| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ygjT [C]
Identifier: 146339822
GI number: 146339822
Start: 3025668
End: 3026645
Strand: Reverse
Name: ygjT [C]
Synonym: BRADO2823
Alternate gene names: 146339822
Gene position: 3026645-3025668 (Counterclockwise)
Preceding gene: 146339825
Following gene: 146339821
Centisome position: 40.59
GC content: 62.78
Gene sequence:
>978_bases GTGGAATTCCTGCTCATCGCGTTTGCTGGCAAGCCTGTCTGGATGTGGCTTGCCTTTCTCGCAATCGTGCTCGCCCTCCT CGTTTTCGATCTCGGCATCGTCCATCGCAAGACGCGCGAAATCACCGTGCGTGAAAGCCTCGTGATGAGCGCCGTCTACA TCATGCTCGCGCTCGTCTTTGGCGCCTGGGTGTGGTGGCAGCTCGGCGCCGAGGCCGGCACCGCCTATCTCACCGCCTTT ACGATCGAGAAGGCGCTGGCGATGGACAACGTCTTCGTCATCGCGATGATCTTCAGCTATTTCGCGATCCCGCGCGCCTA TCAGCACCGCGTGCTGTTCTGGGGCATCGTCGGCGTCATCGTGCTGCGCGCCGTCATGATCGGCCTCGGCGCCGCCATCG TTGCGCAGGCAAGCTGGATCCTCTACGTGTTCGCGCTGTTCCTGATCGCGACCGGCGTCAAGATGCTGGTGTTCAAGGAC AAGCCGCATGACCTCGGCTCCAACCCCGCGCTGGTCTGGGTGCGCCGCCGCTTCGACGTCACCGAGCAGCTGCACGAGGA GCGTTTCTTCGTGCGCCAGAAGGACGCGAGCGGCAAGCCGACCCTGTTCATGACGCCCCTCTTCCTGGCGCTGATCCTGA TCGAGTTCGCCGACATCATCTTCGCCGTCGACTCTGTGCCCGCGATCTTCGCGATCTCGACTGATCCGTTCGTGGTGTAC ACCTCGAACATCTTCGCGATCCTGGGTCTGCGCGCGCTGTACTTCGCGCTGGCTGCGATGGTCGACCGCTTCCAATATTT GAAGCTGGCGCTCGCCGCCGTGCTGATCTTCATCGGCTCGAAGATCTTCCTCGCCGACCTGCTGGGGCTGGAGAAGTTTC CGCCGGCACTCTCGCTCGGCATCACCTTCGGTCTGCTCGGCGCAGGCATCGCCTATTCGCTGTGGAAGACGCGGCCTGCG GCCGAGCCGGTGAAGTGA
Upstream 100 bases:
>100_bases GCGTACCCCTGGTCCGGGCCCCTCTGGTGAAGCTGCCGGTGCGCTCACGATGTCGGACCTGACGACATCAACCTCACCGG CATGATCAAGAGGACCCGTC
Downstream 100 bases:
>100_bases GAAACGGGAGATGACGGCGTGGCGATGAACGATGCCGCTTCCAGCGATGAGGTCGCATCATCCGGGCCGCGCCGTCACAA CGGTCCGATCAGCCGGCGCC
Product: TerC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MEFLLIAFAGKPVWMWLAFLAIVLALLVFDLGIVHRKTREITVRESLVMSAVYIMLALVFGAWVWWQLGAEAGTAYLTAF TIEKALAMDNVFVIAMIFSYFAIPRAYQHRVLFWGIVGVIVLRAVMIGLGAAIVAQASWILYVFALFLIATGVKMLVFKD KPHDLGSNPALVWVRRRFDVTEQLHEERFFVRQKDASGKPTLFMTPLFLALILIEFADIIFAVDSVPAIFAISTDPFVVY TSNIFAILGLRALYFALAAMVDRFQYLKLALAAVLIFIGSKIFLADLLGLEKFPPALSLGITFGLLGAGIAYSLWKTRPA AEPVK
Sequences:
>Translated_325_residues MEFLLIAFAGKPVWMWLAFLAIVLALLVFDLGIVHRKTREITVRESLVMSAVYIMLALVFGAWVWWQLGAEAGTAYLTAF TIEKALAMDNVFVIAMIFSYFAIPRAYQHRVLFWGIVGVIVLRAVMIGLGAAIVAQASWILYVFALFLIATGVKMLVFKD KPHDLGSNPALVWVRRRFDVTEQLHEERFFVRQKDASGKPTLFMTPLFLALILIEFADIIFAVDSVPAIFAISTDPFVVY TSNIFAILGLRALYFALAAMVDRFQYLKLALAAVLIFIGSKIFLADLLGLEKFPPALSLGITFGLLGAGIAYSLWKTRPA AEPVK >Mature_325_residues MEFLLIAFAGKPVWMWLAFLAIVLALLVFDLGIVHRKTREITVRESLVMSAVYIMLALVFGAWVWWQLGAEAGTAYLTAF TIEKALAMDNVFVIAMIFSYFAIPRAYQHRVLFWGIVGVIVLRAVMIGLGAAIVAQASWILYVFALFLIATGVKMLVFKD KPHDLGSNPALVWVRRRFDVTEQLHEERFFVRQKDASGKPTLFMTPLFLALILIEFADIIFAVDSVPAIFAISTDPFVVY TSNIFAILGLRALYFALAAMVDRFQYLKLALAAVLIFIGSKIFLADLLGLEKFPPALSLGITFGLLGAGIAYSLWKTRPA AEPVK
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=306, Percent_Identity=44.7712418300654, Blast_Score=248, Evalue=3e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 36196; Mature: 36196
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLLIAFAGKPVWMWLAFLAIVLALLVFDLGIVHRKTREITVRESLVMSAVYIMLALVF CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAWVWWQLGAEAGTAYLTAFTIEKALAMDNVFVIAMIFSYFAIPRAYQHRVLFWGIVGVI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VLRAVMIGLGAAIVAQASWILYVFALFLIATGVKMLVFKDKPHDLGSNPALVWVRRRFDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEHHHHH TEQLHEERFFVRQKDASGKPTLFMTPLFLALILIEFADIIFAVDSVPAIFAISTDPFVVY HHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE TSNIFAILGLRALYFALAAMVDRFQYLKLALAAVLIFIGSKIFLADLLGLEKFPPALSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH ITFGLLGAGIAYSLWKTRPAAEPVK HHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEFLLIAFAGKPVWMWLAFLAIVLALLVFDLGIVHRKTREITVRESLVMSAVYIMLALVF CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAWVWWQLGAEAGTAYLTAFTIEKALAMDNVFVIAMIFSYFAIPRAYQHRVLFWGIVGVI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VLRAVMIGLGAAIVAQASWILYVFALFLIATGVKMLVFKDKPHDLGSNPALVWVRRRFDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEHHHHH TEQLHEERFFVRQKDASGKPTLFMTPLFLALILIEFADIIFAVDSVPAIFAISTDPFVVY HHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE TSNIFAILGLRALYFALAAMVDRFQYLKLALAAVLIFIGSKIFLADLLGLEKFPPALSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH ITFGLLGAGIAYSLWKTRPAAEPVK HHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA