| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341308
Identifier: 146341308
GI number: 146341308
Start: 4585042
End: 4585566
Strand: Reverse
Name: 146341308
Synonym: BRADO4389
Alternate gene names: NA
Gene position: 4585566-4585042 (Counterclockwise)
Preceding gene: 146341309
Following gene: 146341307
Centisome position: 61.5
GC content: 60.57
Gene sequence:
>525_bases ATGGCTTCTTTCAGCGTCAATGCGCAGCGTTTCGATCCCTACAAGAATTTCAAATTTCGCGTGAAGTGGGACGGCAAATA TGTCGCAGGCGTCAGCAAGGTCGGCGCGCTTAAGCGCACCACCGAGGTCGTCAAGCACCGCGAGGGCGGCGATCCGTCGA GCTCGCGCAAATCGCCCGGGCGGTCCGAATACGAGGCTCTCACGCTCGAACGCGGCGTCACCCATGACAAGGAGTTCGAG CAGTGGGCCAACAAGGTCTGGAACTTCGGCGCTGGCCTCGGGCAGGAGGTCTCGCTGAAGGACTTCCGCAAGGACATCAT CGTCGAGGTCTATAACGAGGCCGGGCAGCTCGCGATCGCCTACAAGATCTATCGCTGCTGGGTTTCGGAATTCCAGGCCG AGGCCGATCTCGATGCCAATGCCAACGCCGTGCTGATCCAGAGCATCAAGCTCGAGAATGAAGGATGGGAGCGCGACGTC GACGTCAGCGAGCCGTCGGAGCCGAGCTTCACCGTGCCGCAATAG
Upstream 100 bases:
>100_bases TGAACGTGCTGGTGGGATTTGCGCCGTTGAAGCCGGCTGAATTCGTCATCATCAGCATCCAGCAGATGGCCGGCCAGATT GCCACCTGAGGAGAGATCCA
Downstream 100 bases:
>100_bases CGCAGGTCTCCGCCCGATGTCGCAGCCCGCGCCAGTGAATCGAGCATCCGGGGCCGGATGCTGGTCGATTCCTCCCGCTA TGGATCGCATGTGAGGCAGG
Product: putative phage tail region protein
Products: NA
Alternate protein names: Phage Tail Region Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MASFSVNAQRFDPYKNFKFRVKWDGKYVAGVSKVGALKRTTEVVKHREGGDPSSSRKSPGRSEYEALTLERGVTHDKEFE QWANKVWNFGAGLGQEVSLKDFRKDIIVEVYNEAGQLAIAYKIYRCWVSEFQAEADLDANANAVLIQSIKLENEGWERDV DVSEPSEPSFTVPQ
Sequences:
>Translated_174_residues MASFSVNAQRFDPYKNFKFRVKWDGKYVAGVSKVGALKRTTEVVKHREGGDPSSSRKSPGRSEYEALTLERGVTHDKEFE QWANKVWNFGAGLGQEVSLKDFRKDIIVEVYNEAGQLAIAYKIYRCWVSEFQAEADLDANANAVLIQSIKLENEGWERDV DVSEPSEPSFTVPQ >Mature_173_residues ASFSVNAQRFDPYKNFKFRVKWDGKYVAGVSKVGALKRTTEVVKHREGGDPSSSRKSPGRSEYEALTLERGVTHDKEFEQ WANKVWNFGAGLGQEVSLKDFRKDIIVEVYNEAGQLAIAYKIYRCWVSEFQAEADLDANANAVLIQSIKLENEGWERDVD VSEPSEPSFTVPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19714; Mature: 19583
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFSVNAQRFDPYKNFKFRVKWDGKYVAGVSKVGALKRTTEVVKHREGGDPSSSRKSPG CCCCCCCHHHCCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RSEYEALTLERGVTHDKEFEQWANKVWNFGAGLGQEVSLKDFRKDIIVEVYNEAGQLAIA CCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH YKIYRCWVSEFQAEADLDANANAVLIQSIKLENEGWERDVDVSEPSEPSFTVPQ HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASFSVNAQRFDPYKNFKFRVKWDGKYVAGVSKVGALKRTTEVVKHREGGDPSSSRKSPG CCCCCCHHHCCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RSEYEALTLERGVTHDKEFEQWANKVWNFGAGLGQEVSLKDFRKDIIVEVYNEAGQLAIA CCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH YKIYRCWVSEFQAEADLDANANAVLIQSIKLENEGWERDVDVSEPSEPSFTVPQ HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA