| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339983
Identifier: 146339983
GI number: 146339983
Start: 3189774
End: 3190358
Strand: Reverse
Name: 146339983
Synonym: BRADO2988
Alternate gene names: NA
Gene position: 3190358-3189774 (Counterclockwise)
Preceding gene: 146339984
Following gene: 146339978
Centisome position: 42.79
GC content: 65.3
Gene sequence:
>585_bases ATGGCGAAAGACAAGGCTCCTGCGATCCAGATCAAGAGCTACGCCTCGCACCACGTGATCACCCAGCCCAATCCGCTGAA GAAGGTGCTGCGCCGCGCCGACGAGAAGGATCTCGACGATCCGGTCGCGCGCGCCGAGGCGGCGCTGGCGGGGTTGTCGG GCGAGTTCAAGTCGTGGATGGACACCGAGGCCGAGCGGCTGTCGAAGGGCTATGCCAACGTGCTCAAGACCCGCTTTGAC GACGACGCCTGCGAGGAGATGTTCCGAGCCGCTCATGACATCAAGGGTGACGCCGCGACGTTCGGCTATCCGGCGGCGGC CGAGGTCGCCGACAGCCTGTGCCGGATCATCGAGCACGCGCCGGACCTGGACAAGGTCCCGACCGAGCTGTTCGAGCACC ACGTCAATGCCATCCAGGCGATCGTGCACGACCACACCAAGTATCACAGCCCGACCGTCGCCGCCGAGCTGAGCCGTCGC CTGCGCCGCGTCGCGGACGACTATCTGATCCAGGTGAACCGCAATCGCCCCGAGCATCTCGAAGCGATCCTTGCCCCGAG CCTTGTTCCCAGCGATCAACCGTAG
Upstream 100 bases:
>100_bases TGTTAACGCCGTCCGGGAATCGCTGCACAGCCCAGCCGGTTCGTCGGCTATCAATCGTCGGTCAGATCGCGTTGGTCGGC ATCACCTTGAGGACATCGAG
Downstream 100 bases:
>100_bases TCATGATGCTGTAGGGTGGGCAAAGCAGCCGCCGCGAAAGCGGCGGTCGCGTGCCCACCGTCCATCAACACGCTCGCGCC ACGACGGTGGGCACGGCGCA
Product: two-component sensor protein
Products: NA
Alternate protein names: Hpt Domain-Containing Protein; CheA-Like Signal Transduction Histidine Kinase; Two-Component Sensor Protein; CheA Signal Transduction Histidine Kinase; Histidine Phosphotransferase Domain-Containing Protein; Histidine Phosphotransferase Domain Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAKDKAPAIQIKSYASHHVITQPNPLKKVLRRADEKDLDDPVARAEAALAGLSGEFKSWMDTEAERLSKGYANVLKTRFD DDACEEMFRAAHDIKGDAATFGYPAAAEVADSLCRIIEHAPDLDKVPTELFEHHVNAIQAIVHDHTKYHSPTVAAELSRR LRRVADDYLIQVNRNRPEHLEAILAPSLVPSDQP
Sequences:
>Translated_194_residues MAKDKAPAIQIKSYASHHVITQPNPLKKVLRRADEKDLDDPVARAEAALAGLSGEFKSWMDTEAERLSKGYANVLKTRFD DDACEEMFRAAHDIKGDAATFGYPAAAEVADSLCRIIEHAPDLDKVPTELFEHHVNAIQAIVHDHTKYHSPTVAAELSRR LRRVADDYLIQVNRNRPEHLEAILAPSLVPSDQP >Mature_193_residues AKDKAPAIQIKSYASHHVITQPNPLKKVLRRADEKDLDDPVARAEAALAGLSGEFKSWMDTEAERLSKGYANVLKTRFDD DACEEMFRAAHDIKGDAATFGYPAAAEVADSLCRIIEHAPDLDKVPTELFEHHVNAIQAIVHDHTKYHSPTVAAELSRRL RRVADDYLIQVNRNRPEHLEAILAPSLVPSDQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21609; Mature: 21477
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDKAPAIQIKSYASHHVITQPNPLKKVLRRADEKDLDDPVARAEAALAGLSGEFKSWM CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH DTEAERLSKGYANVLKTRFDDDACEEMFRAAHDIKGDAATFGYPAAAEVADSLCRIIEHA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC PDLDKVPTELFEHHVNAIQAIVHDHTKYHSPTVAAELSRRLRRVADDYLIQVNRNRPEHL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EAILAPSLVPSDQP HHHHHCCCCCCCCC >Mature Secondary Structure AKDKAPAIQIKSYASHHVITQPNPLKKVLRRADEKDLDDPVARAEAALAGLSGEFKSWM CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH DTEAERLSKGYANVLKTRFDDDACEEMFRAAHDIKGDAATFGYPAAAEVADSLCRIIEHA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC PDLDKVPTELFEHHVNAIQAIVHDHTKYHSPTVAAELSRRLRRVADDYLIQVNRNRPEHL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EAILAPSLVPSDQP HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA