| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is acrR [C]
Identifier: 146339866
GI number: 146339866
Start: 3068420
End: 3069034
Strand: Direct
Name: acrR [C]
Synonym: BRADO2868
Alternate gene names: 146339866
Gene position: 3068420-3069034 (Clockwise)
Preceding gene: 146339865
Following gene: 146339867
Centisome position: 41.15
GC content: 66.83
Gene sequence:
>615_bases ATGGGAGCGGTCTCCCGCCGCGCCGACCGAGCCGCCGAGCGCCGTGCCGCCATCGTGCAGGCGGCGATGGACGAGTTCAT CGCGCGCGGCTTTGCCGCGACCCGGCTCGATGACATCGCCAAGCGCGCAGGCGTCGCCAAGGGCACGATCTATCTGCACT TCAAGGACAAGGAATCGATGTTCGAGGAATTGATCCGGACTGCGATCGTGCCCTTCGTCGGCCGGCTCGCTGCGCCGCCG CCGGTGGGCGGCTCGGTGCGCGATATGGTCGAGGGCCTGGCGCGCATGTTCCTGCAGGAGATCGCGGGCACGCGGCGGGC CGATCTCGTTCGCCTCATCATCGCCGAAGGGCCGCGCTTTCCGGAGATTGCCGATTTCTATTATCGCGAGGTCGTCTCCC GCGGTCTCGCGGCCATGCGGGCGCTGATCCAGCTGGCCGTCACGCGCGGCGAGATCCGCGAGCCCAAGCTCGTGCAGCAT CCGCAACTGATGATCGCGCCGATGATGGTCGCGGTGATCTGGAAGAGTCTGTTCGAAACGCATGCGCCGCTCGATGCGGA GGCGATGCTGCAGACGCATCTCGATCTGATCTTCGGGCCGAGGAGGCCGACATGA
Upstream 100 bases:
>100_bases CAATGACTGACTGGTCAGTCATAATCCTAGGATGTCGAAGTCTTTCAAGACCGCCCGCCGGGGCGGAGATGCTGCGAGCG CTGTCGCGGATGACCCGGGA
Downstream 100 bases:
>100_bases GCCTGCTGCACTGCCTTGCCGTGCTGGTCACGGCGTTCAGTCTCAACGGTTGCAAGGACACGCGCGATCCCGGCTATCAG GGCTGGGTCGAGGCCGACAT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR Family Regulatory Protein; Transcription Regulator TetR Family; Transcriptional Regulator Protein Tetr/Acrr-Family; Transcriptional Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator Protein; TetR Family Transcription Regulator Protein; Bacterial Regulatory Protein TetR Family Protein; Transcriptional Regulator Protein; TRANSCRIPTIONal REGULATOR PROTEIN TetR/AcrR-Family
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGAVSRRADRAAERRAAIVQAAMDEFIARGFAATRLDDIAKRAGVAKGTIYLHFKDKESMFEELIRTAIVPFVGRLAAPP PVGGSVRDMVEGLARMFLQEIAGTRRADLVRLIIAEGPRFPEIADFYYREVVSRGLAAMRALIQLAVTRGEIREPKLVQH PQLMIAPMMVAVIWKSLFETHAPLDAEAMLQTHLDLIFGPRRPT
Sequences:
>Translated_204_residues MGAVSRRADRAAERRAAIVQAAMDEFIARGFAATRLDDIAKRAGVAKGTIYLHFKDKESMFEELIRTAIVPFVGRLAAPP PVGGSVRDMVEGLARMFLQEIAGTRRADLVRLIIAEGPRFPEIADFYYREVVSRGLAAMRALIQLAVTRGEIREPKLVQH PQLMIAPMMVAVIWKSLFETHAPLDAEAMLQTHLDLIFGPRRPT >Mature_203_residues GAVSRRADRAAERRAAIVQAAMDEFIARGFAATRLDDIAKRAGVAKGTIYLHFKDKESMFEELIRTAIVPFVGRLAAPPP VGGSVRDMVEGLARMFLQEIAGTRRADLVRLIIAEGPRFPEIADFYYREVVSRGLAAMRALIQLAVTRGEIREPKLVQHP QLMIAPMMVAVIWKSLFETHAPLDAEAMLQTHLDLIFGPRRPT
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22691; Mature: 22560
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVSRRADRAAERRAAIVQAAMDEFIARGFAATRLDDIAKRAGVAKGTIYLHFKDKESM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH FEELIRTAIVPFVGRLAAPPPVGGSVRDMVEGLARMFLQEIAGTRRADLVRLIIAEGPRF HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC PEIADFYYREVVSRGLAAMRALIQLAVTRGEIREPKLVQHPQLMIAPMMVAVIWKSLFET CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH HAPLDAEAMLQTHLDLIFGPRRPT CCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GAVSRRADRAAERRAAIVQAAMDEFIARGFAATRLDDIAKRAGVAKGTIYLHFKDKESM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH FEELIRTAIVPFVGRLAAPPPVGGSVRDMVEGLARMFLQEIAGTRRADLVRLIIAEGPRF HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC PEIADFYYREVVSRGLAAMRALIQLAVTRGEIREPKLVQHPQLMIAPMMVAVIWKSLFET CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH HAPLDAEAMLQTHLDLIFGPRRPT CCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA