| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340684
Identifier: 146340684
GI number: 146340684
Start: 3898020
End: 3898682
Strand: Direct
Name: 146340684
Synonym: BRADO3735
Alternate gene names: NA
Gene position: 3898020-3898682 (Clockwise)
Preceding gene: 146340683
Following gene: 146340685
Centisome position: 52.28
GC content: 61.54
Gene sequence:
>663_bases ATGGATGGATCTCGTCTCATGCTGAACTGGTTCCGCGCCGTCCTCCCCAAGGAGGAGCGGTTCTTCGATTTGTTCGCCCG CCACAACAAGGTGGTGATCCAGGGCGCCCATGCGCTTGTGGACATGCTCAAGGGCGGCGACGACGTGCTGACGCATTGCC AGCGCGTCAGCCAGTTCGAGAACGACGCCGACAACATCACCCGCGAGGTGCTGACCGCCGTCCGCCGCACCTTCATTACG CCGTTCGACCGCGGCGACATCAAGAACCTGATCACCTCGATGGACGACGCCATCGACCAGATGCAGCAGACCGCCAAGGC CGTGGTGCTGTTCGAGGTCAAGGCGTTCGAGCCGACGATGCGGGAGATGGGCACGCTCCTGGTCGACTGCGCCAATTTGA TCGGCCGCGCGTTGCCACTGTTGCAGGCCATCGGCCAGAACGTGCCGATGATCACTGCGATCACCGAGGAGATGACCAAG CTCGAGGGCCGCGTCGACGACCTCCACGATATCGGCCTGAAGGAGCTGTTCCTCAAGCACCGCAACGCCAACACCATGGA CTTCATCGTCGGCGCCGAGATCTACGACCATCTGGAGAAGGTCGCCGACCGCTTCGACGACGTCGCCAACGAGATCAATT CGATCATGATCGAACAGGTCTAG
Upstream 100 bases:
>100_bases GGAGAGGCAGAAAGCGGTGGATGAGCCGGCCACCGCTTCTGCTGCGGCGTGATCCGGAGTATGACAGTTCTGTGACGGGT CAGCCCTGGCCTGTTTCGGA
Downstream 100 bases:
>100_bases GGTAGGGCCGCGCCGTGGACGCTCAACTCGGCCTGCCCATCCTGGTCGGCCTCATCGCCGTCGCGCTCGCCTTCGACTTC CTGAACGGCCTGCACGACGC
Product: putative low-affinity phosphate transport accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MDGSRLMLNWFRAVLPKEERFFDLFARHNKVVIQGAHALVDMLKGGDDVLTHCQRVSQFENDADNITREVLTAVRRTFIT PFDRGDIKNLITSMDDAIDQMQQTAKAVVLFEVKAFEPTMREMGTLLVDCANLIGRALPLLQAIGQNVPMITAITEEMTK LEGRVDDLHDIGLKELFLKHRNANTMDFIVGAEIYDHLEKVADRFDDVANEINSIMIEQV
Sequences:
>Translated_220_residues MDGSRLMLNWFRAVLPKEERFFDLFARHNKVVIQGAHALVDMLKGGDDVLTHCQRVSQFENDADNITREVLTAVRRTFIT PFDRGDIKNLITSMDDAIDQMQQTAKAVVLFEVKAFEPTMREMGTLLVDCANLIGRALPLLQAIGQNVPMITAITEEMTK LEGRVDDLHDIGLKELFLKHRNANTMDFIVGAEIYDHLEKVADRFDDVANEINSIMIEQV >Mature_220_residues MDGSRLMLNWFRAVLPKEERFFDLFARHNKVVIQGAHALVDMLKGGDDVLTHCQRVSQFENDADNITREVLTAVRRTFIT PFDRGDIKNLITSMDDAIDQMQQTAKAVVLFEVKAFEPTMREMGTLLVDCANLIGRALPLLQAIGQNVPMITAITEEMTK LEGRVDDLHDIGLKELFLKHRNANTMDFIVGAEIYDHLEKVADRFDDVANEINSIMIEQV
Specific function: Could be involved in orthophosphate transport [H]
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 24976; Mature: 24976
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSRLMLNWFRAVLPKEERFFDLFARHNKVVIQGAHALVDMLKGGDDVLTHCQRVSQFE CCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEHHHHHHHHHHCCHHHHHHHHHHHHHC NDADNITREVLTAVRRTFITPFDRGDIKNLITSMDDAIDQMQQTAKAVVLFEVKAFEPTM CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REMGTLLVDCANLIGRALPLLQAIGQNVPMITAITEEMTKLEGRVDDLHDIGLKELFLKH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH RNANTMDFIVGAEIYDHLEKVADRFDDVANEINSIMIEQV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDGSRLMLNWFRAVLPKEERFFDLFARHNKVVIQGAHALVDMLKGGDDVLTHCQRVSQFE CCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEHHHHHHHHHHCCHHHHHHHHHHHHHC NDADNITREVLTAVRRTFITPFDRGDIKNLITSMDDAIDQMQQTAKAVVLFEVKAFEPTM CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REMGTLLVDCANLIGRALPLLQAIGQNVPMITAITEEMTKLEGRVDDLHDIGLKELFLKH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH RNANTMDFIVGAEIYDHLEKVADRFDDVANEINSIMIEQV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]