| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146339953
Identifier: 146339953
GI number: 146339953
Start: 3155732
End: 3156328
Strand: Reverse
Name: 146339953
Synonym: BRADO2957
Alternate gene names: NA
Gene position: 3156328-3155732 (Counterclockwise)
Preceding gene: 146339954
Following gene: 146339951
Centisome position: 42.33
GC content: 64.49
Gene sequence:
>597_bases TTGGCGGTTGCAGCCATCCTGATGGCGATGGGGACGATGGCGCATGCCGGTGATGACCGCGTGCTCTATGCGAGCCTCGG CGACACCACGCGGGCCCCGATCGGCTGGATCGAGTTCTGCACCGAGACTCCCGAGGAATGCCGCGGCGGTGCGTCGCAGC CCCGCGACATCGTGCTGTCCCAGACCGCCTGGCGTGATCTGCTAAAGGTCAATCGCTGGGTCAACGAGAACGTCAAGCCC ATCACCGACATGGACCATTGGGGCGTGGTCGAGAAATGGTCGCTGCCGACCGACGGCTATGGCGACTGCGAGGATTACGT GCTGCTGAAGCGCAAGCTGCTGATCGATGCCGGCTGGCCCCGCGAGGCGCTGCTCATCACTGTGGTGCGCGACAAGAAGG GTGAAGGACATGCGGTCCTCACCGTGAAGACCGACAAGGGCGAGTACATTCTCGACAATCAGAACGAGAACGTCGTTGCC TGGACCGAGACCGGCTACCGCTTCGTCAAGCGGCAGTCGCAGAGCGACCCCAACGTCTGGGTCTCGCTCGGCGACGGTCG CCCGGCAGTGGCCACCGCCAGCGCCAGAGAACGCTGA
Upstream 100 bases:
>100_bases CCATCGTGGCGGTTTAGCGGCAGCGAAAAATCTTTGTGAGACACATGGTCCCAACAAAACGGGGGCCAAAATGGTCAAGC GGACGGGACAGGCGAAGGGA
Downstream 100 bases:
>100_bases AGCGTTCGCGAGCGCAGAGACGAGGCACGACAACAGGAATCGAGTTACGCGACCCGGTCACATCCCCACCCCTCCCCGTC CCAGACCGGTTCGCGCGCGG
Product: putative signal peptide
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAVAAILMAMGTMAHAGDDRVLYASLGDTTRAPIGWIEFCTETPEECRGGASQPRDIVLSQTAWRDLLKVNRWVNENVKP ITDMDHWGVVEKWSLPTDGYGDCEDYVLLKRKLLIDAGWPREALLITVVRDKKGEGHAVLTVKTDKGEYILDNQNENVVA WTETGYRFVKRQSQSDPNVWVSLGDGRPAVATASARER
Sequences:
>Translated_198_residues MAVAAILMAMGTMAHAGDDRVLYASLGDTTRAPIGWIEFCTETPEECRGGASQPRDIVLSQTAWRDLLKVNRWVNENVKP ITDMDHWGVVEKWSLPTDGYGDCEDYVLLKRKLLIDAGWPREALLITVVRDKKGEGHAVLTVKTDKGEYILDNQNENVVA WTETGYRFVKRQSQSDPNVWVSLGDGRPAVATASARER >Mature_197_residues AVAAILMAMGTMAHAGDDRVLYASLGDTTRAPIGWIEFCTETPEECRGGASQPRDIVLSQTAWRDLLKVNRWVNENVKPI TDMDHWGVVEKWSLPTDGYGDCEDYVLLKRKLLIDAGWPREALLITVVRDKKGEGHAVLTVKTDKGEYILDNQNENVVAW TETGYRFVKRQSQSDPNVWVSLGDGRPAVATASARER
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22103; Mature: 21972
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAAILMAMGTMAHAGDDRVLYASLGDTTRAPIGWIEFCTETPEECRGGASQPRDIVLS CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHCCCCCCCCEEEEC QTAWRDLLKVNRWVNENVKPITDMDHWGVVEKWSLPTDGYGDCEDYVLLKRKLLIDAGWP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHEEECCCC REALLITVVRDKKGEGHAVLTVKTDKGEYILDNQNENVVAWTETGYRFVKRQSQSDPNVW CCEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCHHHHHHCCCCCCCEE VSLGDGRPAVATASARER EEECCCCCEEECCCCCCC >Mature Secondary Structure AVAAILMAMGTMAHAGDDRVLYASLGDTTRAPIGWIEFCTETPEECRGGASQPRDIVLS HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHCCCCCCCCEEEEC QTAWRDLLKVNRWVNENVKPITDMDHWGVVEKWSLPTDGYGDCEDYVLLKRKLLIDAGWP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHEEECCCC REALLITVVRDKKGEGHAVLTVKTDKGEYILDNQNENVVAWTETGYRFVKRQSQSDPNVW CCEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCHHHHHHCCCCCCCEE VSLGDGRPAVATASARER EEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA