| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146340577
Identifier: 146340577
GI number: 146340577
Start: 3802249
End: 3802785
Strand: Reverse
Name: 146340577
Synonym: BRADO3622
Alternate gene names: NA
Gene position: 3802785-3802249 (Counterclockwise)
Preceding gene: 146340580
Following gene: 146340562
Centisome position: 51.0
GC content: 55.87
Gene sequence:
>537_bases ATGGAAACACGCGCACGACCGATCCTGCGTCCGCTGATCTACGGATTGCCGCACTCGATTTCGACATTTGATCTCAAGGT GCTTTCCGGGTGGATCGGCAAGACCGTGATGGTCGGCGAGTACCTGCACCCCAATCACATAGCCATTCCCGACAGCGAAC GCCTGCGGATGTACGCGGAATTCGAATTACCGCCAACCTGGTCAATTTGGATTGCCGACTATCAAGGGTCAAAGTGGCGA AACCTCGCCATGTTCCACCACATGGGTCGTGTGGACCCAGACCCGACCGGGTCACTCCATCCGGACACGCACTTCACCAG CATCGGGATGGGTCGGCTGTTCATTCAGGCTGCGGCGACATCTAGTAGCACAACGATCGTGAACGAAAACGATGCTATGC GACAGATCTGGCCGTTGCCCAAAACAAACCTGAGCTGGCCTCCTGCCAGATTCATCGACGACGGTGAGGCCGACTTCATC GCAGATAGCTTCTCACGGGCAATGAATTTACCCCATGGGGGCAGTATACACATGTGA
Upstream 100 bases:
>100_bases GGTTTATTCGATGCCCACCCGAGCAATTCGCCAAGGGCATTCCGGAACAACCACAGTGCCGTTCGTTTGCGCCGGCTGCA ACAGCGGCTGGATGAGCCGA
Downstream 100 bases:
>100_bases GAAAGCCCGGCTCGAGACCGGGCTTTGGGCAGATTCCACCTTTTTTCCGCGAACCAGCGTTCTGGCTGGTGGCAGATGCG CCGGAGTGGTTAGCTCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues METRARPILRPLIYGLPHSISTFDLKVLSGWIGKTVMVGEYLHPNHIAIPDSERLRMYAEFELPPTWSIWIADYQGSKWR NLAMFHHMGRVDPDPTGSLHPDTHFTSIGMGRLFIQAAATSSSTTIVNENDAMRQIWPLPKTNLSWPPARFIDDGEADFI ADSFSRAMNLPHGGSIHM
Sequences:
>Translated_178_residues METRARPILRPLIYGLPHSISTFDLKVLSGWIGKTVMVGEYLHPNHIAIPDSERLRMYAEFELPPTWSIWIADYQGSKWR NLAMFHHMGRVDPDPTGSLHPDTHFTSIGMGRLFIQAAATSSSTTIVNENDAMRQIWPLPKTNLSWPPARFIDDGEADFI ADSFSRAMNLPHGGSIHM >Mature_178_residues METRARPILRPLIYGLPHSISTFDLKVLSGWIGKTVMVGEYLHPNHIAIPDSERLRMYAEFELPPTWSIWIADYQGSKWR NLAMFHHMGRVDPDPTGSLHPDTHFTSIGMGRLFIQAAATSSSTTIVNENDAMRQIWPLPKTNLSWPPARFIDDGEADFI ADSFSRAMNLPHGGSIHM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20111; Mature: 20111
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRARPILRPLIYGLPHSISTFDLKVLSGWIGKTVMVGEYLHPNHIAIPDSERLRMYAE CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCEEEEEE FELPPTWSIWIADYQGSKWRNLAMFHHMGRVDPDPTGSLHPDTHFTSIGMGRLFIQAAAT ECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECC SSSTTIVNENDAMRQIWPLPKTNLSWPPARFIDDGEADFIADSFSRAMNLPHGGSIHM CCCEEEEECCCCHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure METRARPILRPLIYGLPHSISTFDLKVLSGWIGKTVMVGEYLHPNHIAIPDSERLRMYAE CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCEEEEEE FELPPTWSIWIADYQGSKWRNLAMFHHMGRVDPDPTGSLHPDTHFTSIGMGRLFIQAAAT ECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECC SSSTTIVNENDAMRQIWPLPKTNLSWPPARFIDDGEADFIADSFSRAMNLPHGGSIHM CCCEEEEECCCCHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA