| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340380
Identifier: 146340380
GI number: 146340380
Start: 3600793
End: 3602139
Strand: Direct
Name: 146340380
Synonym: BRADO3409
Alternate gene names: NA
Gene position: 3600793-3602139 (Clockwise)
Preceding gene: 146340379
Following gene: 146340381
Centisome position: 48.29
GC content: 63.77
Gene sequence:
>1347_bases ATGACGACGTTCAGACATGCGAAGCTGGCTTTGGGGGCGGCGCTCGCCCTCGGCCTCATGACCAGCCTGCCGGCCCTGAC GCGGCCCGCTCTGGCCGACGAGCAGTTCTTTCCGCTGCAGAGCTACCGCGTCGGGCCCTATGCGGCAGGCGGCACCGGCT TCTTTGGCGGCTTCATCGACTATCTCAATCTGATCAACACCCGCGACGGCGGCGTGAACGGGGTCAAGCTGACCTGGGAC GAGGGCGAGACGCAATATGAGGTCGAGCGCGGCGTCGAGGTCTATGAGCGGCTGAAGAGCCGGCCGGGTGTCGCCGCTTG GAATCCGCTCTCGGTCGGCATCGCCTATGCGATGATCGACCGCATCAGCAAGGACAAGGTGCCGCTGATCACCATCAATC ATGGCCGCACCGATTCCACCGACGGCCGCGTGTTCCCCTACGTGTTCCCGCTGCTGCTCAATCCCTATAGCGAGACCTCG GGCATCGTGAACTACATCGCCACGCGCGAGGGCGGGCCGGAGAAGCTGAAAGGCAAGAAGATCGTGGTGCTGTATCACGG CTCGCCTTACGGCAAGGAGACGATCCCGATCTACAAGCTGTTGTCGGACAAATACGGCTTCGAGCTCGAGCAGATCGAGG TGCCGCATCCCGGCAACGAGCAGCAGTCGCAATGGCTGTCGATCCGCCGCGCCAAGGCCGACTACGTCGTGCTGCGCGGC TGGGGCGTGATGAACCCGGTGGCGCTGAAGACCGCGCAGAAGACGGGCTTCCCGGTCGACCACATCATCGGCAACGTCTG GTCCAATTCGGAAGAAGACGTCATCCCCGCAGGCGATGCGGCCAAGGGCTATGTCGCGATCACGACGCAGGCTTCTGGCG CCGAATATCCGGTGCTGCAGGAGGTCATCAAGACCGTCTACGGCGCCGGCAAGGGCAATCTGGACGACAAGAAGCGCATC GGCAGCGTCTACCACAATCTCGGCATCGTGAACGGTATCCTCAACGTCGAGGCGGTCAGGATCGCGCAGGAGAAGTTCGG CAAGCGGACCTTGGCGGGCGACGAGGTGCGCTGGGGTTTTGAGCATCTCCAACTCGATCCCGCGCGGGTCGAGGCGCTCG GCGCCAAGGGCCTGTTCCACTCGATCAACGTCACCTGGGACAATCACGAGGGCAACGGCCGCGTGACTTTCCAGCAATGG GACGGCGCCAAGTGGAAGGTCGTCTCGGACTGGATCTCGCCGGACTGGGCGGCGCTGCGCCCGATCATCGAGAAGTCCTC GACGGCGTATGCGCAGGAGCGTGGCATCAAGATCCGCACCTCCGGTGACGATCCGGTCGGGCAGTAA
Upstream 100 bases:
>100_bases CGCGCGGCCTCGTCGCGCTGATCGACCGTGCGGCCGGCGCGCTGCGCCGCGTCCGTTCATCCCAGACCTGAAACACCGTC ACCACCACAAGGAGATCAAC
Downstream 100 bases:
>100_bases GAGCAGCATGCGCGGGAGCTGGTCTCCCGCGCACTGATCGGGGCCTCATGGTTCGAGACGGCGCTACGCGCCTCCTCACC ATGAGGGTTTCCATCTCGCC
Product: branched-chain amino acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MTTFRHAKLALGAALALGLMTSLPALTRPALADEQFFPLQSYRVGPYAAGGTGFFGGFIDYLNLINTRDGGVNGVKLTWD EGETQYEVERGVEVYERLKSRPGVAAWNPLSVGIAYAMIDRISKDKVPLITINHGRTDSTDGRVFPYVFPLLLNPYSETS GIVNYIATREGGPEKLKGKKIVVLYHGSPYGKETIPIYKLLSDKYGFELEQIEVPHPGNEQQSQWLSIRRAKADYVVLRG WGVMNPVALKTAQKTGFPVDHIIGNVWSNSEEDVIPAGDAAKGYVAITTQASGAEYPVLQEVIKTVYGAGKGNLDDKKRI GSVYHNLGIVNGILNVEAVRIAQEKFGKRTLAGDEVRWGFEHLQLDPARVEALGAKGLFHSINVTWDNHEGNGRVTFQQW DGAKWKVVSDWISPDWAALRPIIEKSSTAYAQERGIKIRTSGDDPVGQ
Sequences:
>Translated_448_residues MTTFRHAKLALGAALALGLMTSLPALTRPALADEQFFPLQSYRVGPYAAGGTGFFGGFIDYLNLINTRDGGVNGVKLTWD EGETQYEVERGVEVYERLKSRPGVAAWNPLSVGIAYAMIDRISKDKVPLITINHGRTDSTDGRVFPYVFPLLLNPYSETS GIVNYIATREGGPEKLKGKKIVVLYHGSPYGKETIPIYKLLSDKYGFELEQIEVPHPGNEQQSQWLSIRRAKADYVVLRG WGVMNPVALKTAQKTGFPVDHIIGNVWSNSEEDVIPAGDAAKGYVAITTQASGAEYPVLQEVIKTVYGAGKGNLDDKKRI GSVYHNLGIVNGILNVEAVRIAQEKFGKRTLAGDEVRWGFEHLQLDPARVEALGAKGLFHSINVTWDNHEGNGRVTFQQW DGAKWKVVSDWISPDWAALRPIIEKSSTAYAQERGIKIRTSGDDPVGQ >Mature_447_residues TTFRHAKLALGAALALGLMTSLPALTRPALADEQFFPLQSYRVGPYAAGGTGFFGGFIDYLNLINTRDGGVNGVKLTWDE GETQYEVERGVEVYERLKSRPGVAAWNPLSVGIAYAMIDRISKDKVPLITINHGRTDSTDGRVFPYVFPLLLNPYSETSG IVNYIATREGGPEKLKGKKIVVLYHGSPYGKETIPIYKLLSDKYGFELEQIEVPHPGNEQQSQWLSIRRAKADYVVLRGW GVMNPVALKTAQKTGFPVDHIIGNVWSNSEEDVIPAGDAAKGYVAITTQASGAEYPVLQEVIKTVYGAGKGNLDDKKRIG SVYHNLGIVNGILNVEAVRIAQEKFGKRTLAGDEVRWGFEHLQLDPARVEALGAKGLFHSINVTWDNHEGNGRVTFQQWD GAKWKVVSDWISPDWAALRPIIEKSSTAYAQERGIKIRTSGDDPVGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49301; Mature: 49170
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFRHAKLALGAALALGLMTSLPALTRPALADEQFFPLQSYRVGPYAAGGTGFFGGFID CCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHH YLNLINTRDGGVNGVKLTWDEGETQYEVERGVEVYERLKSRPGVAAWNPLSVGIAYAMID HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RISKDKVPLITINHGRTDSTDGRVFPYVFPLLLNPYSETSGIVNYIATREGGPEKLKGKK HHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCE IVVLYHGSPYGKETIPIYKLLSDKYGFELEQIEVPHPGNEQQSQWLSIRRAKADYVVLRG EEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC WGVMNPVALKTAQKTGFPVDHIIGNVWSNSEEDVIPAGDAAKGYVAITTQASGAEYPVLQ CCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH EVIKTVYGAGKGNLDDKKRIGSVYHNLGIVNGILNVEAVRIAQEKFGKRTLAGDEVRWGF HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCH EHLQLDPARVEALGAKGLFHSINVTWDNHEGNGRVTFQQWDGAKWKVVSDWISPDWAALR HHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHH PIIEKSSTAYAQERGIKIRTSGDDPVGQ HHHHCCCHHHHHHCCEEEEECCCCCCCC >Mature Secondary Structure TTFRHAKLALGAALALGLMTSLPALTRPALADEQFFPLQSYRVGPYAAGGTGFFGGFID CCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHH YLNLINTRDGGVNGVKLTWDEGETQYEVERGVEVYERLKSRPGVAAWNPLSVGIAYAMID HHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RISKDKVPLITINHGRTDSTDGRVFPYVFPLLLNPYSETSGIVNYIATREGGPEKLKGKK HHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCE IVVLYHGSPYGKETIPIYKLLSDKYGFELEQIEVPHPGNEQQSQWLSIRRAKADYVVLRG EEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC WGVMNPVALKTAQKTGFPVDHIIGNVWSNSEEDVIPAGDAAKGYVAITTQASGAEYPVLQ CCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH EVIKTVYGAGKGNLDDKKRIGSVYHNLGIVNGILNVEAVRIAQEKFGKRTLAGDEVRWGF HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCH EHLQLDPARVEALGAKGLFHSINVTWDNHEGNGRVTFQQWDGAKWKVVSDWISPDWAALR HHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHH PIIEKSSTAYAQERGIKIRTSGDDPVGQ HHHHCCCHHHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA