| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339938
Identifier: 146339938
GI number: 146339938
Start: 3147615
End: 3148313
Strand: Reverse
Name: 146339938
Synonym: BRADO2942
Alternate gene names: NA
Gene position: 3148313-3147615 (Counterclockwise)
Preceding gene: 146339941
Following gene: 146339935
Centisome position: 42.22
GC content: 68.1
Gene sequence:
>699_bases ATGACGATGTTTTCGGTCCGCAGCGTCCGCCCTTCGAACGGACACGGCCACGCCGTGCCGATCGTGATCGGCTGCGCGCT GGCGGCATTGGCGGTGGCGTTGGTCGCCTATCTGTTGTGGCCGACCTGGCGGGCCGGCGCCTACAAGGGCCCCGATCGCC TGCCGGTCAGCATCGGCGGCACCATCTTCAACGTGCCCTCGGCGGCCATCCGGGTGAAGATCCAGCGCCACACCGGCCCG CAGGAACGCGTCGATCTCAGCTTCGACTATCCTTCGCTGACCCCGCCCGAGGCGCCGCATCACGTCTCCGCCGACCAGAT CGACCAGGCGCCGCATCCGATCGATCGCATCTTCGTGTCGATCTCGGCGCATCATGATGCGCTGTCGCCGGAGGCGCGGC TGGCGACGATCTATCCGCGCTATCTGAACCCGGCGGCGGTCTCGGTGCAGGACGGCCTGACGATGCGCGGCTTCCGCGCC GGCACGCCCTACGATGTCGAGGATCTGTTCGTGGCCGAGCAGCCGGCCCTGGTCGCACGCTGCACGCGCGATGCAGCCAC GCCCGGCATGTGCCTCAGCGAACGCCGCATCGAAGGCGCCGATCTCGTCTTTCGTTATCCACGCAGCTGGCTGTCGCAAT GGCAGGACGTCGCCGCCGCCATGGAGCGGCTGACGGCGCAGATGCATGCGGTGAAGTAG
Upstream 100 bases:
>100_bases GCCGCGCGGGCCGCCGATCCCCATGGGGTAAGATCCTGCAGAAAGCCGCATCGCCGTGGCATAGTCGGACGTGATTCGCC CCGGAGATCCCCTGCCCGCC
Downstream 100 bases:
>100_bases TTCGTCGTAGCCCGGATGAGCGCAGCGATATCCGGGGTCTCCGACACAGCACGTGTGAACCCGCATGTCGCTGACGCTCA TGCGGGCTACGCGATCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTMFSVRSVRPSNGHGHAVPIVIGCALAALAVALVAYLLWPTWRAGAYKGPDRLPVSIGGTIFNVPSAAIRVKIQRHTGP QERVDLSFDYPSLTPPEAPHHVSADQIDQAPHPIDRIFVSISAHHDALSPEARLATIYPRYLNPAAVSVQDGLTMRGFRA GTPYDVEDLFVAEQPALVARCTRDAATPGMCLSERRIEGADLVFRYPRSWLSQWQDVAAAMERLTAQMHAVK
Sequences:
>Translated_232_residues MTMFSVRSVRPSNGHGHAVPIVIGCALAALAVALVAYLLWPTWRAGAYKGPDRLPVSIGGTIFNVPSAAIRVKIQRHTGP QERVDLSFDYPSLTPPEAPHHVSADQIDQAPHPIDRIFVSISAHHDALSPEARLATIYPRYLNPAAVSVQDGLTMRGFRA GTPYDVEDLFVAEQPALVARCTRDAATPGMCLSERRIEGADLVFRYPRSWLSQWQDVAAAMERLTAQMHAVK >Mature_231_residues TMFSVRSVRPSNGHGHAVPIVIGCALAALAVALVAYLLWPTWRAGAYKGPDRLPVSIGGTIFNVPSAAIRVKIQRHTGPQ ERVDLSFDYPSLTPPEAPHHVSADQIDQAPHPIDRIFVSISAHHDALSPEARLATIYPRYLNPAAVSVQDGLTMRGFRAG TPYDVEDLFVAEQPALVARCTRDAATPGMCLSERRIEGADLVFRYPRSWLSQWQDVAAAMERLTAQMHAVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25397; Mature: 25266
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMFSVRSVRPSNGHGHAVPIVIGCALAALAVALVAYLLWPTWRAGAYKGPDRLPVSIGG CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC TIFNVPSAAIRVKIQRHTGPQERVDLSFDYPSLTPPEAPHHVSADQIDQAPHPIDRIFVS EEEECCCEEEEEEEECCCCCCHHEEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHHEEEE ISAHHDALSPEARLATIYPRYLNPAAVSVQDGLTMRGFRAGTPYDVEDLFVAEQPALVAR EECCCCCCCCCCEEEEECHHHCCCCEEECCCCCEECCCCCCCCCCHHHHEECCCCHHHHH CTRDAATPGMCLSERRIEGADLVFRYPRSWLSQWQDVAAAMERLTAQMHAVK HHHCCCCCCCCHHHCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TMFSVRSVRPSNGHGHAVPIVIGCALAALAVALVAYLLWPTWRAGAYKGPDRLPVSIGG CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC TIFNVPSAAIRVKIQRHTGPQERVDLSFDYPSLTPPEAPHHVSADQIDQAPHPIDRIFVS EEEECCCEEEEEEEECCCCCCHHEEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHHEEEE ISAHHDALSPEARLATIYPRYLNPAAVSVQDGLTMRGFRAGTPYDVEDLFVAEQPALVAR EECCCCCCCCCCEEEEECHHHCCCCEEECCCCCEECCCCCCCCCCHHHHEECCCCHHHHH CTRDAATPGMCLSERRIEGADLVFRYPRSWLSQWQDVAAAMERLTAQMHAVK HHHCCCCCCCCHHHCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA