| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339813
Identifier: 146339813
GI number: 146339813
Start: 3016540
End: 3017487
Strand: Direct
Name: 146339813
Synonym: BRADO2814
Alternate gene names: NA
Gene position: 3016540-3017487 (Clockwise)
Preceding gene: 146339806
Following gene: 146339814
Centisome position: 40.45
GC content: 67.3
Gene sequence:
>948_bases TTGCGCTCGGGGTCAATCGTGCGCGCGGGTCAGATTTTTTCGAATTGGATCGTTCGACGCAGGCCGTGGTCGCCAACCAC GTTTCTGCTCACGGCTGTTGCCGTCGCTCTGTCCACTGCGAGTCGCGCCGGGCTCGACGAGGCCGGTGCGACACTGTCCT ATGCGCCGTTCTTTCCGGCCATTCTGTTCGCGACGCTGGTCGGCGGACTGCCGGCGGCCATTTTTGCCGCGTGGCTGTCG GCCGCGGTCGTGCTGATCGGCTTCACCGATCGTCCGGGTCATGAGGAGGCGGTCAATCTCGTCGCGTTTCTCGCGGCGTC GGCGCTGGTCATCTGGCTCGCCAATCTCTGTCGCGACGCGCTGTTGGAGCTGAAGCGCAGCGAGCTTGCGCGCGAGCTGC TGCTCGCCGAGCTCAGGCATCGCGTCAATAATCAGCTGGCGGTGTTCCAATCGATCGTCCGCTCCAGCCTGTCGAATGAG GATCACGACAAGGGGGAGGCGATCGCGCTCCGGCTCGATGCGGTCGCGCGCGCCAACACGATCGCGTGGTCGAGCCAGCG CGTCATGACGCTGCGCATGCTGCTCGATGCCGAGCTGCAGCCCTATCGCGCCTCCGGCCTGGTGGCGGTGGAGGGACCGG ACCTGCCGCTCGGCCCCGAGGCGATCCGCAATCTTGCGCTGGTGTTTCACGAGCTCGCGACCAACGCGGTGAAGTACGGA GCGCTGCGCGGCGATCGCGGCCGGCTCGAGGTGCTGCTCGCGCAGGATGGCGGACGCAGCTCCGTCACCTGGCGCGAGCT GTCGGGCCATCCCGTCACGCCGCCGGCGGGCGAGGGGTTCGGCACGCGCATGATCCGCGCCAGCCTCGCGGCCATCGGCG GCAGCATCGAGCAGGATTATCGCGAGATTGGTCTCGTGTGCCGCATCAGGTTCGATGCGGACGTGTAG
Upstream 100 bases:
>100_bases CAATGCAGCTCAACGCAACTACACGAAAAAAGTTCCAAAAATTTTGAGTGGCTTCGGCAGTTCCTTTGAGCTTGTTCCGC AGCACACCCGGCGATAGACC
Downstream 100 bases:
>100_bases TCCGTTTGCCGGCGTGCCGATCCATCGCCCGGATCCGCATCGACGAGGTGATGAGGTTCCTCGTGGGACGAGGTCGGTTC CATGATTGCCGGTCTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MRSGSIVRAGQIFSNWIVRRRPWSPTTFLLTAVAVALSTASRAGLDEAGATLSYAPFFPAILFATLVGGLPAAIFAAWLS AAVVLIGFTDRPGHEEAVNLVAFLAASALVIWLANLCRDALLELKRSELARELLLAELRHRVNNQLAVFQSIVRSSLSNE DHDKGEAIALRLDAVARANTIAWSSQRVMTLRMLLDAELQPYRASGLVAVEGPDLPLGPEAIRNLALVFHELATNAVKYG ALRGDRGRLEVLLAQDGGRSSVTWRELSGHPVTPPAGEGFGTRMIRASLAAIGGSIEQDYREIGLVCRIRFDADV
Sequences:
>Translated_315_residues MRSGSIVRAGQIFSNWIVRRRPWSPTTFLLTAVAVALSTASRAGLDEAGATLSYAPFFPAILFATLVGGLPAAIFAAWLS AAVVLIGFTDRPGHEEAVNLVAFLAASALVIWLANLCRDALLELKRSELARELLLAELRHRVNNQLAVFQSIVRSSLSNE DHDKGEAIALRLDAVARANTIAWSSQRVMTLRMLLDAELQPYRASGLVAVEGPDLPLGPEAIRNLALVFHELATNAVKYG ALRGDRGRLEVLLAQDGGRSSVTWRELSGHPVTPPAGEGFGTRMIRASLAAIGGSIEQDYREIGLVCRIRFDADV >Mature_315_residues MRSGSIVRAGQIFSNWIVRRRPWSPTTFLLTAVAVALSTASRAGLDEAGATLSYAPFFPAILFATLVGGLPAAIFAAWLS AAVVLIGFTDRPGHEEAVNLVAFLAASALVIWLANLCRDALLELKRSELARELLLAELRHRVNNQLAVFQSIVRSSLSNE DHDKGEAIALRLDAVARANTIAWSSQRVMTLRMLLDAELQPYRASGLVAVEGPDLPLGPEAIRNLALVFHELATNAVKYG ALRGDRGRLEVLLAQDGGRSSVTWRELSGHPVTPPAGEGFGTRMIRASLAAIGGSIEQDYREIGLVCRIRFDADV
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 34001; Mature: 34001
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGSIVRAGQIFSNWIVRRRPWSPTTFLLTAVAVALSTASRAGLDEAGATLSYAPFFPA CCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHH ILFATLVGGLPAAIFAAWLSAAVVLIGFTDRPGHEEAVNLVAFLAASALVIWLANLCRDA HHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLELKRSELARELLLAELRHRVNNQLAVFQSIVRSSLSNEDHDKGEAIALRLDAVARANT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHH IAWSSQRVMTLRMLLDAELQPYRASGLVAVEGPDLPLGPEAIRNLALVFHELATNAVKYG HEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC ALRGDRGRLEVLLAQDGGRSSVTWRELSGHPVTPPAGEGFGTRMIRASLAAIGGSIEQDY CCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH REIGLVCRIRFDADV HHHCEEEEEEECCCC >Mature Secondary Structure MRSGSIVRAGQIFSNWIVRRRPWSPTTFLLTAVAVALSTASRAGLDEAGATLSYAPFFPA CCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCEEHHHHHH ILFATLVGGLPAAIFAAWLSAAVVLIGFTDRPGHEEAVNLVAFLAASALVIWLANLCRDA HHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLELKRSELARELLLAELRHRVNNQLAVFQSIVRSSLSNEDHDKGEAIALRLDAVARANT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHH IAWSSQRVMTLRMLLDAELQPYRASGLVAVEGPDLPLGPEAIRNLALVFHELATNAVKYG HEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC ALRGDRGRLEVLLAQDGGRSSVTWRELSGHPVTPPAGEGFGTRMIRASLAAIGGSIEQDY CCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH REIGLVCRIRFDADV HHHCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA