| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340593
Identifier: 146340593
GI number: 146340593
Start: 3815910
End: 3817142
Strand: Direct
Name: 146340593
Synonym: BRADO3638
Alternate gene names: NA
Gene position: 3815910-3817142 (Clockwise)
Preceding gene: 146340592
Following gene: 146340594
Centisome position: 51.18
GC content: 65.37
Gene sequence:
>1233_bases ATGCCCTATCAGTCGAATTTCAACGCCCTGATTGCCTACAAGGCGCAGACGGGGCTCGGCACCGCGGCCAGCGGCGCTGG CGCCAATCAGCTGCGGCTCTCCGGTGGCCAGGGCGCGAAGCTCTCGAAGGCGGCGATCGTCTCCAACGAGCTGCGCAAGG ACGGCATGTCGACCCGCGGCCGCCACGGCACGCAGGGCGTCGTCGCCAGCTACAACGCTGAGGTGTCGCTCGGCTCGATC GACCCGATCATCCTCGCGATCATGCGCGCTGCGGCCTGGGACAGCTCGGTGCTCACCAAGACGCAGGCCGATTTCACCTC GCTGACGACCGGTGCGAATAGCATCGTGCTGGGGTCGGGCAATCCGATCACCATGGGCTATCGCGTCGGCGATGTCATTC GAGCCACGGGCCTGCCGGATGCCGCGAACAACGGCCGCAACATCCGTATTGCCGCGTTGTCGTCGACGACCATTACGACT GCCGAGACCCTGACCGTGAACGCCACGCCCGACACGACGTGCTCGATCACCAGGCCGGGCAAGCGGATCATCAATCCGGC CTCGCTGGTGCCGACCTATTTCACGCTCGAAGAGTATGAGGGCGATATCGACCAGTCGACCCTGGCGCAGGACTTCGTGT TCGGCGGCGTCAAGTTCTCGATGGCCGCCAACGGCCTGATGATGGCCGATGTCAGCGGCACCGGCACCGGCCAGATCCAG GCGCTCGGCACGGCGTCGTCGCCTTACTACACCTCGACCACGGCGCCATCTGATGTGCCGTTCTCGGTCGTCGACGCCAC CATCCGCGTCGGCGGCATCGACGTCGTCGAGCTGACCGGGCTCGACCTCACCATGAACATTCAGCCGACCGCCACGCCCG TGTTCGGCTCCGGCGCGCAGAAGTATTCACCCGACGTGTTCACGGGCGCGCTGCAGGTGTCGATGAACATCACGGCGCTG CGCAAGAGCCTGACCTATCTGTCGGACTTCATCGCCGAGACGCAGTATTCGCTGCAGATCCTCGCGGTCGACAACATGGC CGAGCCGAAGGATTTTCTGTCGATCTTCGTCCCGAACTTCACGCTCGGCGGCGTCGATCCCTCGGCCTTCTCCAAGCAGG GCGGCGGACGGACGCAGACGATCTCGATCCCGGCGGCGCTGGTCGGCGCCGCCACCAACACGGCCGCCGGCTTCGATCCG ACCATGATCTCGTTCCAGACCACGGCGCCTTAA
Upstream 100 bases:
>100_bases TCCGAAAGCGACGACGGCAACTACTTCGCCGTGACCGTCGTCATCCCCTTCGAATTCTACTGGATCGGCTGATCCGACCA GCAACGGAGAGAGCACGGCC
Downstream 100 bases:
>100_bases GGACCATCCATGACCAGCCAGGACACGCTCGATCTCGCCGCGCTCGACGCGCAGGACGAGGCCACGCTCGACATCCGCCA TCCCAAGTCGCTCGCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MPYQSNFNALIAYKAQTGLGTAASGAGANQLRLSGGQGAKLSKAAIVSNELRKDGMSTRGRHGTQGVVASYNAEVSLGSI DPIILAIMRAAAWDSSVLTKTQADFTSLTTGANSIVLGSGNPITMGYRVGDVIRATGLPDAANNGRNIRIAALSSTTITT AETLTVNATPDTTCSITRPGKRIINPASLVPTYFTLEEYEGDIDQSTLAQDFVFGGVKFSMAANGLMMADVSGTGTGQIQ ALGTASSPYYTSTTAPSDVPFSVVDATIRVGGIDVVELTGLDLTMNIQPTATPVFGSGAQKYSPDVFTGALQVSMNITAL RKSLTYLSDFIAETQYSLQILAVDNMAEPKDFLSIFVPNFTLGGVDPSAFSKQGGGRTQTISIPAALVGAATNTAAGFDP TMISFQTTAP
Sequences:
>Translated_410_residues MPYQSNFNALIAYKAQTGLGTAASGAGANQLRLSGGQGAKLSKAAIVSNELRKDGMSTRGRHGTQGVVASYNAEVSLGSI DPIILAIMRAAAWDSSVLTKTQADFTSLTTGANSIVLGSGNPITMGYRVGDVIRATGLPDAANNGRNIRIAALSSTTITT AETLTVNATPDTTCSITRPGKRIINPASLVPTYFTLEEYEGDIDQSTLAQDFVFGGVKFSMAANGLMMADVSGTGTGQIQ ALGTASSPYYTSTTAPSDVPFSVVDATIRVGGIDVVELTGLDLTMNIQPTATPVFGSGAQKYSPDVFTGALQVSMNITAL RKSLTYLSDFIAETQYSLQILAVDNMAEPKDFLSIFVPNFTLGGVDPSAFSKQGGGRTQTISIPAALVGAATNTAAGFDP TMISFQTTAP >Mature_409_residues PYQSNFNALIAYKAQTGLGTAASGAGANQLRLSGGQGAKLSKAAIVSNELRKDGMSTRGRHGTQGVVASYNAEVSLGSID PIILAIMRAAAWDSSVLTKTQADFTSLTTGANSIVLGSGNPITMGYRVGDVIRATGLPDAANNGRNIRIAALSSTTITTA ETLTVNATPDTTCSITRPGKRIINPASLVPTYFTLEEYEGDIDQSTLAQDFVFGGVKFSMAANGLMMADVSGTGTGQIQA LGTASSPYYTSTTAPSDVPFSVVDATIRVGGIDVVELTGLDLTMNIQPTATPVFGSGAQKYSPDVFTGALQVSMNITALR KSLTYLSDFIAETQYSLQILAVDNMAEPKDFLSIFVPNFTLGGVDPSAFSKQGGGRTQTISIPAALVGAATNTAAGFDPT MISFQTTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42452; Mature: 42321
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYQSNFNALIAYKAQTGLGTAASGAGANQLRLSGGQGAKLSKAAIVSNELRKDGMSTRG CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC RHGTQGVVASYNAEVSLGSIDPIILAIMRAAAWDSSVLTKTQADFTSLTTGANSIVLGSG CCCCCCEEEEECCEEEECCCCHHHHHHHHHHCCCCHHHEECCCCHHHCCCCCCEEEEECC NPITMGYRVGDVIRATGLPDAANNGRNIRIAALSSTTITTAETLTVNATPDTTCSITRPG CEEEEEEEECCEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEEEEECCCCCEEEEECCC KRIINPASLVPTYFTLEEYEGDIDQSTLAQDFVFGGVKFSMAANGLMMADVSGTGTGQIQ HHHCCCHHHCCEEEEEEHHCCCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCEEE ALGTASSPYYTSTTAPSDVPFSVVDATIRVGGIDVVELTGLDLTMNIQPTATPVFGSGAQ EEECCCCCEEECCCCCCCCCHHEEEEEEEECCEEEEEEECCEEEEECCCCCCCEECCCCC KYSPDVFTGALQVSMNITALRKSLTYLSDFIAETQYSLQILAVDNMAEPKDFLSIFVPNF CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHEEEECCC TLGGVDPSAFSKQGGGRTQTISIPAALVGAATNTAAGFDPTMISFQTTAP EECCCCHHHHHCCCCCCEEEEECCHHEEECCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure PYQSNFNALIAYKAQTGLGTAASGAGANQLRLSGGQGAKLSKAAIVSNELRKDGMSTRG CCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC RHGTQGVVASYNAEVSLGSIDPIILAIMRAAAWDSSVLTKTQADFTSLTTGANSIVLGSG CCCCCCEEEEECCEEEECCCCHHHHHHHHHHCCCCHHHEECCCCHHHCCCCCCEEEEECC NPITMGYRVGDVIRATGLPDAANNGRNIRIAALSSTTITTAETLTVNATPDTTCSITRPG CEEEEEEEECCEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEEEEECCCCCEEEEECCC KRIINPASLVPTYFTLEEYEGDIDQSTLAQDFVFGGVKFSMAANGLMMADVSGTGTGQIQ HHHCCCHHHCCEEEEEEHHCCCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCEEE ALGTASSPYYTSTTAPSDVPFSVVDATIRVGGIDVVELTGLDLTMNIQPTATPVFGSGAQ EEECCCCCEEECCCCCCCCCHHEEEEEEEECCEEEEEEECCEEEEECCCCCCCEECCCCC KYSPDVFTGALQVSMNITALRKSLTYLSDFIAETQYSLQILAVDNMAEPKDFLSIFVPNF CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHEEEECCC TLGGVDPSAFSKQGGGRTQTISIPAALVGAATNTAAGFDPTMISFQTTAP EECCCCHHHHHCCCCCCEEEEECCHHEEECCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA