BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is fabG [H]

Identifier: 146340033

GI number: 146340033

Start: 3240086

End: 3240871

Strand: Reverse

Name: fabG [H]

Synonym: BRADO3041

Alternate gene names: 146340033

Gene position: 3240871-3240086 (Counterclockwise)

Preceding gene: 146340036

Following gene: 146340031

Centisome position: 43.46

GC content: 67.56

Gene sequence:

>786_bases
ATGGGCCGCCTCGAAGGCAAATCCGTCATCATCACCGGCGCCGGCAGCGGCATCGGCCGCGCCGCGTCCCTGATGTTCAC
GAAGGAAGGCGCGCGGCTGATCGCGGTCGATCGTACCGAAGGCGTCAAGGAGACGGTCGAACTTGTGAAGCAGCAGGGCG
GCATCGCGGAAGCGGTGATGGCCGACGCCGGATCCGAGGCCGACATCTCCGGCTTCATCGATCGCGCGGTGGCGACCTAT
GGGAAGCTCGACGTGATCTGGGCGAATGCCGGCATCTCCGGCGGGCTGAAGCCGATCGCCGAGCAGACCGTGGAGCACTG
GCAGGAGATCCTGCGCGTCAACCTGATCGGCCCGTTCCTGGCGGTGAAATACGCGATGCCGCACATGGTCCGGCAGCAGC
GCGGCGCGATCGTCTGCACCGCTTCGGTCGCCGGCCTGAAGTCCGGCGCCTCCGGCCATCCCTACGCCGCCAGCAAGGCC
GGCGTCATCAGCCTGGTGCAGACCACCGCCTATTCGCTGTCCGGCACCGGCGTGCGCATCAACGCGGTCTGTCCCGGCCT
GATCGAGACCGGAATGACCAAGCCGATCTTCGACGGCGCCAAGGAGCGCGGCACCGAGGGCAAGATCGGTCAGCTCAATC
CGCTGAAGCGTGCAGGCCAGCCGCACGAGATCGCCGCCATGGCCCTGTTCCTCGCCAGCGACGAAGCTTCCTACGTCAAC
GGCCAGGCCTTCCCGGTCGACGGCGGCCTCACGGCGTCGATGCCGTATGCGGGCAAGCCGATCTAG

Upstream 100 bases:

>100_bases
TCAGTCGTCTCAAGCCGCTTGGCGATCCCGGCATGTTTGAAACGGCGTTCGAATTCCGTTGCGCGGGACGCAACTGATCA
ACAACGACACAGGAGGAAAT

Downstream 100 bases:

>100_bases
CCGAGTTGCCGCCTCGCTCTCCGCCGCCGTCCCGGCGAAAGCGGGGACCCATAACCACCGGCGGGAGTGAGGTCGGCAAC
TGACAGCGACATCCCCCGAG

Product: putative short-chain dehydrogenase/reductase SDR family protein

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGRLEGKSVIITGAGSGIGRAASLMFTKEGARLIAVDRTEGVKETVELVKQQGGIAEAVMADAGSEADISGFIDRAVATY
GKLDVIWANAGISGGLKPIAEQTVEHWQEILRVNLIGPFLAVKYAMPHMVRQQRGAIVCTASVAGLKSGASGHPYAASKA
GVISLVQTTAYSLSGTGVRINAVCPGLIETGMTKPIFDGAKERGTEGKIGQLNPLKRAGQPHEIAAMALFLASDEASYVN
GQAFPVDGGLTASMPYAGKPI

Sequences:

>Translated_261_residues
MGRLEGKSVIITGAGSGIGRAASLMFTKEGARLIAVDRTEGVKETVELVKQQGGIAEAVMADAGSEADISGFIDRAVATY
GKLDVIWANAGISGGLKPIAEQTVEHWQEILRVNLIGPFLAVKYAMPHMVRQQRGAIVCTASVAGLKSGASGHPYAASKA
GVISLVQTTAYSLSGTGVRINAVCPGLIETGMTKPIFDGAKERGTEGKIGQLNPLKRAGQPHEIAAMALFLASDEASYVN
GQAFPVDGGLTASMPYAGKPI
>Mature_260_residues
GRLEGKSVIITGAGSGIGRAASLMFTKEGARLIAVDRTEGVKETVELVKQQGGIAEAVMADAGSEADISGFIDRAVATYG
KLDVIWANAGISGGLKPIAEQTVEHWQEILRVNLIGPFLAVKYAMPHMVRQQRGAIVCTASVAGLKSGASGHPYAASKAG
VISLVQTTAYSLSGTGVRINAVCPGLIETGMTKPIFDGAKERGTEGKIGQLNPLKRAGQPHEIAAMALFLASDEASYVNG
QAFPVDGGLTASMPYAGKPI

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-26,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=27.4193548387097, Blast_Score=114, Evalue=6e-26,
Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=32.1138211382114, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=29.9559471365639, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=27.4193548387097, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=27.027027027027, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4504505, Length=264, Percent_Identity=28.030303030303, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=30.0395256916996, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=29.0697674418605, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=24.901185770751, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI31542939, Length=202, Percent_Identity=27.7227722772277, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI210032110, Length=193, Percent_Identity=29.0155440414508, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI310128830, Length=210, Percent_Identity=29.0476190476191, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI310115468, Length=210, Percent_Identity=29.0476190476191, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI40807363, Length=193, Percent_Identity=30.5699481865285, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI142976729, Length=193, Percent_Identity=29.5336787564767, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI33667109, Length=199, Percent_Identity=25.6281407035176, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI25282469, Length=227, Percent_Identity=28.6343612334802, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=27.1317829457364, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=24.3093922651934, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI10190704, Length=256, Percent_Identity=24.609375, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI20149619, Length=199, Percent_Identity=26.6331658291457, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI146231950, Length=209, Percent_Identity=28.2296650717703, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI40548397, Length=259, Percent_Identity=26.6409266409266, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI214010158, Length=259, Percent_Identity=26.6409266409266, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI214010156, Length=259, Percent_Identity=26.6409266409266, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI22758144, Length=259, Percent_Identity=26.6409266409266, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4503301, Length=252, Percent_Identity=28.1746031746032, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI32455239, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI5031765, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=31.3725490196078, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=31.9838056680162, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=34.6774193548387, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=35.1778656126482, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=29.7619047619048, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=29.3650793650794, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=29.6, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=30.5220883534137, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=31.0483870967742, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=26.4227642276423, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI2367365, Length=256, Percent_Identity=32.03125, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787820, Length=250, Percent_Identity=26.8, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787526, Length=250, Percent_Identity=25.6, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789057, Length=251, Percent_Identity=26.2948207171315, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788891, Length=260, Percent_Identity=28.8461538461538, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786701, Length=207, Percent_Identity=27.536231884058, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=266, Percent_Identity=34.2105263157895, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=30.3149606299213, Blast_Score=124, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=28.4584980237154, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=32.4626865671642, Blast_Score=117, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=33.0827067669173, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=32.0754716981132, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=31.3432835820896, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=31.8548387096774, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=30.4832713754647, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17560220, Length=281, Percent_Identity=31.3167259786477, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17538480, Length=271, Percent_Identity=30.6273062730627, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=30.0380228136882, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193204405, Length=280, Percent_Identity=29.6428571428571, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=32.5396825396825, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17563726, Length=271, Percent_Identity=30.6273062730627, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=31.0756972111554, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=33.852140077821, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=28.968253968254, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17538182, Length=264, Percent_Identity=28.4090909090909, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=28.4552845528455, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=28.0898876404494, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=29.8449612403101, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=275, Percent_Identity=29.0909090909091, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17564282, Length=246, Percent_Identity=32.520325203252, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193203117, Length=201, Percent_Identity=35.8208955223881, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=29.5880149812734, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI193203115, Length=200, Percent_Identity=36, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=28.3582089552239, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=29.0566037735849, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=215, Percent_Identity=28.3720930232558, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=160, Percent_Identity=31.25, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=246, Percent_Identity=27.2357723577236, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=30.0395256916996, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=195, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6322861, Length=263, Percent_Identity=26.2357414448669, Blast_Score=83, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323882, Length=208, Percent_Identity=26.4423076923077, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6324126, Length=263, Percent_Identity=23.9543726235741, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=34.1085271317829, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=35.9375, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI21357041, Length=261, Percent_Identity=34.0996168582375, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI28571526, Length=263, Percent_Identity=33.8403041825095, Blast_Score=120, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=35.2941176470588, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=26.2745098039216, Blast_Score=114, Evalue=9e-26,
Organism=Drosophila melanogaster, GI18859837, Length=257, Percent_Identity=29.1828793774319, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24644337, Length=259, Percent_Identity=35.1351351351351, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281364892, Length=195, Percent_Identity=29.7435897435897, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24640492, Length=199, Percent_Identity=26.6331658291457, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24581726, Length=205, Percent_Identity=30.7317073170732, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24643142, Length=255, Percent_Identity=28.6274509803922, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI21358495, Length=197, Percent_Identity=28.4263959390863, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24647946, Length=210, Percent_Identity=30.4761904761905, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45553409, Length=209, Percent_Identity=30.622009569378, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647948, Length=209, Percent_Identity=30.622009569378, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357673, Length=194, Percent_Identity=24.2268041237113, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221510726, Length=193, Percent_Identity=27.4611398963731, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26994; Mature: 26863

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLEGKSVIITGAGSGIGRAASLMFTKEGARLIAVDRTEGVKETVELVKQQGGIAEAVM
CCCCCCCEEEEEECCCCCCHHEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHH
ADAGSEADISGFIDRAVATYGKLDVIWANAGISGGLKPIAEQTVEHWQEILRVNLIGPFL
HCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVKYAMPHMVRQQRGAIVCTASVAGLKSGASGHPYAASKAGVISLVQTTAYSLSGTGVRI
HHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCEEE
NAVCPGLIETGMTKPIFDGAKERGTEGKIGQLNPLKRAGQPHEIAAMALFLASDEASYVN
EEECCHHHHHCCCCCHHCCHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCC
GQAFPVDGGLTASMPYAGKPI
CEEEECCCCCEECCCCCCCCC
>Mature Secondary Structure 
GRLEGKSVIITGAGSGIGRAASLMFTKEGARLIAVDRTEGVKETVELVKQQGGIAEAVM
CCCCCCEEEEEECCCCCCHHEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHH
ADAGSEADISGFIDRAVATYGKLDVIWANAGISGGLKPIAEQTVEHWQEILRVNLIGPFL
HCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVKYAMPHMVRQQRGAIVCTASVAGLKSGASGHPYAASKAGVISLVQTTAYSLSGTGVRI
HHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCEEE
NAVCPGLIETGMTKPIFDGAKERGTEGKIGQLNPLKRAGQPHEIAAMALFLASDEASYVN
EEECCHHHHHCCCCCHHCCHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCC
GQAFPVDGGLTASMPYAGKPI
CEEEECCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]