| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is bmrU [H]
Identifier: 146339823
GI number: 146339823
Start: 3027197
End: 3028150
Strand: Direct
Name: bmrU [H]
Synonym: BRADO2824
Alternate gene names: 146339823
Gene position: 3027197-3028150 (Clockwise)
Preceding gene: 146339815
Following gene: 146339824
Centisome position: 40.6
GC content: 68.13
Gene sequence:
>954_bases GTGACGGCGGGGGGTGACCATACGATGGTTGCGAAAGCACGGCTTTCGCGGCCGAGCGCCACGGTTCGCCGGCTTCTGGT GATCATCAATCGCGGCAGCCGTTCGGGCGGCGAGGCCGCGGGCGTTGCCGTCTCGCGGCTGAGCGCTGCGGGCTACGACC TCGTGATCTCGGCGCCGCACAGTCCGCGCGAGGTCGCGCCATGGATCGAAGCGCACGCTGATGATGCGGAAGCGGTGGTC GTTGCCGGAGGTGATGGCAGCCTCAATGCAGCTGCGCCGGCGCTGGTGAAGACCGGCTTGCCGCTCGGCATCATCCCGGC CGGCACCGCCAACGATCTCGCGCGCACCCTTGGGCTCCCCGATACGATGGAGGCTGCGGCCGACGTGATCGCGGCCGGCC ATCGACGGCAGATCGATCTTGGCGAGGTCAATGGGCATCCGTTCTTCAACGTCGCCAGCCTCGGCCTCAGCGCCGAACTG GCGCGGCAGCTGACGAAGGAAACCAAGCGCCGCTTTGGGCGGTTGGGCTACGCGATCACCGCGCTGAAGGTGCTCACCAA TGCGCGGCCGTTTCGCGCGATGATCGTGTCGTCCGACGGCGCTGTGCGCGTGAAGACGCTGCAGATCGCGGTCGGTAACG GCCGCTATTACGGTGGCGGCATGGCGGTCCGGCACAATGCTGAGATCGACGACGCCCATCTCGACCTCTATTCGCTGGAG ATCGGCCGGGTCTGGAAGCTGCTGGCGATGGCCTACGACTTCCGCAAGGGCCGGCACGGGCTGTGGCAGGAGGTGCGGGC CTCGCGCGACACCTCGTTCGAGATCCGCACCCGCCGGCCGCGGCCGATCAATGCCGATGGCGAGCTCGTCACCTTCACAC CCGCGCGCTTTTCCGTGCTGCCGCGCGCCGTCACCGTGTTCGTGCCCAACACTGACAGGCAGGCGGGCACCTGA
Upstream 100 bases:
>100_bases GCCCTGGTCCCGAACGCGATGGAACCCAGAGCCGCGCCCGTCATTCTGTATGGAACCAGCGCACGAGCGCGTGCTGGCAT CTGGTGGACAGGAGCATGGC
Downstream 100 bases:
>100_bases CGCGGCTTGATCCGCACATTGCAGCCGCTCGTTTTCCACCGATCACATGTCGAGAAACCCATGACCAAGCAGACCCGCTT CAATCTCTGGTACGCTGTTG
Product: putative lipid kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTAGGDHTMVAKARLSRPSATVRRLLVIINRGSRSGGEAAGVAVSRLSAAGYDLVISAPHSPREVAPWIEAHADDAEAVV VAGGDGSLNAAAPALVKTGLPLGIIPAGTANDLARTLGLPDTMEAAADVIAAGHRRQIDLGEVNGHPFFNVASLGLSAEL ARQLTKETKRRFGRLGYAITALKVLTNARPFRAMIVSSDGAVRVKTLQIAVGNGRYYGGGMAVRHNAEIDDAHLDLYSLE IGRVWKLLAMAYDFRKGRHGLWQEVRASRDTSFEIRTRRPRPINADGELVTFTPARFSVLPRAVTVFVPNTDRQAGT
Sequences:
>Translated_317_residues MTAGGDHTMVAKARLSRPSATVRRLLVIINRGSRSGGEAAGVAVSRLSAAGYDLVISAPHSPREVAPWIEAHADDAEAVV VAGGDGSLNAAAPALVKTGLPLGIIPAGTANDLARTLGLPDTMEAAADVIAAGHRRQIDLGEVNGHPFFNVASLGLSAEL ARQLTKETKRRFGRLGYAITALKVLTNARPFRAMIVSSDGAVRVKTLQIAVGNGRYYGGGMAVRHNAEIDDAHLDLYSLE IGRVWKLLAMAYDFRKGRHGLWQEVRASRDTSFEIRTRRPRPINADGELVTFTPARFSVLPRAVTVFVPNTDRQAGT >Mature_316_residues TAGGDHTMVAKARLSRPSATVRRLLVIINRGSRSGGEAAGVAVSRLSAAGYDLVISAPHSPREVAPWIEAHADDAEAVVV AGGDGSLNAAAPALVKTGLPLGIIPAGTANDLARTLGLPDTMEAAADVIAAGHRRQIDLGEVNGHPFFNVASLGLSAELA RQLTKETKRRFGRLGYAITALKVLTNARPFRAMIVSSDGAVRVKTLQIAVGNGRYYGGGMAVRHNAEIDDAHLDLYSLEI GRVWKLLAMAYDFRKGRHGLWQEVRASRDTSFEIRTRRPRPINADGELVTFTPARFSVLPRAVTVFVPNTDRQAGT
Specific function: May catalyze the ATP-dependent phosphorylation of lipids other than diacylglycerol (DAG). In fact, is not able to exhibit diacylglycerol kinase activity in vitro [H]
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=242, Percent_Identity=28.099173553719, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: NA
Molecular weight: Translated: 33828; Mature: 33697
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGGDHTMVAKARLSRPSATVRRLLVIINRGSRSGGEAAGVAVSRLSAAGYDLVISAPH CCCCCCCEEEEHHHCCCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCC SPREVAPWIEAHADDAEAVVVAGGDGSLNAAAPALVKTGLPLGIIPAGTANDLARTLGLP CCHHHCHHHHCCCCCCCEEEEECCCCCCCHHCHHHHHCCCCEEEECCCCHHHHHHHCCCC DTMEAAADVIAAGHRRQIDLGEVNGHPFFNVASLGLSAELARQLTKETKRRFGRLGYAIT HHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALKVLTNARPFRAMIVSSDGAVRVKTLQIAVGNGRYYGGGMAVRHNAEIDDAHLDLYSLE HHHHHHCCCCEEEEEEECCCCEEEEEEEEEECCCEEECCCEEEEECCCCCCCEEEEEEEH IGRVWKLLAMAYDFRKGRHGLWQEVRASRDTSFEIRTRRPRPINADGELVTFTPARFSVL HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCHHHHCC PRAVTVFVPNTDRQAGT CEEEEEEECCCCCCCCC >Mature Secondary Structure TAGGDHTMVAKARLSRPSATVRRLLVIINRGSRSGGEAAGVAVSRLSAAGYDLVISAPH CCCCCCEEEEHHHCCCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCC SPREVAPWIEAHADDAEAVVVAGGDGSLNAAAPALVKTGLPLGIIPAGTANDLARTLGLP CCHHHCHHHHCCCCCCCEEEEECCCCCCCHHCHHHHHCCCCEEEECCCCHHHHHHHCCCC DTMEAAADVIAAGHRRQIDLGEVNGHPFFNVASLGLSAELARQLTKETKRRFGRLGYAIT HHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALKVLTNARPFRAMIVSSDGAVRVKTLQIAVGNGRYYGGGMAVRHNAEIDDAHLDLYSLE HHHHHHCCCCEEEEEEECCCCEEEEEEEEEECCCEEECCCEEEEECCCCCCCEEEEEEEH IGRVWKLLAMAYDFRKGRHGLWQEVRASRDTSFEIRTRRPRPINADGELVTFTPARFSVL HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECCHHHHCC PRAVTVFVPNTDRQAGT CEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961792; 8969508; 9384377 [H]