| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341302
Identifier: 146341302
GI number: 146341302
Start: 4573819
End: 4574472
Strand: Reverse
Name: 146341302
Synonym: BRADO4383
Alternate gene names: NA
Gene position: 4574472-4573819 (Counterclockwise)
Preceding gene: 146341303
Following gene: 146341301
Centisome position: 61.35
GC content: 64.98
Gene sequence:
>654_bases ATGACCTCCTCGCCCCTGGCTCCCCGCATCCTCAAAGGCGCGCTCGTCTCGGTGAGCGCGACCAGTCTCATCCCGTCGGT GATCGTCTTTCAGTACAATCCGGACACGCTGACGCGCTCGATCAAGCCGCGGGCGCCGGGTGGCGATGGCGCGCGGTCGG AGGCGATGCGGCTCACCGGGCCGCCCGAGGAGACGATCAAGGTCGACATCGAGATCGACGCCGTCGATCAGCTCGAAAGG AGCGACGGCATCGCCACCAGCCTCGGCATCTATCCGCAGCTGTCGGCGCTGGAAATGCTGACCTATCCGTCGAGCGCGAC GGTCATCGCCAACACCGTGCTGCTGGCGGCCGGCACCATCGAGATCGTGCCGGCCGATGCGCCGCTGACGCTGTTCATCT GGGGCGCCAAGCGCATCCTGCCGGTGCGCATCAGCGATTTCAGCATCACCGAGGAAGCCCACGACCAGGCGCTCAACCCG ATCCGGGCCAAGGTCGGGCTGGGGCTACGCGTGCTCGGCTACAATGATCTGTCGATCACCAATCCCGGCTACTACGTCTT CATGGCGCATCAGGTGGTCAAGGAGACGTTGAGCATCGTCGGGACGATCAGTGATCTGACCGCGGTGGCGGGCGGAAATG TCAGGATCCTCTAG
Upstream 100 bases:
>100_bases AGAGGTTGGCGAAGCTCGCGGTCGAACAATCGATAGGCGCGACCATGTCCAATCCGAGGAAAAAGCATCACGTGTTCGCT TCGACAGAGAATCGACTCAA
Downstream 100 bases:
>100_bases ATCGGGATTCTCGGGTTCATGTCGTGTTCGGGGCTGATCCTCTTGAAGTGCCCAAGTGACGTTAAATGCCCAAGTGACTT TTCCGGATCAGGCTCTCGGA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTSSPLAPRILKGALVSVSATSLIPSVIVFQYNPDTLTRSIKPRAPGGDGARSEAMRLTGPPEETIKVDIEIDAVDQLER SDGIATSLGIYPQLSALEMLTYPSSATVIANTVLLAAGTIEIVPADAPLTLFIWGAKRILPVRISDFSITEEAHDQALNP IRAKVGLGLRVLGYNDLSITNPGYYVFMAHQVVKETLSIVGTISDLTAVAGGNVRIL
Sequences:
>Translated_217_residues MTSSPLAPRILKGALVSVSATSLIPSVIVFQYNPDTLTRSIKPRAPGGDGARSEAMRLTGPPEETIKVDIEIDAVDQLER SDGIATSLGIYPQLSALEMLTYPSSATVIANTVLLAAGTIEIVPADAPLTLFIWGAKRILPVRISDFSITEEAHDQALNP IRAKVGLGLRVLGYNDLSITNPGYYVFMAHQVVKETLSIVGTISDLTAVAGGNVRIL >Mature_216_residues TSSPLAPRILKGALVSVSATSLIPSVIVFQYNPDTLTRSIKPRAPGGDGARSEAMRLTGPPEETIKVDIEIDAVDQLERS DGIATSLGIYPQLSALEMLTYPSSATVIANTVLLAAGTIEIVPADAPLTLFIWGAKRILPVRISDFSITEEAHDQALNPI RAKVGLGLRVLGYNDLSITNPGYYVFMAHQVVKETLSIVGTISDLTAVAGGNVRIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23037; Mature: 22906
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSPLAPRILKGALVSVSATSLIPSVIVFQYNPDTLTRSIKPRAPGGDGARSEAMRLTG CCCCCCCHHHHHHHHEEEEHHHHCCEEEEEEECCHHHHHCCCCCCCCCCCCCCCCEEECC PPEETIKVDIEIDAVDQLERSDGIATSLGIYPQLSALEMLTYPSSATVIANTVLLAAGTI CCCCEEEEEEEECHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCHHHHHEEEEEECEE EIVPADAPLTLFIWGAKRILPVRISDFSITEEAHDQALNPIRAKVGLGLRVLGYNDLSIT EEEECCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCEEEC NPGYYVFMAHQVVKETLSIVGTISDLTAVAGGNVRIL CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEC >Mature Secondary Structure TSSPLAPRILKGALVSVSATSLIPSVIVFQYNPDTLTRSIKPRAPGGDGARSEAMRLTG CCCCCCHHHHHHHHEEEEHHHHCCEEEEEEECCHHHHHCCCCCCCCCCCCCCCCEEECC PPEETIKVDIEIDAVDQLERSDGIATSLGIYPQLSALEMLTYPSSATVIANTVLLAAGTI CCCCEEEEEEEECHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCHHHHHEEEEEECEE EIVPADAPLTLFIWGAKRILPVRISDFSITEEAHDQALNPIRAKVGLGLRVLGYNDLSIT EEEECCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCEEEC NPGYYVFMAHQVVKETLSIVGTISDLTAVAGGNVRIL CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA