTG
GCGATGACGGTCGTGACGCTCGCGCCCGTCGCGCTGGTGTTCGTGTTCCTGCAGCGCTTCATCACCACGGGCATCGGCTC
GACCGGCATGAAATGA

Upstream 100 bases:

>100_bases
TTTCGGCCTCGCCGCCGCCGCCTCGGTGGTGCTCGGAATCGTGCTGTTCATCCTGACGCTGCTGCAATTCGCCGCTGCGC
GGCGGAAGGAGGTCTGAGCC

Downstream 100 bases:

>100_bases
GCAATCGGACGCTGAGCCATGGCTGACCTGAAACTCACCGGCGCGCGCAAGTCCTTCGGCCCCGTCGAGGTGCTGCACGG
CATCGATCTCGCCGTCCGGG

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MRLLSLLGQRRSGPGRKLHWTDIAAYAYLALGVVLMFGPVVWLVLSSFKTPSALLEFPPSLLPSAQVEVQVAGQPQPLPL
FRATLPDGSVRELAQLRRVGLIAQMVDPEDPLQQFRVAIDKREPVRRVAFATANYTEPLQRFAFLRFLFNSVFVTAVATL
ITLLINSMAAYALAVYAFPGKQAATLAVIGTLMIPITIVLVPVYLVVTELGLANSLWAVILPGAATPTGVFLLRQYMLTL
PKDLIEAARMDKASEWQIYWRIVMPLTLPALAVLAIFSIMWRWNEFLWPLAVLTKTEVYTLQIALNAFQGELQTQWHYLL
AMTVVTLAPVALVFVFLQRFITTGIGSTGMK

Sequences:

>Translated_351_residues
MRLLSLLGQRRSGPGRKLHWTDIAAYAYLALGVVLMFGPVVWLVLSSFKTPSALLEFPPSLLPSAQVEVQVAGQPQPLPL
FRATLPDGSVRELAQLRRVGLIAQMVDPEDPLQQFRVAIDKREPVRRVAFATANYTEPLQRFAFLRFLFNSVFVTAVATL
ITLLINSMAAYALAVYAFPGKQAATLAVIGTLMIPITIVLVPVYLVVTELGLANSLWAVILPGAATPTGVFLLRQYMLTL
PKDLIEAARMDKASEWQIYWRIVMPLTLPALAVLAIFSIMWRWNEFLWPLAVLTKTEVYTLQIALNAFQGELQTQWHYLL
AMTVVTLAPVALVFVFLQRFITTGIGSTGMK
>Mature_351_residues
MRLLSLLGQRRSGPGRKLHWTDIAAYAYLALGVVLMFGPVVWLVLSSFKTPSALLEFPPSLLPSAQVEVQVAGQPQPLPL
FRATLPDGSVRELAQLRRVGLIAQMVDPEDPLQQFRVAIDKREPVRRVAFATANYTEPLQRFAFLRFLFNSVFVTAVATL
ITLLINSMAAYALAVYAFPGKQAATLAVIGTLMIPITIVLVPVYLVVTELGLANSLWAVILPGAATPTGVFLLRQYMLTL
PKDLIEAARMDKASEWQIYWRIVMPLTLPALAVLAIFSIMWRWNEFLWPLAVLTKTEVYTLQIALNAFQGELQTQWHYLL
AMTVVTLAPVALVFVFLQRFITTGIGSTGMK

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=204, Percent_Identity=30.8823529411765, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787571, Length=212, Percent_Identity=29.2452830188679, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1790464, Length=221, Percent_Identity=29.8642533936652, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38984; Mature: 38984

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSLLGQRRSGPGRKLHWTDIAAYAYLALGVVLMFGPVVWLVLSSFKTPSALLEFPPS
CCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
LLPSAQVEVQVAGQPQPLPLFRATLPDGSVRELAQLRRVGLIAQMVDPEDPLQQFRVAID
CCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
KREPVRRVAFATANYTEPLQRFAFLRFLFNSVFVTAVATLITLLINSMAAYALAVYAFPG
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KQAATLAVIGTLMIPITIVLVPVYLVVTELGLANSLWAVILPGAATPTGVFLLRQYMLTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHEEECCCCCHHHHHHHHHHHHHC
PKDLIEAARMDKASEWQIYWRIVMPLTLPALAVLAIFSIMWRWNEFLWPLAVLTKTEVYT
CHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LQIALNAFQGELQTQWHYLLAMTVVTLAPVALVFVFLQRFITTGIGSTGMK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRLLSLLGQRRSGPGRKLHWTDIAAYAYLALGVVLMFGPVVWLVLSSFKTPSALLEFPPS
CCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
LLPSAQVEVQVAGQPQPLPLFRATLPDGSVRELAQLRRVGLIAQMVDPEDPLQQFRVAID
CCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
KREPVRRVAFATANYTEPLQRFAFLRFLFNSVFVTAVATLITLLINSMAAYALAVYAFPG
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KQAATLAVIGTLMIPITIVLVPVYLVVTELGLANSLWAVILPGAATPTGVFLLRQYMLTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHEEECCCCCHHHHHHHHHHHHHC
PKDLIEAARMDKASEWQIYWRIVMPLTLPALAVLAIFSIMWRWNEFLWPLAVLTKTEVYT
CHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LQIALNAFQGELQTQWHYLLAMTVVTLAPVALVFVFLQRFITTGIGSTGMK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]