| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339876
Identifier: 146339876
GI number: 146339876
Start: 3078161
End: 3079678
Strand: Direct
Name: 146339876
Synonym: BRADO2878
Alternate gene names: NA
Gene position: 3078161-3079678 (Clockwise)
Preceding gene: 146339875
Following gene: 146339878
Centisome position: 41.28
GC content: 67.46
Gene sequence:
>1518_bases ATGACCTCTGCGGCAGAGGCCAGCGATTCCAGGCTGGTCCGTAATGCCTGGCTGACCATTGCTGGCCTCGTCCTGCTTCG ACTGGTCGCGGCTGCGGTCACGCCGATCACCTTCGACGAAGCCTATTACTGGATGTGGTCGAAGCACCTCGCCGGCGGCT ACTACGACCATCCGCCGATGGTTGCCGTCGTGATCCGCCTGGGGACGCTGATCGCCGGTGACAGCGAGCTCGGCGTGCGC CTGGTCTCGATCCTGCTCGGGCTGCCGATGAGCTATGCGGTGTATCGCACCGCGCAGATCCTGTTCGGCAGCGTGCGCGT CGCGGTGACCGCGGCGCTGCTGCTCAACGTGACGCTGATGGCGGCCGTCGGCACGCTGATCGTGACGCCCGATGCGCCGC TCTTGGTCGCTTCGAGCTTCGTGCTGTTCTTCTGCGCCAAGGTGCTGGAGACGGGCAGGGGCGTGTGGTGGCTGGCGGTC GGTGCCGCGGTCGGTGCCGCGCTGCTGTCGAAATACACGTCGCTGTTCTTCGGCGCCGCGATCCTGATCTGGCTCCTTGC CGTGCCGAAGCTGCGGCCCTGGCTGGCCTCGCCTTGGCCCTATCTCGGTGGCCTCGTCGCGTTTGCGATCTTCTCGCCGG TCATCCTGTGGAATGCCGAGCACCAGTGGGTCTCGTTCATCAAGCAGCTCGGCCGCGCCAGGATCGAGGAGGTCAAGCCC GTCTACATCGCCGAGATCATCCCGACGCAGTTCGCCTTCGCCACACCGCTGATCTTCATCCTCGGGGTAATGGGTCTCTA TGCGCTGGCGCGGCGCCGGGCCGGGGATGCGGCAGGACGCGTGCTGGTCGAGGCGATGGTCTGGGTCGTCACCGCCTATT TCGTCTGGCACTCGCTGCATGCCCGCGTCGAGGCGAACTGGTTCGCGCCGATCTATCCGGCCTTCGTCGTTGCCGCCGCG GCCGCCGCGCACCCCGTCGCCTGGAGGCCGCGCGAGCAGCGAATGGTGGCCTTCTGCCTGCGCTGGGCGGTGCCCGCCGG CGTCGTGATGTTCGTTGCACTGATCCTGCAGGCCAATACGGGGCTGCTGTCGGGCTACAAGCGGGACGCCACCGTGCGCA GCGTGGGCGTCGGCTGGAAGCCGCTCGCTGCCGAGATCGAGGCGGCGCGCGTCCGTTCCGGGGCCAATTGCGTGCTCGCG ATGGATTATGGGACCACCGCCTGGCTGTCGTTCTATCTGCCGCGCGGAACCTGCGTGTTGCAGCCGATCCAGCGCATCCG CTGGGTCAATTTCCCGGAGCCTGATCCGGCGAAGCTCGCGGGCACGCAGCTGCTCGTGGACGAGGCCCAGATCGCGACGC GGTTCTACGTCGAGAGCACGTTCGCCCGCGTCGAGAAGGTCGGCGAGGCCGATCGCAAGCGCGGGCCGCTGACGATCGAG ACTTACGCGTTCTATGCGCTCAGTCAGCCGAGAGGCGAGATCCTCGATCGCACCCCGCCGCCCGAGCTGCAGCGCTGA
Upstream 100 bases:
>100_bases ACGACCAGGAGCCGATCTGGTGGCTGGCCGGCGCGGCCGGCGCGCTGATGGGCGTGGTCTGGAATTACGCGATCTCCGGA TTGTTCGTCTGGCGCAAGCG
Downstream 100 bases:
>100_bases CGCGCGCGTCAGGCCTGCTGCGGAATGATGTCCCCCAGCGACTTGTCCCGCGCGTGAATCGCGACCATGTTGATGCCGGC ATCGACGGTCCTGTAGCCGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Family; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Glycosyl Transferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family; Dolichol Monophosphate Mannose Synthase; Glycosyltransferase; Family; Glycosyl/Arabinosyl/Mannosyl Transferase; Dolichyl-Phosphate Mannosyltransferase; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTSAAEASDSRLVRNAWLTIAGLVLLRLVAAAVTPITFDEAYYWMWSKHLAGGYYDHPPMVAVVIRLGTLIAGDSELGVR LVSILLGLPMSYAVYRTAQILFGSVRVAVTAALLLNVTLMAAVGTLIVTPDAPLLVASSFVLFFCAKVLETGRGVWWLAV GAAVGAALLSKYTSLFFGAAILIWLLAVPKLRPWLASPWPYLGGLVAFAIFSPVILWNAEHQWVSFIKQLGRARIEEVKP VYIAEIIPTQFAFATPLIFILGVMGLYALARRRAGDAAGRVLVEAMVWVVTAYFVWHSLHARVEANWFAPIYPAFVVAAA AAAHPVAWRPREQRMVAFCLRWAVPAGVVMFVALILQANTGLLSGYKRDATVRSVGVGWKPLAAEIEAARVRSGANCVLA MDYGTTAWLSFYLPRGTCVLQPIQRIRWVNFPEPDPAKLAGTQLLVDEAQIATRFYVESTFARVEKVGEADRKRGPLTIE TYAFYALSQPRGEILDRTPPPELQR
Sequences:
>Translated_505_residues MTSAAEASDSRLVRNAWLTIAGLVLLRLVAAAVTPITFDEAYYWMWSKHLAGGYYDHPPMVAVVIRLGTLIAGDSELGVR LVSILLGLPMSYAVYRTAQILFGSVRVAVTAALLLNVTLMAAVGTLIVTPDAPLLVASSFVLFFCAKVLETGRGVWWLAV GAAVGAALLSKYTSLFFGAAILIWLLAVPKLRPWLASPWPYLGGLVAFAIFSPVILWNAEHQWVSFIKQLGRARIEEVKP VYIAEIIPTQFAFATPLIFILGVMGLYALARRRAGDAAGRVLVEAMVWVVTAYFVWHSLHARVEANWFAPIYPAFVVAAA AAAHPVAWRPREQRMVAFCLRWAVPAGVVMFVALILQANTGLLSGYKRDATVRSVGVGWKPLAAEIEAARVRSGANCVLA MDYGTTAWLSFYLPRGTCVLQPIQRIRWVNFPEPDPAKLAGTQLLVDEAQIATRFYVESTFARVEKVGEADRKRGPLTIE TYAFYALSQPRGEILDRTPPPELQR >Mature_504_residues TSAAEASDSRLVRNAWLTIAGLVLLRLVAAAVTPITFDEAYYWMWSKHLAGGYYDHPPMVAVVIRLGTLIAGDSELGVRL VSILLGLPMSYAVYRTAQILFGSVRVAVTAALLLNVTLMAAVGTLIVTPDAPLLVASSFVLFFCAKVLETGRGVWWLAVG AAVGAALLSKYTSLFFGAAILIWLLAVPKLRPWLASPWPYLGGLVAFAIFSPVILWNAEHQWVSFIKQLGRARIEEVKPV YIAEIIPTQFAFATPLIFILGVMGLYALARRRAGDAAGRVLVEAMVWVVTAYFVWHSLHARVEANWFAPIYPAFVVAAAA AAHPVAWRPREQRMVAFCLRWAVPAGVVMFVALILQANTGLLSGYKRDATVRSVGVGWKPLAAEIEAARVRSGANCVLAM DYGTTAWLSFYLPRGTCVLQPIQRIRWVNFPEPDPAKLAGTQLLVDEAQIATRFYVESTFARVEKVGEADRKRGPLTIET YAFYALSQPRGEILDRTPPPELQR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55387; Mature: 55256
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAAEASDSRLVRNAWLTIAGLVLLRLVAAAVTPITFDEAYYWMWSKHLAGGYYDHPPM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCCCCCHH VAVVIRLGTLIAGDSELGVRLVSILLGLPMSYAVYRTAQILFGSVRVAVTAALLLNVTLM HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVGTLIVTPDAPLLVASSFVLFFCAKVLETGRGVWWLAVGAAVGAALLSKYTSLFFGAA HHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH ILIWLLAVPKLRPWLASPWPYLGGLVAFAIFSPVILWNAEHQWVSFIKQLGRARIEEVKP HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCC VYIAEIIPTQFAFATPLIFILGVMGLYALARRRAGDAAGRVLVEAMVWVVTAYFVWHSLH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ARVEANWFAPIYPAFVVAAAAAAHPVAWRPREQRMVAFCLRWAVPAGVVMFVALILQANT HHEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLLSGYKRDATVRSVGVGWKPLAAEIEAARVRSGANCVLAMDYGTTAWLSFYLPRGTCVL CHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCHHH QPIQRIRWVNFPEPDPAKLAGTQLLVDEAQIATRFYVESTFARVEKVGEADRKRGPLTIE HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE TYAFYALSQPRGEILDRTPPPELQR EEEEEEECCCCHHHCCCCCCCCCCC >Mature Secondary Structure TSAAEASDSRLVRNAWLTIAGLVLLRLVAAAVTPITFDEAYYWMWSKHLAGGYYDHPPM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCCCCCHH VAVVIRLGTLIAGDSELGVRLVSILLGLPMSYAVYRTAQILFGSVRVAVTAALLLNVTLM HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVGTLIVTPDAPLLVASSFVLFFCAKVLETGRGVWWLAVGAAVGAALLSKYTSLFFGAA HHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH ILIWLLAVPKLRPWLASPWPYLGGLVAFAIFSPVILWNAEHQWVSFIKQLGRARIEEVKP HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCC VYIAEIIPTQFAFATPLIFILGVMGLYALARRRAGDAAGRVLVEAMVWVVTAYFVWHSLH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ARVEANWFAPIYPAFVVAAAAAAHPVAWRPREQRMVAFCLRWAVPAGVVMFVALILQANT HHEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLLSGYKRDATVRSVGVGWKPLAAEIEAARVRSGANCVLAMDYGTTAWLSFYLPRGTCVL CHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCHHH QPIQRIRWVNFPEPDPAKLAGTQLLVDEAQIATRFYVESTFARVEKVGEADRKRGPLTIE HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE TYAFYALSQPRGEILDRTPPPELQR EEEEEEECCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA