| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340037
Identifier: 146340037
GI number: 146340037
Start: 3244750
End: 3245979
Strand: Reverse
Name: 146340037
Synonym: BRADO3045
Alternate gene names: NA
Gene position: 3245979-3244750 (Counterclockwise)
Preceding gene: 146340043
Following gene: 146340036
Centisome position: 43.53
GC content: 64.47
Gene sequence:
>1230_bases ATGACCTTTGCCACGGGCAAGGGACGGACGTGCCTTGCCGCCGTCGGTCTCTTTGCCGGCCTTGCCCTCACCCTCACCGC CGCGCCTGCCCGCGCCCAGGCGCCGCTCAAGATCGGCGTGCTCAGCGACTTCTCGTCGGTCTATTCGGACATCGGCGGCC AGGGCAATCTCGAGGCAACCAAGCTCGCGATCGAGGAGTTCGGCGGCACCATGTTCGGCAAGCCGATCGAAGTGATCAGC GCCGATCCGCAGAACAAGGCCGACATCGCCGCCTCGATCGTGCGCAAATGGTACGAGAACGAGGCCGTCGACATGGTCAT CGACATGCCGACCTCGGCGACCGCACTCGCCGGCATGGAGATGTCGAAGCAGTTCGAGAAGCTGATGATCGTGACGGACG CCGCGAGCTCCGACATCACCGGCAAATCCTGCTCGCCCTACACCATCCACTGGACCTACGACACCTACGGCAACGCCCAC ACCGTGGGCCAGGCCATCGTCAAGACCGGCGGCGACAGCTGGTTCTTCATCACCGCCGACTATCTGTTCGGCCATTCGAT CGAGCGCGACACCGGCGACGTCGTGCGCGCGGCCGGCGGCAAGGTGGTCGGCAGCGCCAGGCATCCGCTCAACAACCAGG ACTTCTCGTCCTTCCTGCTGCAGGCGCAGGCCTCCAAGGCCAAGATCATCGGCATGGCCAATGGCGGCGGCGACACCATC AACACCATCAAGCAGGCGGCCGAGTTCGGCATCGTCGCCGGCGGCCAGAACCTCGCCGGCATCGTGATGTTCATCTCCGA CATCCACAGCCTCGGCCTGAAGCTCGCGCAGGGCCTGATCATCACCGAGGCCTATTATTGGGATCTCAACGACCGCACCC GCGCCTTCGGCAAGAGGTTCTTCGACAAGATGAAGCGGATGCCGACGATGAACCAGGCCGCGACCTACAGCGCCACCCTG CACTATCTCAACGCGGTGAAGGCCGCTGGTACCCGCGACACCAAGCCGGTGCTCGCCAAGATGCGCGAGACCCCCGTGCG CGACGCCTTCACCGACAATGGCGTCGTCCGCGAGGACGGCCGCATGGTGCACTCGATGTTCCTGTTCGAGGTCAAGAAGC CGGAGGAGTCGAAGGGCCCGTGGGACTATTACAAGGTGCTCGCCGAGGTGCCCGGCGACCAGGCGTTCCGGCCGCTGAAG GACGGCAATTGTCCCTACGTGAAGCAATAG
Upstream 100 bases:
>100_bases GTGCCGAGACGAAATGCCCGTGACGAGGCGGTTCCGGCCCTTGCCGCGCCCGCGACAGCCGCTCATGCTCGCGGGCACAA TAATAACCAGGAGGAAACCC
Downstream 100 bases:
>100_bases GGCCCCGCCAAAACGCATTCGGGGCTCGCGCATCGCGGGCCCCGGGCAAACCGTCTTCGTCGATTTTTGAGTTAAGTGCT TGATCTCGCTGGCAGGAGTG
Product: putative branched-chain amino acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein; ABC Transporter Subunit
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTFATGKGRTCLAAVGLFAGLALTLTAAPARAQAPLKIGVLSDFSSVYSDIGGQGNLEATKLAIEEFGGTMFGKPIEVIS ADPQNKADIAASIVRKWYENEAVDMVIDMPTSATALAGMEMSKQFEKLMIVTDAASSDITGKSCSPYTIHWTYDTYGNAH TVGQAIVKTGGDSWFFITADYLFGHSIERDTGDVVRAAGGKVVGSARHPLNNQDFSSFLLQAQASKAKIIGMANGGGDTI NTIKQAAEFGIVAGGQNLAGIVMFISDIHSLGLKLAQGLIITEAYYWDLNDRTRAFGKRFFDKMKRMPTMNQAATYSATL HYLNAVKAAGTRDTKPVLAKMRETPVRDAFTDNGVVREDGRMVHSMFLFEVKKPEESKGPWDYYKVLAEVPGDQAFRPLK DGNCPYVKQ
Sequences:
>Translated_409_residues MTFATGKGRTCLAAVGLFAGLALTLTAAPARAQAPLKIGVLSDFSSVYSDIGGQGNLEATKLAIEEFGGTMFGKPIEVIS ADPQNKADIAASIVRKWYENEAVDMVIDMPTSATALAGMEMSKQFEKLMIVTDAASSDITGKSCSPYTIHWTYDTYGNAH TVGQAIVKTGGDSWFFITADYLFGHSIERDTGDVVRAAGGKVVGSARHPLNNQDFSSFLLQAQASKAKIIGMANGGGDTI NTIKQAAEFGIVAGGQNLAGIVMFISDIHSLGLKLAQGLIITEAYYWDLNDRTRAFGKRFFDKMKRMPTMNQAATYSATL HYLNAVKAAGTRDTKPVLAKMRETPVRDAFTDNGVVREDGRMVHSMFLFEVKKPEESKGPWDYYKVLAEVPGDQAFRPLK DGNCPYVKQ >Mature_408_residues TFATGKGRTCLAAVGLFAGLALTLTAAPARAQAPLKIGVLSDFSSVYSDIGGQGNLEATKLAIEEFGGTMFGKPIEVISA DPQNKADIAASIVRKWYENEAVDMVIDMPTSATALAGMEMSKQFEKLMIVTDAASSDITGKSCSPYTIHWTYDTYGNAHT VGQAIVKTGGDSWFFITADYLFGHSIERDTGDVVRAAGGKVVGSARHPLNNQDFSSFLLQAQASKAKIIGMANGGGDTIN TIKQAAEFGIVAGGQNLAGIVMFISDIHSLGLKLAQGLIITEAYYWDLNDRTRAFGKRFFDKMKRMPTMNQAATYSATLH YLNAVKAAGTRDTKPVLAKMRETPVRDAFTDNGVVREDGRMVHSMFLFEVKKPEESKGPWDYYKVLAEVPGDQAFRPLKD GNCPYVKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44238; Mature: 44107
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFATGKGRTCLAAVGLFAGLALTLTAAPARAQAPLKIGVLSDFSSVYSDIGGQGNLEAT CCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHH KLAIEEFGGTMFGKPIEVISADPQNKADIAASIVRKWYENEAVDMVIDMPTSATALAGME HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH MSKQFEKLMIVTDAASSDITGKSCSPYTIHWTYDTYGNAHTVGQAIVKTGGDSWFFITAD HHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEH YLFGHSIERDTGDVVRAAGGKVVGSARHPLNNQDFSSFLLQAQASKAKIIGMANGGGDTI HHHCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHH NTIKQAAEFGIVAGGQNLAGIVMFISDIHSLGLKLAQGLIITEAYYWDLNDRTRAFGKRF HHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHH FDKMKRMPTMNQAATYSATLHYLNAVKAAGTRDTKPVLAKMRETPVRDAFTDNGVVREDG HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCEEECCC RMVHSMFLFEVKKPEESKGPWDYYKVLAEVPGDQAFRPLKDGNCPYVKQ HHEEHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFATGKGRTCLAAVGLFAGLALTLTAAPARAQAPLKIGVLSDFSSVYSDIGGQGNLEAT CCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHH KLAIEEFGGTMFGKPIEVISADPQNKADIAASIVRKWYENEAVDMVIDMPTSATALAGME HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH MSKQFEKLMIVTDAASSDITGKSCSPYTIHWTYDTYGNAHTVGQAIVKTGGDSWFFITAD HHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEH YLFGHSIERDTGDVVRAAGGKVVGSARHPLNNQDFSSFLLQAQASKAKIIGMANGGGDTI HHHCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHH NTIKQAAEFGIVAGGQNLAGIVMFISDIHSLGLKLAQGLIITEAYYWDLNDRTRAFGKRF HHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHH FDKMKRMPTMNQAATYSATLHYLNAVKAAGTRDTKPVLAKMRETPVRDAFTDNGVVREDG HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCEEECCC RMVHSMFLFEVKKPEESKGPWDYYKVLAEVPGDQAFRPLKDGNCPYVKQ HHEEHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA