| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340327
Identifier: 146340327
GI number: 146340327
Start: 3546637
End: 3547218
Strand: Direct
Name: 146340327
Synonym: BRADO3353
Alternate gene names: NA
Gene position: 3546637-3547218 (Clockwise)
Preceding gene: 146340326
Following gene: 146340328
Centisome position: 47.56
GC content: 63.75
Gene sequence:
>582_bases GTGATGTCGAACCGCGATCTGTTCGGCGGCAGCGAGATGGATCCGCCGGTCCTGATGTGTGCAGACCTGCAGTGCGAATA TCTCGCCGAGGGACGCAAGCATCTGATCGCCGACGGGGACGTCATCATGGCGCGCTGCCGACAACTGATCGCGCTGTGGC GCGACAATCTATGGCCCGTCGTCCACCTCAAGCGGATCGCCCAGGCGGCGTGGTTCAACCCGGCCTCCAACTTGACGAAC TGGATCGACGACTTCAAGCCGAGGCCGAGTGAGATTGCGTTCGATCACCCATTGCCGTCGGCCTACAGCTCGGCGCGCTT TGCCGACTACATGTCGAACATGCGCAGCATCCGCTGCGTCGTGCTCGGCTTCTCGCTCGATGAGACGATCCTGTCCACGG TCGTCGACGGTTTCCATCGCAGCCATCGCTATCAGGTGATCGGTGATGCGGTCGCCTGCCGCAAGGCCTGCGCCGGCGAT GCCGCCGCCTACAAGCAAGTGGTCACTCGGGTGATCGGCAATTTCGCCGGCGTGCTCGACAGTGCCGAGCTGATTGGCGC GAGCGGGCGGCTGGCCGTCTGA
Upstream 100 bases:
>100_bases TCATCCGGCCCGAAGGTGATTGGGATCGGCCCGGCGTTCTGGATCTCTCGGCTGGCCGGCCGGCGTCCTCGCCGCTGCGT GACTTCGCCGCAGCGAGATC
Downstream 100 bases:
>100_bases GCGGTGCAGCGGCCTGGGTCATCGCCCGGCCAGTCGTTCGGCCAGCTCGATCACGAGGCGCCGGTCTGACGGATCGGTGA TCTTGTTGAACGCAACGACA
Product: putative hydrolase, isochorismatase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MMSNRDLFGGSEMDPPVLMCADLQCEYLAEGRKHLIADGDVIMARCRQLIALWRDNLWPVVHLKRIAQAAWFNPASNLTN WIDDFKPRPSEIAFDHPLPSAYSSARFADYMSNMRSIRCVVLGFSLDETILSTVVDGFHRSHRYQVIGDAVACRKACAGD AAAYKQVVTRVIGNFAGVLDSAELIGASGRLAV
Sequences:
>Translated_193_residues MMSNRDLFGGSEMDPPVLMCADLQCEYLAEGRKHLIADGDVIMARCRQLIALWRDNLWPVVHLKRIAQAAWFNPASNLTN WIDDFKPRPSEIAFDHPLPSAYSSARFADYMSNMRSIRCVVLGFSLDETILSTVVDGFHRSHRYQVIGDAVACRKACAGD AAAYKQVVTRVIGNFAGVLDSAELIGASGRLAV >Mature_193_residues MMSNRDLFGGSEMDPPVLMCADLQCEYLAEGRKHLIADGDVIMARCRQLIALWRDNLWPVVHLKRIAQAAWFNPASNLTN WIDDFKPRPSEIAFDHPLPSAYSSARFADYMSNMRSIRCVVLGFSLDETILSTVVDGFHRSHRYQVIGDAVACRKACAGD AAAYKQVVTRVIGNFAGVLDSAELIGASGRLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21350; Mature: 21350
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSNRDLFGGSEMDPPVLMCADLQCEYLAEGRKHLIADGDVIMARCRQLIALWRDNLWPV CCCCCCCCCCCCCCCCEEEECCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCHH VHLKRIAQAAWFNPASNLTNWIDDFKPRPSEIAFDHPLPSAYSSARFADYMSNMRSIRCV HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLGFSLDETILSTVVDGFHRSHRYQVIGDAVACRKACAGDAAAYKQVVTRVIGNFAGVLD EEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SAELIGASGRLAV HHHHHCCCCCCCC >Mature Secondary Structure MMSNRDLFGGSEMDPPVLMCADLQCEYLAEGRKHLIADGDVIMARCRQLIALWRDNLWPV CCCCCCCCCCCCCCCCEEEECCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCHH VHLKRIAQAAWFNPASNLTNWIDDFKPRPSEIAFDHPLPSAYSSARFADYMSNMRSIRCV HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLGFSLDETILSTVVDGFHRSHRYQVIGDAVACRKACAGDAAAYKQVVTRVIGNFAGVLD EEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SAELIGASGRLAV HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA