| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341293
Identifier: 146341293
GI number: 146341293
Start: 4561281
End: 4563860
Strand: Reverse
Name: 146341293
Synonym: BRADO4374
Alternate gene names: NA
Gene position: 4563860-4561281 (Counterclockwise)
Preceding gene: 146341294
Following gene: 146341292
Centisome position: 61.21
GC content: 65.43
Gene sequence:
>2580_bases ATGAAGGGCGATTTCAGCCGCGATACGTTTGATTCGACGAAGCATTACTCCAGCGTCCTGATGCAGCAGGGACGCGTGCA GCTCGATGCGGATTGGAACGAACAGCAGAGCATTCACCATCACCGCATCGCCACGGAGGCGCGCGACGTCATCGGCTTCT CCGGCGCTCCGTTGCACGCCGCCGGATTCAAGATCACGGTTGCGGCCGACAACCGCTCGCTGGTCATCGGTCAAGGCCGC TATTATGTCGACGGCCGGCTTTGCGAGAACGAAAGCGATGTCGGCTATGCGGCCCAGCCAGACCTGATCAATCCGCCGGA CATCGTCGCTGCGATGACCGCAGCTCAGGCGACGGCTGCGATCATCTATCTCGACGTCTGGTCGCGCAGCATCACTGCTC TCGACGATCCCATGATCCGCGAGACCGCGCTGGGCGGCCCTGATACCGCGGCCCGGATCAAGACGGTGTGGCAGGTCAAG GCGCTGGTGGCGAAGCCGGACGGCGGCGGCGGCTTTTCCTGCGGCGACCCGCTCAAGGCCTGGGATGATCTGACGACGCC AAGCAGCGGCGCGCTGAGCGCGCGCGCGCAGCCCGCCGCGTCGACCGACGGCCCGTGCCTTCTGCCGCCCGGCGCCGGCT TCCGGCGGCTCGAGAACCAGCTCTATCGAGTTGAGATTCATTCCGGCGGCGCGCTCGGGGCCTCGACCTTCAAATGGTCG CGCGACAACGGCGCCATCGTCACCGCGATCGACAGGATCAACGGCCAGGAGATCACGGTGCGTGATCTCGGCCGCGACGA CGTGCTCGGCTTCGCGAGCGGCCAATGGGTCGAGGTCTCCGATGAGTCTCGGGAGCTGTCCGGCGCGGCCGGGCAATTGG CGCAGATCGACACGATCGACGTCGCCAACCGCATTGTGACGCTCAAGCAGGCGGTCGCAGGCATCGATGCGACGCGCAAG CCGAGATTGCGCCGCTGGGACGGCGGCAGCACGACCGGGCTGCAGGTCGTGGTGCCCGCGACCAATGACGGTTGGATTCC GCTCGAGGACGGTGTCGAGGTGAAGTTCGCCGCCGGCAATTACGCGAGCGGCGACTATTGGCTGATCCCGGCCCGAACCC TGACTGGGGATGTGGAGTGGCCGTTCACAACACCACGTCTGCCCAGGGGTAAGCACAGTTATGCACGGCTTGCGGTGGTC ACTCTGGTCAACAGCGCATTGACGGTCCAGGACTGTCGCAACATCTTCACGCCCCTGGCAGAGCAGCCGCCCGCCATTCA TGTCAGGGGCGTCAATTGGCTCAACGACGACATTGTCGCGCCGGAGACCATCTTCAACGGGCTCAATGTCATGTTCGATA CGGCCGTCACGCCGCTATCGACCGACAGCTCCCTTGCGGTCGCGTCCCTGACCATGGACATGCCCATGGTGTTCGGCACC AATCCGCTGGGCGCGATGAATGTGGGACCCGGCGATGCGCCGGCCACCGCCGGCCTGGTCACCTTGTGCCTGAACGGCGA GTTGTCGCTGGCCGCGCGCGACATGCTGCAATGGAAACCTGCGAAGAACGGCGCCGAGCTCAGGGCGCTGATCGCCACCC TGGTGCAGCAGCGGATTTCGCGGGTGGGGCTGCGCTTCCGGCTCCGCGGCGGCGCGATCTGGCAGGAGGGCGGAACGGAA CTCCGCTATCTCGACGGTCAGGCGTTCGGCCAGAAGGGTACGCGGTCGGATTCCACGCCGCGCATCGACCTGCGCTTCCC GTCCGGCAGCGGGCGCCGGGTGAGCGATTTCGAGAGCTGGTTCTTTCTGCAACTCTCCTTGCCGCCATCGACACTGGTGA ACTTCACGCTCGACGCGCAGACGGTGATTGCCGGCGGCACCGTCACGGGCACCGTCACCCTCGACTTCTTGCCGACGGGA CCGGGCGCCAACATCGCATTGTCGTCCTCGGCGCCCAACGTGGTGACGTTCGTGAACCTGCCCAACAACAGCGTGAACGT GCCGCCGGGACGGCTCCAATCCAGCTTCCAGATCAAGACCAATGTCGTCACGGCGACCACCGAGGTGCTGATCAGCGCAA CCCTGGGAGCGGCGACACGACAGGTCAGGCTCTCCGTGCAGGTCGTCGGCGTGGTGATCTCGCCGCCGTCGCTGTCGACC TTCACGGGACGCTCGCAGCAGTTCTCCGCGACCGTGACTGGCGGCGTCAGCGATGCCTCGGTCAGCTGGAGCATCACGGA GCCGAATGGCGGCAGCATCAACTCGACCGGCCTCTATGTCGCGCCGGCGGCCGCGGGCACCTACCACGTGGTTGCGACCA GCGCCGCGGATCGCAGCAAGAGCGCGGCCGCCACGGTGCAGGTCACGATCAAGCCGAAGGAAAAGGAAAAGGACAAGGAT AAGGACAAGGAAAAGGAGGGCAAGGAGAAGGAACGATTCGAGGATACCCCCAAGATCCGCCGCGAAGTCCTGCTCGAGCA GCCGCGCCCGCTCGTCGTCGATCCCGTGCGCGACCAGCTGATCGATGCCGAGGGACGATCGTTCATCCTCGTCAATCAGC GACCGGTCATCAAGCCGTGA
Upstream 100 bases:
>100_bases GCGCGAGACAAATCTGCGGCTCCGCCTCAGCGAATACGCGCGTTTTGATCAAGAAGTCGGATTCATATTCGTCACCTGAG TTGACGGGGGAGTGCCAGCG
Downstream 100 bases:
>100_bases CGTCCGCGACCGACCCCGTCATCGTGCTCATCGCGAGCCGCGGCGATCCGGCTGCGGCCAGCTTCGCGGAGCGCGCCGGC GGCATCGTGCGTGTGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 859; Mature: 859
Protein sequence:
>859_residues MKGDFSRDTFDSTKHYSSVLMQQGRVQLDADWNEQQSIHHHRIATEARDVIGFSGAPLHAAGFKITVAADNRSLVIGQGR YYVDGRLCENESDVGYAAQPDLINPPDIVAAMTAAQATAAIIYLDVWSRSITALDDPMIRETALGGPDTAARIKTVWQVK ALVAKPDGGGGFSCGDPLKAWDDLTTPSSGALSARAQPAASTDGPCLLPPGAGFRRLENQLYRVEIHSGGALGASTFKWS RDNGAIVTAIDRINGQEITVRDLGRDDVLGFASGQWVEVSDESRELSGAAGQLAQIDTIDVANRIVTLKQAVAGIDATRK PRLRRWDGGSTTGLQVVVPATNDGWIPLEDGVEVKFAAGNYASGDYWLIPARTLTGDVEWPFTTPRLPRGKHSYARLAVV TLVNSALTVQDCRNIFTPLAEQPPAIHVRGVNWLNDDIVAPETIFNGLNVMFDTAVTPLSTDSSLAVASLTMDMPMVFGT NPLGAMNVGPGDAPATAGLVTLCLNGELSLAARDMLQWKPAKNGAELRALIATLVQQRISRVGLRFRLRGGAIWQEGGTE LRYLDGQAFGQKGTRSDSTPRIDLRFPSGSGRRVSDFESWFFLQLSLPPSTLVNFTLDAQTVIAGGTVTGTVTLDFLPTG PGANIALSSSAPNVVTFVNLPNNSVNVPPGRLQSSFQIKTNVVTATTEVLISATLGAATRQVRLSVQVVGVVISPPSLST FTGRSQQFSATVTGGVSDASVSWSITEPNGGSINSTGLYVAPAAAGTYHVVATSAADRSKSAAATVQVTIKPKEKEKDKD KDKEKEGKEKERFEDTPKIRREVLLEQPRPLVVDPVRDQLIDAEGRSFILVNQRPVIKP
Sequences:
>Translated_859_residues MKGDFSRDTFDSTKHYSSVLMQQGRVQLDADWNEQQSIHHHRIATEARDVIGFSGAPLHAAGFKITVAADNRSLVIGQGR YYVDGRLCENESDVGYAAQPDLINPPDIVAAMTAAQATAAIIYLDVWSRSITALDDPMIRETALGGPDTAARIKTVWQVK ALVAKPDGGGGFSCGDPLKAWDDLTTPSSGALSARAQPAASTDGPCLLPPGAGFRRLENQLYRVEIHSGGALGASTFKWS RDNGAIVTAIDRINGQEITVRDLGRDDVLGFASGQWVEVSDESRELSGAAGQLAQIDTIDVANRIVTLKQAVAGIDATRK PRLRRWDGGSTTGLQVVVPATNDGWIPLEDGVEVKFAAGNYASGDYWLIPARTLTGDVEWPFTTPRLPRGKHSYARLAVV TLVNSALTVQDCRNIFTPLAEQPPAIHVRGVNWLNDDIVAPETIFNGLNVMFDTAVTPLSTDSSLAVASLTMDMPMVFGT NPLGAMNVGPGDAPATAGLVTLCLNGELSLAARDMLQWKPAKNGAELRALIATLVQQRISRVGLRFRLRGGAIWQEGGTE LRYLDGQAFGQKGTRSDSTPRIDLRFPSGSGRRVSDFESWFFLQLSLPPSTLVNFTLDAQTVIAGGTVTGTVTLDFLPTG PGANIALSSSAPNVVTFVNLPNNSVNVPPGRLQSSFQIKTNVVTATTEVLISATLGAATRQVRLSVQVVGVVISPPSLST FTGRSQQFSATVTGGVSDASVSWSITEPNGGSINSTGLYVAPAAAGTYHVVATSAADRSKSAAATVQVTIKPKEKEKDKD KDKEKEGKEKERFEDTPKIRREVLLEQPRPLVVDPVRDQLIDAEGRSFILVNQRPVIKP >Mature_859_residues MKGDFSRDTFDSTKHYSSVLMQQGRVQLDADWNEQQSIHHHRIATEARDVIGFSGAPLHAAGFKITVAADNRSLVIGQGR YYVDGRLCENESDVGYAAQPDLINPPDIVAAMTAAQATAAIIYLDVWSRSITALDDPMIRETALGGPDTAARIKTVWQVK ALVAKPDGGGGFSCGDPLKAWDDLTTPSSGALSARAQPAASTDGPCLLPPGAGFRRLENQLYRVEIHSGGALGASTFKWS RDNGAIVTAIDRINGQEITVRDLGRDDVLGFASGQWVEVSDESRELSGAAGQLAQIDTIDVANRIVTLKQAVAGIDATRK PRLRRWDGGSTTGLQVVVPATNDGWIPLEDGVEVKFAAGNYASGDYWLIPARTLTGDVEWPFTTPRLPRGKHSYARLAVV TLVNSALTVQDCRNIFTPLAEQPPAIHVRGVNWLNDDIVAPETIFNGLNVMFDTAVTPLSTDSSLAVASLTMDMPMVFGT NPLGAMNVGPGDAPATAGLVTLCLNGELSLAARDMLQWKPAKNGAELRALIATLVQQRISRVGLRFRLRGGAIWQEGGTE LRYLDGQAFGQKGTRSDSTPRIDLRFPSGSGRRVSDFESWFFLQLSLPPSTLVNFTLDAQTVIAGGTVTGTVTLDFLPTG PGANIALSSSAPNVVTFVNLPNNSVNVPPGRLQSSFQIKTNVVTATTEVLISATLGAATRQVRLSVQVVGVVISPPSLST FTGRSQQFSATVTGGVSDASVSWSITEPNGGSINSTGLYVAPAAAGTYHVVATSAADRSKSAAATVQVTIKPKEKEKDKD KDKEKEGKEKERFEDTPKIRREVLLEQPRPLVVDPVRDQLIDAEGRSFILVNQRPVIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91867; Mature: 91867
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGDFSRDTFDSTKHYSSVLMQQGRVQLDADWNEQQSIHHHRIATEARDVIGFSGAPLHA CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE AGFKITVAADNRSLVIGQGRYYVDGRLCENESDVGYAAQPDLINPPDIVAAMTAAQATAA CCEEEEEEECCCEEEEECCEEEECCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEE IIYLDVWSRSITALDDPMIRETALGGPDTAARIKTVWQVKALVAKPDGGGGFSCGDPLKA EEEEEECCCCHHHCCCCHHHHHCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHH WDDLTTPSSGALSARAQPAASTDGPCLLPPGAGFRRLENQLYRVEIHSGGALGASTFKWS HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCEEEEEEEECCCCCCCCEEEEE RDNGAIVTAIDRINGQEITVRDLGRDDVLGFASGQWVEVSDESRELSGAAGQLAQIDTID CCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEEHHH VANRIVTLKQAVAGIDATRKPRLRRWDGGSTTGLQVVVPATNDGWIPLEDGVEVKFAAGN HHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEECCCCCEEEEECCC YASGDYWLIPARTLTGDVEWPFTTPRLPRGKHSYARLAVVTLVNSALTVQDCRNIFTPLA CCCCCEEEEECCEEECCCCCCCCCCCCCCCCCHHHHEEEEHHHCCCHHHHHHHHHHHHHH EQPPAIHVRGVNWLNDDIVAPETIFNGLNVMFDTAVTPLSTDSSLAVASLTMDMPMVFGT CCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEECC NPLGAMNVGPGDAPATAGLVTLCLNGELSLAARDMLQWKPAKNGAELRALIATLVQQRIS CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RVGLRFRLRGGAIWQEGGTELRYLDGQAFGQKGTRSDSTPRIDLRFPSGSGRRVSDFESW HCCEEEEEECCEEECCCCCEEEEECCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCE FFLQLSLPPSTLVNFTLDAQTVIAGGTVTGTVTLDFLPTGPGANIALSSSAPNVVTFVNL EEEEEECCHHHEEEEEECCEEEEECCEEEEEEEEEEEECCCCCCEEECCCCCCEEEEEEC PNNSVNVPPGRLQSSFQIKTNVVTATTEVLISATLGAATRQVRLSVQVVGVVISPPSLST CCCCCCCCHHHCCCCEEEEEEEEEEEHHEEEEHHHCCCEEEEEEEEEEEEEEECCCCCCC FTGRSQQFSATVTGGVSDASVSWSITEPNGGSINSTGLYVAPAAAGTYHVVATSAADRSK CCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC SAAATVQVTIKPKEKEKDKDKDKEKEGKEKERFEDTPKIRREVLLEQPRPLVVDPVRDQL CCEEEEEEEECCCHHCCCCCCCHHHCCCHHHHHCCCHHHHHHHHHCCCCCEEECCHHHHH IDAEGRSFILVNQRPVIKP CCCCCCEEEEECCCCCCCC >Mature Secondary Structure MKGDFSRDTFDSTKHYSSVLMQQGRVQLDADWNEQQSIHHHRIATEARDVIGFSGAPLHA CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE AGFKITVAADNRSLVIGQGRYYVDGRLCENESDVGYAAQPDLINPPDIVAAMTAAQATAA CCEEEEEEECCCEEEEECCEEEECCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEE IIYLDVWSRSITALDDPMIRETALGGPDTAARIKTVWQVKALVAKPDGGGGFSCGDPLKA EEEEEECCCCHHHCCCCHHHHHCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHH WDDLTTPSSGALSARAQPAASTDGPCLLPPGAGFRRLENQLYRVEIHSGGALGASTFKWS HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCEEEEEEEECCCCCCCCEEEEE RDNGAIVTAIDRINGQEITVRDLGRDDVLGFASGQWVEVSDESRELSGAAGQLAQIDTID CCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEEHHH VANRIVTLKQAVAGIDATRKPRLRRWDGGSTTGLQVVVPATNDGWIPLEDGVEVKFAAGN HHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEECCCCCEEEEECCC YASGDYWLIPARTLTGDVEWPFTTPRLPRGKHSYARLAVVTLVNSALTVQDCRNIFTPLA CCCCCEEEEECCEEECCCCCCCCCCCCCCCCCHHHHEEEEHHHCCCHHHHHHHHHHHHHH EQPPAIHVRGVNWLNDDIVAPETIFNGLNVMFDTAVTPLSTDSSLAVASLTMDMPMVFGT CCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEECC NPLGAMNVGPGDAPATAGLVTLCLNGELSLAARDMLQWKPAKNGAELRALIATLVQQRIS CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RVGLRFRLRGGAIWQEGGTELRYLDGQAFGQKGTRSDSTPRIDLRFPSGSGRRVSDFESW HCCEEEEEECCEEECCCCCEEEEECCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCE FFLQLSLPPSTLVNFTLDAQTVIAGGTVTGTVTLDFLPTGPGANIALSSSAPNVVTFVNL EEEEEECCHHHEEEEEECCEEEEECCEEEEEEEEEEEECCCCCCEEECCCCCCEEEEEEC PNNSVNVPPGRLQSSFQIKTNVVTATTEVLISATLGAATRQVRLSVQVVGVVISPPSLST CCCCCCCCHHHCCCCEEEEEEEEEEEHHEEEEHHHCCCEEEEEEEEEEEEEEECCCCCCC FTGRSQQFSATVTGGVSDASVSWSITEPNGGSINSTGLYVAPAAAGTYHVVATSAADRSK CCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCC SAAATVQVTIKPKEKEKDKDKDKEKEGKEKERFEDTPKIRREVLLEQPRPLVVDPVRDQL CCEEEEEEEECCCHHCCCCCCCHHHCCCHHHHHCCCHHHHHHHHHCCCCCEEECCHHHHH IDAEGRSFILVNQRPVIKP CCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA