| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341305
Identifier: 146341305
GI number: 146341305
Start: 4581982
End: 4583229
Strand: Reverse
Name: 146341305
Synonym: BRADO4386
Alternate gene names: NA
Gene position: 4583229-4581982 (Counterclockwise)
Preceding gene: 146341306
Following gene: 146341304
Centisome position: 61.47
GC content: 66.91
Gene sequence:
>1248_bases ATGAGTGATTTCCGCGCCATCGCAACCGTCACCGCGACGCTGCAGCGGGCGCTGCAGGCGGCGATCCAGGCCGACATCGC CGGCGCCACCGTCTCGACGGTGCGCCCGGCCGAGGGCACCAACACCCATCTGCCGACTGCGGGCGTGAACATCTATCTCT ATCAGGTCAGCCAGAATCCGCATCGCAGTAATCTCGATCTCCCGACGCGGCGCTCGGAGGGAGGCCTCGTGCAGCGCCCG CAGATCGCCCTCGATCTGCATTATCTGCTCAGCTTCTATGGTGACGACCTGACCCTCGAACCGCAGCGTCTGATGGGCAG CACGCTAGCGTTCCTGCACAGCCAGCCAATGATCACCCGGGCGCAGATCGAGGCCGTGGTGGCGGATGCGTCCAAGGCGT TTCTCGCACAATCCGATCTCGCCCGGCAGCCGGAGCTGGTGCGATTCACGCCGCTGACCATGTCGCTCGAGGAGCTGTCG CGGCTGTGGTCGGTTCTGCTTCAGGTGCAATATGTTCTGTCGGTCGCCTACAAGGCCTCGGTGGTGCTGGTCGAGCGCCA GCTCAAGCCGCAACCGGCGCTGCCGACGCGCGCTTTTAACCTCGCCGCCGTTCCGTTGCGCCAGCCCTTCATTCGTCAAG TCGTGGCCGACGCGGGCGAAGGCGTTCCGATCCGTCCGGGTGATCCCGTGCGCATTGCCGGGGTCGATCTGCAGGGGCAG GCGACCCAGGTGCTGGTTGACCAGGCGCAGGTCGCTCTCACGGACATCAGCAGCGATCACATCACCATCAACGTCCCGGC CATGCTCAGTGCCGGTCCCCATCGCGCGCAGGTCGTGCAAGGCGTCAGGTTCGATCCGGCGGGCACGCCGCGCATGGCCG TCCGGTCCAATCTCGGCACCTTCGTCGTTCATCCTGCGATCACCCAGACGGCCGGCAAACCCGACATCGCCATCACCAAT GTGCAGGGCGCGGGCGCCGCTCCGCGCTCCGCCTCGGTGACCGTCGGCGTGTCGCCACCTGTCGGCGCGGATCAGCTCGC GACGCTCGAACTGCTGCAGCAGCAGGAGACGATCTACACGTTCGCCGCCTTGACCCCGCGCGCCGCTCCGGCGGCCCAGC TGACCTTTCCGGTCAGCGGCGTCGCGGCCGGCGACTATCTGGTCCGCGTTCGCATCGACGGCGCCGAGAGCGCGTTGCAG CTCGATCCCAATCGCGTGCCGATCGGCCCCAAAGGAACGGTTCCATGA
Upstream 100 bases:
>100_bases TGCGTGCCGTCTATGCTCCGCCGGCCGTCGCCGAGCGAAAGCCGAGCGCGCGGCCGATGACGTCGCTCGATGACTATCTC AAGCAGCGTGACAAAGCCGG
Downstream 100 bases:
>100_bases CGGTCCATGGTCATGATTGGGTGATGCAGAACCAGGCCTACCTCACCGCGATGCTGGCGCGGGTGCGGCAGGCGCTGCAG CTGCATCTGCAAATGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSDFRAIATVTATLQRALQAAIQADIAGATVSTVRPAEGTNTHLPTAGVNIYLYQVSQNPHRSNLDLPTRRSEGGLVQRP QIALDLHYLLSFYGDDLTLEPQRLMGSTLAFLHSQPMITRAQIEAVVADASKAFLAQSDLARQPELVRFTPLTMSLEELS RLWSVLLQVQYVLSVAYKASVVLVERQLKPQPALPTRAFNLAAVPLRQPFIRQVVADAGEGVPIRPGDPVRIAGVDLQGQ ATQVLVDQAQVALTDISSDHITINVPAMLSAGPHRAQVVQGVRFDPAGTPRMAVRSNLGTFVVHPAITQTAGKPDIAITN VQGAGAAPRSASVTVGVSPPVGADQLATLELLQQQETIYTFAALTPRAAPAAQLTFPVSGVAAGDYLVRVRIDGAESALQ LDPNRVPIGPKGTVP
Sequences:
>Translated_415_residues MSDFRAIATVTATLQRALQAAIQADIAGATVSTVRPAEGTNTHLPTAGVNIYLYQVSQNPHRSNLDLPTRRSEGGLVQRP QIALDLHYLLSFYGDDLTLEPQRLMGSTLAFLHSQPMITRAQIEAVVADASKAFLAQSDLARQPELVRFTPLTMSLEELS RLWSVLLQVQYVLSVAYKASVVLVERQLKPQPALPTRAFNLAAVPLRQPFIRQVVADAGEGVPIRPGDPVRIAGVDLQGQ ATQVLVDQAQVALTDISSDHITINVPAMLSAGPHRAQVVQGVRFDPAGTPRMAVRSNLGTFVVHPAITQTAGKPDIAITN VQGAGAAPRSASVTVGVSPPVGADQLATLELLQQQETIYTFAALTPRAAPAAQLTFPVSGVAAGDYLVRVRIDGAESALQ LDPNRVPIGPKGTVP >Mature_414_residues SDFRAIATVTATLQRALQAAIQADIAGATVSTVRPAEGTNTHLPTAGVNIYLYQVSQNPHRSNLDLPTRRSEGGLVQRPQ IALDLHYLLSFYGDDLTLEPQRLMGSTLAFLHSQPMITRAQIEAVVADASKAFLAQSDLARQPELVRFTPLTMSLEELSR LWSVLLQVQYVLSVAYKASVVLVERQLKPQPALPTRAFNLAAVPLRQPFIRQVVADAGEGVPIRPGDPVRIAGVDLQGQA TQVLVDQAQVALTDISSDHITINVPAMLSAGPHRAQVVQGVRFDPAGTPRMAVRSNLGTFVVHPAITQTAGKPDIAITNV QGAGAAPRSASVTVGVSPPVGADQLATLELLQQQETIYTFAALTPRAAPAAQLTFPVSGVAAGDYLVRVRIDGAESALQL DPNRVPIGPKGTVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44137; Mature: 44006
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFRAIATVTATLQRALQAAIQADIAGATVSTVRPAEGTNTHLPTAGVNIYLYQVSQNP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCC HRSNLDLPTRRSEGGLVQRPQIALDLHYLLSFYGDDLTLEPQRLMGSTLAFLHSQPMITR CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCEEH AQIEAVVADASKAFLAQSDLARQPELVRFTPLTMSLEELSRLWSVLLQVQYVLSVAYKAS HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHE VVLVERQLKPQPALPTRAFNLAAVPLRQPFIRQVVADAGEGVPIRPGDPVRIAGVDLQGQ EEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC ATQVLVDQAQVALTDISSDHITINVPAMLSAGPHRAQVVQGVRFDPAGTPRMAVRSNLGT HHHHHHHHHHEEEEECCCCEEEEEECHHCCCCCCHHHHHCCCEECCCCCCHHHHHCCCCE FVVHPAITQTAGKPDIAITNVQGAGAAPRSASVTVGVSPPVGADQLATLELLQQQETIYT EEECCCHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEE FAALTPRAAPAAQLTFPVSGVAAGDYLVRVRIDGAESALQLDPNRVPIGPKGTVP EEECCCCCCCCCEEEECCCCEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure SDFRAIATVTATLQRALQAAIQADIAGATVSTVRPAEGTNTHLPTAGVNIYLYQVSQNP CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCC HRSNLDLPTRRSEGGLVQRPQIALDLHYLLSFYGDDLTLEPQRLMGSTLAFLHSQPMITR CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCEEH AQIEAVVADASKAFLAQSDLARQPELVRFTPLTMSLEELSRLWSVLLQVQYVLSVAYKAS HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHE VVLVERQLKPQPALPTRAFNLAAVPLRQPFIRQVVADAGEGVPIRPGDPVRIAGVDLQGQ EEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC ATQVLVDQAQVALTDISSDHITINVPAMLSAGPHRAQVVQGVRFDPAGTPRMAVRSNLGT HHHHHHHHHHEEEEECCCCEEEEEECHHCCCCCCHHHHHCCCEECCCCCCHHHHHCCCCE FVVHPAITQTAGKPDIAITNVQGAGAAPRSASVTVGVSPPVGADQLATLELLQQQETIYT EEECCCHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEE FAALTPRAAPAAQLTFPVSGVAAGDYLVRVRIDGAESALQLDPNRVPIGPKGTVP EEECCCCCCCCCEEEECCCCEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA