| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340666
Identifier: 146340666
GI number: 146340666
Start: 3879899
End: 3880981
Strand: Direct
Name: 146340666
Synonym: BRADO3716
Alternate gene names: NA
Gene position: 3879899-3880981 (Clockwise)
Preceding gene: 146340665
Following gene: 146340667
Centisome position: 52.03
GC content: 67.77
Gene sequence:
>1083_bases ATGAACCGACGGCAGATCCTGCTAGGAGCGAGCGGCGCGCTGACGGCGGCTGCGGTCGGCGCGGGCACCTGGCGCTCCGC GACCGGATCGATGTCCGCCTATGACGATTACAGCGCGCGGCTGCGCGCGCCGTTGTCGGGCGAGATCACCGACGTGATCC GCTACGCAACACTGGCCGCCAACGGCCACAACACGCAGCCATGGCGCTTCGCCGCATCAGCCGATGCCATCACGATCAAG CCCGACCCGTCGCGCCGCACGCCGGTGGTCGATCCCGACGATCATCATCTGTATGTCAGTCTCGGCTGTGCGGCGGCCAA CCTCGCGATCGCCGCCGCGGCCAGCGGCCGTCCGGGCGAACTGATCATCGATGGTCCGATGGTGCGCTACAACTTCACCG GCGGCCGGCGCGATGACGTCGATCCGCTGCTGGCCGCAATCGTCCGCCGACAGTCGACGCGCGCGGAGTATGACGGACGC GAGGTGGCGCCGCGCGACCTCACGGCTCTGCAGGTTGCTGCGGCCATTGCAGGTGTCGACCTCATCATCATTACGGCGCC CGCTGTCATCGCTGCGATCCGCGATCTCGTCGTGGCCGGCAACAGCGCGCAGATACGCGACATCGCGTTCATGCGCGAGC TCAAGGACTGGATCCGGTTCAATCCGCGCAGTGCGATGACGACGGGCGACGGCTTGTTGGCGGCGGCGAGCGGCAATCCG TCCTTGCCGACGACGCTGGGTGGCTTCGCCTTCGATCGCCTGTTCGATGCATCCGCCGAGAACGACAGATATGCGCGGCA GATCGCGTCATCGGCAGGACTTGCCGTGTTTGTTGCCGACCAGGCCGATCCCGCCCATTGGATCAGGGTCGGGCAGGCGT GCCAGCGCTTCGCGCTCGAGGCGACGCGACTCGGGCTGAAGCTCGCCTTCATCAACCAGCCGGTGGAGGTTGCCGCGTTG CGGCCCGAACTGGCGCGCCTGCTCGGGACGACGCGGCGACCGGATCTCGTGCTTCGCTTTGGCTACGGGCCCGCGCTGCC ATTCTCGCCGCGCCGGCCTGTCGATGCCGTGCTGAGTTCATGA
Upstream 100 bases:
>100_bases GCGAAGAATTTTGGTCGAAGGTGGTGCTGTTGATCTGAAGCAACACGGAGGCACGAGGCACGTTTATCCTCATCCTCATC AGTTCGGCGAGCATGTGGTC
Downstream 100 bases:
>100_bases GTCGTTCCTGTCAATCTTGACGGAGAGGCGACTCGGTGCATTGCTTCAGCGCATGTTCGAGAACACCCGATTGGCACGCA TGAGCGATGGGCATTATTGC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MNRRQILLGASGALTAAAVGAGTWRSATGSMSAYDDYSARLRAPLSGEITDVIRYATLAANGHNTQPWRFAASADAITIK PDPSRRTPVVDPDDHHLYVSLGCAAANLAIAAAASGRPGELIIDGPMVRYNFTGGRRDDVDPLLAAIVRRQSTRAEYDGR EVAPRDLTALQVAAAIAGVDLIIITAPAVIAAIRDLVVAGNSAQIRDIAFMRELKDWIRFNPRSAMTTGDGLLAAASGNP SLPTTLGGFAFDRLFDASAENDRYARQIASSAGLAVFVADQADPAHWIRVGQACQRFALEATRLGLKLAFINQPVEVAAL RPELARLLGTTRRPDLVLRFGYGPALPFSPRRPVDAVLSS
Sequences:
>Translated_360_residues MNRRQILLGASGALTAAAVGAGTWRSATGSMSAYDDYSARLRAPLSGEITDVIRYATLAANGHNTQPWRFAASADAITIK PDPSRRTPVVDPDDHHLYVSLGCAAANLAIAAAASGRPGELIIDGPMVRYNFTGGRRDDVDPLLAAIVRRQSTRAEYDGR EVAPRDLTALQVAAAIAGVDLIIITAPAVIAAIRDLVVAGNSAQIRDIAFMRELKDWIRFNPRSAMTTGDGLLAAASGNP SLPTTLGGFAFDRLFDASAENDRYARQIASSAGLAVFVADQADPAHWIRVGQACQRFALEATRLGLKLAFINQPVEVAAL RPELARLLGTTRRPDLVLRFGYGPALPFSPRRPVDAVLSS >Mature_360_residues MNRRQILLGASGALTAAAVGAGTWRSATGSMSAYDDYSARLRAPLSGEITDVIRYATLAANGHNTQPWRFAASADAITIK PDPSRRTPVVDPDDHHLYVSLGCAAANLAIAAAASGRPGELIIDGPMVRYNFTGGRRDDVDPLLAAIVRRQSTRAEYDGR EVAPRDLTALQVAAAIAGVDLIIITAPAVIAAIRDLVVAGNSAQIRDIAFMRELKDWIRFNPRSAMTTGDGLLAAASGNP SLPTTLGGFAFDRLFDASAENDRYARQIASSAGLAVFVADQADPAHWIRVGQACQRFALEATRLGLKLAFINQPVEVAAL RPELARLLGTTRRPDLVLRFGYGPALPFSPRRPVDAVLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 38323; Mature: 38323
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRQILLGASGALTAAAVGAGTWRSATGSMSAYDDYSARLRAPLSGEITDVIRYATLAA CCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHEEC NGHNTQPWRFAASADAITIKPDPSRRTPVVDPDDHHLYVSLGCAAANLAIAAAASGRPGE CCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCHHCEEEEEECCCCCCE LIIDGPMVRYNFTGGRRDDVDPLLAAIVRRQSTRAEYDGREVAPRDLTALQVAAAIAGVD EEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCE LIIITAPAVIAAIRDLVVAGNSAQIRDIAFMRELKDWIRFNPRSAMTTGDGLLAAASGNP EEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC SLPTTLGGFAFDRLFDASAENDRYARQIASSAGLAVFVADQADPAHWIRVGQACQRFALE CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH ATRLGLKLAFINQPVEVAALRPELARLLGTTRRPDLVLRFGYGPALPFSPRRPVDAVLSS HHHHCEEEEEECCCHHEECCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MNRRQILLGASGALTAAAVGAGTWRSATGSMSAYDDYSARLRAPLSGEITDVIRYATLAA CCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHEEC NGHNTQPWRFAASADAITIKPDPSRRTPVVDPDDHHLYVSLGCAAANLAIAAAASGRPGE CCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCHHCEEEEEECCCCCCE LIIDGPMVRYNFTGGRRDDVDPLLAAIVRRQSTRAEYDGREVAPRDLTALQVAAAIAGVD EEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCE LIIITAPAVIAAIRDLVVAGNSAQIRDIAFMRELKDWIRFNPRSAMTTGDGLLAAASGNP EEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC SLPTTLGGFAFDRLFDASAENDRYARQIASSAGLAVFVADQADPAHWIRVGQACQRFALE CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH ATRLGLKLAFINQPVEVAALRPELARLLGTTRRPDLVLRFGYGPALPFSPRRPVDAVLSS HHHHCEEEEEECCCHHEECCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]