| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340253
Identifier: 146340253
GI number: 146340253
Start: 3474124
End: 3475398
Strand: Direct
Name: 146340253
Synonym: BRADO3274
Alternate gene names: NA
Gene position: 3474124-3475398 (Clockwise)
Preceding gene: 146340252
Following gene: 146340254
Centisome position: 46.59
GC content: 67.53
Gene sequence:
>1275_bases ATGATGCCCATGGCTCTCAGCACTCTCACTCTCAGTACTCTGACTCTCGGCACTCTCCGCGCCATTGTCTCGCGGCTGGC GGTCGTGCTCGTGGCGTCGCTGCAGCTTGGCGCCTGCGCCGCGATCGTGCCGCGCAACGCGCCGTCCGAGATGGCGGCCA TTCATGCCGAGCCGGTCGGCTTCCGCGACGTCCGTTATTGGGGCGATGAGCCGTCGCCGCGCATGGCGGAAGCCTCGTTG CAGCGCGCCTCGGCAGAACTGGCCGCGTCGCGTCCGATGAACTTTCTGGCGATCTCCGGCGGAGCGGAGAATGGCGCGTT CGGTGCCGGGCTTCTGTCGGGTTGGGGCGAGGCCGGCAGCCGGCCGACCTTCGACATGGTGACGGGCGTGAGCTCGGGCG CGCTCATGGCTCCGTTCGTGTTCCTGGGGCGAGCGCATGACGAGCGGCTGCGCGAGATCTTCACCGCCTATGAGCGCAAG GACATCTTCACCGTCAACATTCCCGGCCTGCTGCAGGGCTCGGCGCTGGCCGACAATACGCCGCTGTCGCGCCTGATCGA GAAATATGTCGACCGCGATTTCCTGCGCGACGTCGCCCGCGAGAGCGCCAAGGGCAGGGTGCTGCTGGTCGGCACCACCA ATCTCGACGCGCAGCGGCCGGTGCTGTGGGACATGGGCCGCATCGCCGCCGCCGACACGCCGGAGGCGATCGACCTGTTC CGCCAGGTGCTGCTTGCCTCCGCCACCGTGCCCGGCGCCTTCGCGCCGGTGCGCATCAAGGTGAGGATCGGCGACAAGGA TTACGACGAGCTGCATGTCGATGGCGGCGTCACGCGGCAGGTGTTCATCGGCCCGTCGGTGCTGCGCCTCGTCGCCGCAC GCGGTCCGCGACGCAGCGTCAGCGGCGCGCATCTCTACGTCATCCGAAACGCCCGGATCGATCCGGAATGGGACAGCGTC GGGGCCGACGTGCTGTCGGTGACGCAGCGCTCGCTGACGACCCTGATCAAGAACCAGGGCATCGGCGACATCTACCGGAT CTATACGGTGGCGAAGTTCAACAACATCGACTTCAACCTCGCCAGCGTGCCGGCGGATTTCCAGGTCAAGCCCAACGGCG CGTTCGACCGCACCTACATGACCGCCTTGTTCGATCGCGGCTTCGAGATGGGACGGCGCGGCTATCCCTGGGTGCGGAGC CTGCCGGGTCTGCAATCGAACGAGCATGGCCTCACGGCGCAGCTGTCTGCGCCCACGATGGCGGCGGCGCGATGA
Upstream 100 bases:
>100_bases GCCTGCCGCCGGGCTGGACCGACAAGGGCGCGGACGAGGCCAAGTCGTCCTCGCCGCCGCCTTCACCTGAAGTCGCGAGC ATGGAGCAGCAACCCACGCG
Downstream 100 bases:
>100_bases GCAGATCGGTGCGAGACTCCGGAGTGGTCGCCGCTGCGCGCGCGCTGCCTAGCGCAGCGGCCCTGCTGGCCACGCTGTTG CTCGCCGGCTGCGCGACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Patatin-Like Phospholipase Domain-Containing Protein; Phospholipase Patatin Family; Lipid Acyl Hydrolase Patatin-Like Domain; Patatin-Like Domain; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MMPMALSTLTLSTLTLGTLRAIVSRLAVVLVASLQLGACAAIVPRNAPSEMAAIHAEPVGFRDVRYWGDEPSPRMAEASL QRASAELAASRPMNFLAISGGAENGAFGAGLLSGWGEAGSRPTFDMVTGVSSGALMAPFVFLGRAHDERLREIFTAYERK DIFTVNIPGLLQGSALADNTPLSRLIEKYVDRDFLRDVARESAKGRVLLVGTTNLDAQRPVLWDMGRIAAADTPEAIDLF RQVLLASATVPGAFAPVRIKVRIGDKDYDELHVDGGVTRQVFIGPSVLRLVAARGPRRSVSGAHLYVIRNARIDPEWDSV GADVLSVTQRSLTTLIKNQGIGDIYRIYTVAKFNNIDFNLASVPADFQVKPNGAFDRTYMTALFDRGFEMGRRGYPWVRS LPGLQSNEHGLTAQLSAPTMAAAR
Sequences:
>Translated_424_residues MMPMALSTLTLSTLTLGTLRAIVSRLAVVLVASLQLGACAAIVPRNAPSEMAAIHAEPVGFRDVRYWGDEPSPRMAEASL QRASAELAASRPMNFLAISGGAENGAFGAGLLSGWGEAGSRPTFDMVTGVSSGALMAPFVFLGRAHDERLREIFTAYERK DIFTVNIPGLLQGSALADNTPLSRLIEKYVDRDFLRDVARESAKGRVLLVGTTNLDAQRPVLWDMGRIAAADTPEAIDLF RQVLLASATVPGAFAPVRIKVRIGDKDYDELHVDGGVTRQVFIGPSVLRLVAARGPRRSVSGAHLYVIRNARIDPEWDSV GADVLSVTQRSLTTLIKNQGIGDIYRIYTVAKFNNIDFNLASVPADFQVKPNGAFDRTYMTALFDRGFEMGRRGYPWVRS LPGLQSNEHGLTAQLSAPTMAAAR >Mature_424_residues MMPMALSTLTLSTLTLGTLRAIVSRLAVVLVASLQLGACAAIVPRNAPSEMAAIHAEPVGFRDVRYWGDEPSPRMAEASL QRASAELAASRPMNFLAISGGAENGAFGAGLLSGWGEAGSRPTFDMVTGVSSGALMAPFVFLGRAHDERLREIFTAYERK DIFTVNIPGLLQGSALADNTPLSRLIEKYVDRDFLRDVARESAKGRVLLVGTTNLDAQRPVLWDMGRIAAADTPEAIDLF RQVLLASATVPGAFAPVRIKVRIGDKDYDELHVDGGVTRQVFIGPSVLRLVAARGPRRSVSGAHLYVIRNARIDPEWDSV GADVLSVTQRSLTTLIKNQGIGDIYRIYTVAKFNNIDFNLASVPADFQVKPNGAFDRTYMTALFDRGFEMGRRGYPWVRS LPGLQSNEHGLTAQLSAPTMAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45858; Mature: 45858
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPMALSTLTLSTLTLGTLRAIVSRLAVVLVASLQLGACAAIVPRNAPSEMAAIHAEPVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHEEECCCCC FRDVRYWGDEPSPRMAEASLQRASAELAASRPMNFLAISGGAENGAFGAGLLSGWGEAGS CCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCC RPTFDMVTGVSSGALMAPFVFLGRAHDERLREIFTAYERKDIFTVNIPGLLQGSALADNT CCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC PLSRLIEKYVDRDFLRDVARESAKGRVLLVGTTNLDAQRPVLWDMGRIAAADTPEAIDLF CHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHH RQVLLASATVPGAFAPVRIKVRIGDKDYDELHVDGGVTRQVFIGPSVLRLVAARGPRRSV HHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHCCCCCCCC SGAHLYVIRNARIDPEWDSVGADVLSVTQRSLTTLIKNQGIGDIYRIYTVAKFNNIDFNL CCEEEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCCEEE ASVPADFQVKPNGAFDRTYMTALFDRGFEMGRRGYPWVRSLPGLQSNEHGLTAQLSAPTM ECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEECCCCH AAAR HCCC >Mature Secondary Structure MMPMALSTLTLSTLTLGTLRAIVSRLAVVLVASLQLGACAAIVPRNAPSEMAAIHAEPVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHEEECCCCC FRDVRYWGDEPSPRMAEASLQRASAELAASRPMNFLAISGGAENGAFGAGLLSGWGEAGS CCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCC RPTFDMVTGVSSGALMAPFVFLGRAHDERLREIFTAYERKDIFTVNIPGLLQGSALADNT CCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC PLSRLIEKYVDRDFLRDVARESAKGRVLLVGTTNLDAQRPVLWDMGRIAAADTPEAIDLF CHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHH RQVLLASATVPGAFAPVRIKVRIGDKDYDELHVDGGVTRQVFIGPSVLRLVAARGPRRSV HHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHCCCCCCCC SGAHLYVIRNARIDPEWDSVGADVLSVTQRSLTTLIKNQGIGDIYRIYTVAKFNNIDFNL CCEEEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCCEEE ASVPADFQVKPNGAFDRTYMTALFDRGFEMGRRGYPWVRSLPGLQSNEHGLTAQLSAPTM ECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEECCCCH AAAR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA