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The map label for this gene is citB [H]

Identifier: 146340464

GI number: 146340464

Start: 3686654

End: 3687757

Strand: Reverse

Name: citB [H]

Synonym: BRADO3504

Alternate gene names: 146340464

Gene position: 3687757-3686654 (Counterclockwise)

Preceding gene: 146340465

Following gene: 146340463

Centisome position: 49.46

GC content: 63.68

Gene sequence:

>1104_bases
ATGCAGCGCAGTGAGGCATTGACCGAAGCAGATCGCCTGATGACGATCTGCAATTCCTGCCGCTATTGCGAAGGACTCTG
CGCCGTGTTTCCGGCGATGGAGATGCGTCGCGCGTTCACGTCAGGCGACCTGAACTACTTCGCAAATCTGTGCCATTCCT
GCGGCGCCTGCTATGTCGATTGCCAGTTCTCGCCGCCGCACGAATTCGACGTCCGCGTCCCTGCCGTGCTCGCGCGCGTC
AGGCACGAGAGCTATGCCGATTACGCCTGGCCGCGCGCGCTCGCTCCGATCTTCAAGCGCAATGGACTGGCGATCGCGCT
CACGGCCGTGCTGAGCATGGCCGCTTTCATTCTCGGCTTCGTCGCCTTCAACGACCCAGCAGCGCTGTTCGCAACCCGCC
ATGGTCCTGGATCGTTCTATGCATTGATGCCGCACAACGCCATGGCGCTGGTGTTCGGCGCGGCGTTCCTGTGGGCCATC
GTCGCCTTCGTTCAGGGGACGCGCGCGTTCTGGAAGGACATCGGAGAGCCGCATGCGACGTTGGCCGAACCGCGCTCTCT
CCTGCGCGCGGTGCGTGACGCCGGCAGCCTGCGCTATCTCGATGGCGGCGGCGTCGGCTGCTACAACGAGGATGAGAAGC
CGGGCGATACCAGGCGCGTTTATCATCATCTGACGTTCTACGGATTCCTGCTCTGCTTCGCCTCCACCAGCGTCGCGACG
CTCTATCACTACCTGTTGCACCGCGAGGCGCCCTACCCGCTGTGGGATCTGCCGGTGGTGCTCGGCACCTTCGGCGGCCT
GGGTATCGTGATCGGTCCACTCGGCCTCTATGCCGCGAAACGCAGGCGCGAGCCGGAGATGATGGATGATCGCAGCCGCG
GCATGGACGTTGCGTTTCTGGCCATGCTGGTGCTGACCGGCGTGACCGGCCTGGGTCTGCTGTTGTTGCGCGAGACCGGC
GCAATGGGTCCGTTGCTTGCGCTACACCTTGGCGCTGTTTTCGCGCTCTTCGTCACCATGCCCTATGGCAAGTTCGTACA
CGGCCTCTATCGCTTCCTTGCCCTCGTTCGCTACGCCGGAGAGCGCCACCAGGTGTCGGTGTAG

Upstream 100 bases:

>100_bases
ATCATGGCCGGCAACGTGCTCGGCCGCGGCTATGCTGCCGGCATCGGCATGACCATCGGCAGCGTGTTCGGACGCATCGC
AGGCACGGGAGCAGCACGAC

Downstream 100 bases:

>100_bases
TCCGCCGGAACACACGGTCTCTCGCGGTTGGTCCCGCTTTTGTCATGCAGCATTCATGACTCTGAGCATCCGTTCATAAA
GTTGCGATCTGCGACATTTT

Product: putative citrate utilization protein B (citB) membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MQRSEALTEADRLMTICNSCRYCEGLCAVFPAMEMRRAFTSGDLNYFANLCHSCGACYVDCQFSPPHEFDVRVPAVLARV
RHESYADYAWPRALAPIFKRNGLAIALTAVLSMAAFILGFVAFNDPAALFATRHGPGSFYALMPHNAMALVFGAAFLWAI
VAFVQGTRAFWKDIGEPHATLAEPRSLLRAVRDAGSLRYLDGGGVGCYNEDEKPGDTRRVYHHLTFYGFLLCFASTSVAT
LYHYLLHREAPYPLWDLPVVLGTFGGLGIVIGPLGLYAAKRRREPEMMDDRSRGMDVAFLAMLVLTGVTGLGLLLLRETG
AMGPLLALHLGAVFALFVTMPYGKFVHGLYRFLALVRYAGERHQVSV

Sequences:

>Translated_367_residues
MQRSEALTEADRLMTICNSCRYCEGLCAVFPAMEMRRAFTSGDLNYFANLCHSCGACYVDCQFSPPHEFDVRVPAVLARV
RHESYADYAWPRALAPIFKRNGLAIALTAVLSMAAFILGFVAFNDPAALFATRHGPGSFYALMPHNAMALVFGAAFLWAI
VAFVQGTRAFWKDIGEPHATLAEPRSLLRAVRDAGSLRYLDGGGVGCYNEDEKPGDTRRVYHHLTFYGFLLCFASTSVAT
LYHYLLHREAPYPLWDLPVVLGTFGGLGIVIGPLGLYAAKRRREPEMMDDRSRGMDVAFLAMLVLTGVTGLGLLLLRETG
AMGPLLALHLGAVFALFVTMPYGKFVHGLYRFLALVRYAGERHQVSV
>Mature_367_residues
MQRSEALTEADRLMTICNSCRYCEGLCAVFPAMEMRRAFTSGDLNYFANLCHSCGACYVDCQFSPPHEFDVRVPAVLARV
RHESYADYAWPRALAPIFKRNGLAIALTAVLSMAAFILGFVAFNDPAALFATRHGPGSFYALMPHNAMALVFGAAFLWAI
VAFVQGTRAFWKDIGEPHATLAEPRSLLRAVRDAGSLRYLDGGGVGCYNEDEKPGDTRRVYHHLTFYGFLLCFASTSVAT
LYHYLLHREAPYPLWDLPVVLGTFGGLGIVIGPLGLYAAKRRREPEMMDDRSRGMDVAFLAMLVLTGVTGLGLLLLRETG
AMGPLLALHLGAVFALFVTMPYGKFVHGLYRFLALVRYAGERHQVSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012830 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40497; Mature: 40497

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSEALTEADRLMTICNSCRYCEGLCAVFPAMEMRRAFTSGDLNYFANLCHSCGACYVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEE
CQFSPPHEFDVRVPAVLARVRHESYADYAWPRALAPIFKRNGLAIALTAVLSMAAFILGF
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VAFNDPAALFATRHGPGSFYALMPHNAMALVFGAAFLWAIVAFVQGTRAFWKDIGEPHAT
HHCCCCHHEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAEPRSLLRAVRDAGSLRYLDGGGVGCYNEDEKPGDTRRVYHHLTFYGFLLCFASTSVAT
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYHYLLHREAPYPLWDLPVVLGTFGGLGIVIGPLGLYAAKRRREPEMMDDRSRGMDVAFL
HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHH
AMLVLTGVTGLGLLLLRETGAMGPLLALHLGAVFALFVTMPYGKFVHGLYRFLALVRYAG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
ERHQVSV
CCCCCCC
>Mature Secondary Structure
MQRSEALTEADRLMTICNSCRYCEGLCAVFPAMEMRRAFTSGDLNYFANLCHSCGACYVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEE
CQFSPPHEFDVRVPAVLARVRHESYADYAWPRALAPIFKRNGLAIALTAVLSMAAFILGF
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VAFNDPAALFATRHGPGSFYALMPHNAMALVFGAAFLWAIVAFVQGTRAFWKDIGEPHAT
HHCCCCHHEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAEPRSLLRAVRDAGSLRYLDGGGVGCYNEDEKPGDTRRVYHHLTFYGFLLCFASTSVAT
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYHYLLHREAPYPLWDLPVVLGTFGGLGIVIGPLGLYAAKRRREPEMMDDRSRGMDVAFL
HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHH
AMLVLTGVTGLGLLLLRETGAMGPLLALHLGAVFALFVTMPYGKFVHGLYRFLALVRYAG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
ERHQVSV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2999088; 3065141 [H]