Click here to switch to the map view.

The map label for this gene is phnA [H]

Identifier: 146340421

GI number: 146340421

Start: 3636990

End: 3637337

Strand: Reverse

Name: phnA [H]

Synonym: BRADO3457

Alternate gene names: 146340421

Gene position: 3637337-3636990 (Counterclockwise)

Preceding gene: 146340422

Following gene: 146340420

Centisome position: 48.78

GC content: 61.78

Gene sequence:

>348_bases
ATGACCGACGCGACGACCTGCCCGCAATGCCGCTCCGAGCACGCCTATCAGGACGGCGCGTTGTGGGTTTGTCCGGAGTG
CGGCCACGAATGGAGCGGCGACGCAGCCATTGCACCGGCTGAGGCCGATACCAGCATCCGCGATGCCAATGGCAACGTGC
TGACCGATGGCGACAGTGTCATCGTCATCAAGGACCTCAAGGTCAAGGGCTCATCCTCGACGGTCAAGGGCGGCACCAAG
GTGCGCAACATCCGTCTGCAGGAGGCCAGCGACGGCCACAACATCGCGTGCAAGATCGATGGCATCGGGCAGATAAATCT
CAAGTCGGAATTTGTCCGCAAGGCGTGA

Upstream 100 bases:

>100_bases
CAAAAGACTGCGCGCTGTCTCTCTTCCGGGATTTCACTTGCCCGGTTCCATTCCAGCCTCTAACGCTGCCGCACGCTTTC
TGCAGCGATCCGAGGATGAG

Downstream 100 bases:

>100_bases
GAACAGGCCGCTCCCGGAACATTCGAGACGCCACAGCGTTCGCATGAACAACGGGAGATGGCCATGCTGACGGACGACCA
GATCGCAACGCTTTCGGACA

Product: putative Zn-ribbon-containing protein involved in phosphonate metabolism, PhnA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTDATTCPQCRSEHAYQDGALWVCPECGHEWSGDAAIAPAEADTSIRDANGNVLTDGDSVIVIKDLKVKGSSSTVKGGTK
VRNIRLQEASDGHNIACKIDGIGQINLKSEFVRKA

Sequences:

>Translated_115_residues
MTDATTCPQCRSEHAYQDGALWVCPECGHEWSGDAAIAPAEADTSIRDANGNVLTDGDSVIVIKDLKVKGSSSTVKGGTK
VRNIRLQEASDGHNIACKIDGIGQINLKSEFVRKA
>Mature_114_residues
TDATTCPQCRSEHAYQDGALWVCPECGHEWSGDAAIAPAEADTSIRDANGNVLTDGDSVIVIKDLKVKGSSSTVKGGTKV
RNIRLQEASDGHNIACKIDGIGQINLKSEFVRKA

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=108, Percent_Identity=59.2592592592593, Blast_Score=134, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12215; Mature: 12084

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDATTCPQCRSEHAYQDGALWVCPECGHEWSGDAAIAPAEADTSIRDANGNVLTDGDSV
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCEEEECCCCEEECCCCE
IVIKDLKVKGSSSTVKGGTKVRNIRLQEASDGHNIACKIDGIGQINLKSEFVRKA
EEEEEEEECCCCCEECCCCEEEEEEEEECCCCCEEEEEECCCEEECCCHHHHHCC
>Mature Secondary Structure 
TDATTCPQCRSEHAYQDGALWVCPECGHEWSGDAAIAPAEADTSIRDANGNVLTDGDSV
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCEEEECCCCEEECCCCE
IVIKDLKVKGSSSTVKGGTKVRNIRLQEASDGHNIACKIDGIGQINLKSEFVRKA
EEEEEEEECCCCCEECCCCEEEEEEEEECCCCCEEEEEECCCEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]