| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340374
Identifier: 146340374
GI number: 146340374
Start: 3594045
End: 3595085
Strand: Direct
Name: 146340374
Synonym: BRADO3402
Alternate gene names: NA
Gene position: 3594045-3595085 (Clockwise)
Preceding gene: 146340369
Following gene: 146340375
Centisome position: 48.2
GC content: 66.57
Gene sequence:
>1041_bases ATGGCTTCCAGTGAAGCAAGCGTGGACGTTCTGTTGTCGCAAAGCCGCTTCGGGCGCTCCGAAGCGATCGCATTGGTGCT TGCCGCACTTGCGATCGCCGCGGGCGCGGCGGCTTGGATCGGTGTCAGCGGCGAGCAGTCGCCCGGGGCCACGGCGGCGC TTCCTGAAGCTCCCCCGCCATCCATGACCTTCGAGAACCGCTTCGCGCCGGCCTCCGCCTCCGCGACAGCCTATTCGGAA AAAGACGCGGTGCGGGCGCTCGACCGGTTCGCGTTGCGCGGCATCGATCGGCAGCTTCTGGATGCGCGGGCCGCGCTGGT GCGCGGCATGGAATCGCGCGATCCGAATCAGCGCGATCCGAACAACAGCGATTGGCGTCCGATGCTGACCGAGGGCAACA TGGTCACGATGCCCGCGCCCGGCGTGCCGCTGCCGCGCCCGCGGCCGTCGGTCGCCAGCATGCCGACGAACCTGGTGTCG GCGAGCGCGCCGGAGGCGGTCGGCCGCGTCGACGACCGCTCGATCCTGCAGAAGCTGTCGGACCTGCTGCCGAGCCCGTC CAAATTCGCCTCGCTTGGTCCCGACAGCGGCATCGTGCGCTCGGGCATCGATCTCGGCGCGCTCGGATACGAAAAAACGG CGGTGTACGACATCAAGGCCAAGATGGTCTATCTGCCCTCGGGCATCGGGCTCGAAGCGCACTCCGGCATGGGCAACCTG CGCGACGACCCTGAGCACGTCAATCAGCGCATGGTCGGCGCGACGCCGCCTGCGACCTACGATCTGAAGCCGCGTGAAAA GCCGTTTCATGGCGTGCGCGCCCTGCGCATGAACGTGGTCGAGGGCACGACCCTCGGCCGCAGCGGATTGCTGACCCACC CCTATATGCTTGGTCCCGAGGGTGATTCGAACGGCTGCGTCTCGATCAAGAATTACGATCGCTTCCTGAAGGCGTATGAT GACGGCGAGTTCAACCGACTCGTCGTCGTCGTCGGGCTCGAGGCTGACACACCGACGCGGACCGCGCAAAAGACCGAGTG A
Upstream 100 bases:
>100_bases GCCGCACTCTTGCCATCCTATGTCATGACGGGTCGAATCGTACCCCTTGGGGTCGGACAGCTTCTGCGGGTGTTCGAAGA GGGGGTATATCGGGGACGTG
Downstream 100 bases:
>100_bases CGTTTCGTTGCTGGGCCCCGGCGCGACCACGGCGGCGACGCCAGTCGCATCTTCCGGAAGGTCCCCATGATTGATCCCGC ACGTTCCGAAACGCGTCTGC
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MASSEASVDVLLSQSRFGRSEAIALVLAALAIAAGAAAWIGVSGEQSPGATAALPEAPPPSMTFENRFAPASASATAYSE KDAVRALDRFALRGIDRQLLDARAALVRGMESRDPNQRDPNNSDWRPMLTEGNMVTMPAPGVPLPRPRPSVASMPTNLVS ASAPEAVGRVDDRSILQKLSDLLPSPSKFASLGPDSGIVRSGIDLGALGYEKTAVYDIKAKMVYLPSGIGLEAHSGMGNL RDDPEHVNQRMVGATPPATYDLKPREKPFHGVRALRMNVVEGTTLGRSGLLTHPYMLGPEGDSNGCVSIKNYDRFLKAYD DGEFNRLVVVVGLEADTPTRTAQKTE
Sequences:
>Translated_346_residues MASSEASVDVLLSQSRFGRSEAIALVLAALAIAAGAAAWIGVSGEQSPGATAALPEAPPPSMTFENRFAPASASATAYSE KDAVRALDRFALRGIDRQLLDARAALVRGMESRDPNQRDPNNSDWRPMLTEGNMVTMPAPGVPLPRPRPSVASMPTNLVS ASAPEAVGRVDDRSILQKLSDLLPSPSKFASLGPDSGIVRSGIDLGALGYEKTAVYDIKAKMVYLPSGIGLEAHSGMGNL RDDPEHVNQRMVGATPPATYDLKPREKPFHGVRALRMNVVEGTTLGRSGLLTHPYMLGPEGDSNGCVSIKNYDRFLKAYD DGEFNRLVVVVGLEADTPTRTAQKTE >Mature_345_residues ASSEASVDVLLSQSRFGRSEAIALVLAALAIAAGAAAWIGVSGEQSPGATAALPEAPPPSMTFENRFAPASASATAYSEK DAVRALDRFALRGIDRQLLDARAALVRGMESRDPNQRDPNNSDWRPMLTEGNMVTMPAPGVPLPRPRPSVASMPTNLVSA SAPEAVGRVDDRSILQKLSDLLPSPSKFASLGPDSGIVRSGIDLGALGYEKTAVYDIKAKMVYLPSGIGLEAHSGMGNLR DDPEHVNQRMVGATPPATYDLKPREKPFHGVRALRMNVVEGTTLGRSGLLTHPYMLGPEGDSNGCVSIKNYDRFLKAYDD GEFNRLVVVVGLEADTPTRTAQKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36794; Mature: 36663
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSEASVDVLLSQSRFGRSEAIALVLAALAIAAGAAAWIGVSGEQSPGATAALPEAPPP CCCCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCC SMTFENRFAPASASATAYSEKDAVRALDRFALRGIDRQLLDARAALVRGMESRDPNQRDP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC NNSDWRPMLTEGNMVTMPAPGVPLPRPRPSVASMPTNLVSASAPEAVGRVDDRSILQKLS CCCCCCEEEECCCEEEECCCCCCCCCCCCCHHHCCHHHHHCCCCHHHCCCCHHHHHHHHH DLLPSPSKFASLGPDSGIVRSGIDLGALGYEKTAVYDIKAKMVYLPSGIGLEAHSGMGNL HHCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEECCCCCCCC RDDPEHVNQRMVGATPPATYDLKPREKPFHGVRALRMNVVEGTTLGRSGLLTHPYMLGPE CCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC GDSNGCVSIKNYDRFLKAYDDGEFNRLVVVVGLEADTPTRTAQKTE CCCCCEEEEHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure ASSEASVDVLLSQSRFGRSEAIALVLAALAIAAGAAAWIGVSGEQSPGATAALPEAPPP CCCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCC SMTFENRFAPASASATAYSEKDAVRALDRFALRGIDRQLLDARAALVRGMESRDPNQRDP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC NNSDWRPMLTEGNMVTMPAPGVPLPRPRPSVASMPTNLVSASAPEAVGRVDDRSILQKLS CCCCCCEEEECCCEEEECCCCCCCCCCCCCHHHCCHHHHHCCCCHHHCCCCHHHHHHHHH DLLPSPSKFASLGPDSGIVRSGIDLGALGYEKTAVYDIKAKMVYLPSGIGLEAHSGMGNL HHCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEECCCCCCCC RDDPEHVNQRMVGATPPATYDLKPREKPFHGVRALRMNVVEGTTLGRSGLLTHPYMLGPE CCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC GDSNGCVSIKNYDRFLKAYDDGEFNRLVVVVGLEADTPTRTAQKTE CCCCCEEEEHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA