| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is purC
Identifier: 146339776
GI number: 146339776
Start: 2985969
End: 2986736
Strand: Direct
Name: purC
Synonym: BRADO2776
Alternate gene names: 146339776
Gene position: 2985969-2986736 (Clockwise)
Preceding gene: 146339774
Following gene: 146339777
Centisome position: 40.04
GC content: 62.11
Gene sequence:
>768_bases ATGAGCCGTCGGCGTCGCATTTATGAAGGCAAGGCCAAGGTCCTGTACGAAGGTCCCGAGCCGGGCACCCTGATCCAGCA CTTCAAGGACGACGCCACCGCCTTCAATGCCAAGAAGCACCAGGTGATCGAAGGCAAGGGCGTCCTCAACAACCGCATCT CGGAGTACCTGTTTCAGCACCTCAACGACATCGGGGTGCCGACCCACTTCATCCGCCGCCTCAACATGCGCGAGCAGCTG ATTCGCGAGGTCGAGATCGTCCCGCTCGAGGTCGTGGTGCGCAACGTTGCGGCGGGTTCGCTGTCGCAGCGCCTGGGCAT CGAGGAGGGCACCCAGCTGCCGCGTTCGATCATCGAATTCTATTACAAGAACGACCAGCTCAACGACCCCATGGTGTCGG AGGAGCACATCACCGCGTTCGGCTGGGCCACGCCCCAGGAGATCGACGACATCATGGCGCTCGCCATTCGCGTCAACGAC TTCCTGACCGGGCTCTTCCTCGGCATCGGCATCCGCCTGGTCGACTTCAAGATGGAATGCGGCCGGCTGTTCGAGAACGA GATGATGCGGATCATCGTCGCCGACGAGATTTCCCCCGATTCGTGCCGGCTGTGGGACATCAAGTCGAACGAGAAGCTCG ACAAGGACCGCTTCCGTCGTGATCTTGGCGGCCTCCTGGAGGCCTATACCGAGGTCGCCAAGCGGCTCGGCATCCTGATG GAGAACGAGCGTCCGGCGGGCTCCGGCCCGGTCCTGGTCAAGAGCTAA
Upstream 100 bases:
>100_bases CGTCACGATCCGGGCCCTCGCGGCAGCTCCGTCGTGGTCCTGTCCAAAGTCATCCGGAGCCCACCATTTCATGGATTTCA ACAAAACACGGTACATCCCA
Downstream 100 bases:
>100_bases AGGGAATCAAGACGTGAAAGCGCGTGTCACGGTGACACTGAAAACCGGCATCCTCGATCCCCAGGGCAAGGCGATCGAGG GCGCCCTCAAATCGCTCGGC
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase A
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHQVIEGKGVLNNRISEYLFQHLNDIGVPTHFIRRLNMREQL IREVEIVPLEVVVRNVAAGSLSQRLGIEEGTQLPRSIIEFYYKNDQLNDPMVSEEHITAFGWATPQEIDDIMALAIRVND FLTGLFLGIGIRLVDFKMECGRLFENEMMRIIVADEISPDSCRLWDIKSNEKLDKDRFRRDLGGLLEAYTEVAKRLGILM ENERPAGSGPVLVKS
Sequences:
>Translated_255_residues MSRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHQVIEGKGVLNNRISEYLFQHLNDIGVPTHFIRRLNMREQL IREVEIVPLEVVVRNVAAGSLSQRLGIEEGTQLPRSIIEFYYKNDQLNDPMVSEEHITAFGWATPQEIDDIMALAIRVND FLTGLFLGIGIRLVDFKMECGRLFENEMMRIIVADEISPDSCRLWDIKSNEKLDKDRFRRDLGGLLEAYTEVAKRLGILM ENERPAGSGPVLVKS >Mature_254_residues SRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHQVIEGKGVLNNRISEYLFQHLNDIGVPTHFIRRLNMREQLI REVEIVPLEVVVRNVAAGSLSQRLGIEEGTQLPRSIIEFYYKNDQLNDPMVSEEHITAFGWATPQEIDDIMALAIRVNDF LTGLFLGIGIRLVDFKMECGRLFENEMMRIIVADEISPDSCRLWDIKSNEKLDKDRFRRDLGGLLEAYTEVAKRLGILME NERPAGSGPVLVKS
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Homo sapiens, GI119220557, Length=256, Percent_Identity=32.421875, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI5453539, Length=256, Percent_Identity=32.421875, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI119220559, Length=263, Percent_Identity=31.1787072243346, Blast_Score=103, Evalue=1e-22, Organism=Escherichia coli, GI1788820, Length=241, Percent_Identity=41.49377593361, Blast_Score=206, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17531275, Length=243, Percent_Identity=30.4526748971193, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI18860083, Length=237, Percent_Identity=29.1139240506329, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24583917, Length=207, Percent_Identity=26.5700483091787, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR71_BRAJA (Q89IB0)
Other databases:
- EMBL: BA000040 - RefSeq: NP_772369.1 - ProteinModelPortal: Q89IB0 - SMR: Q89IB0 - GeneID: 1048812 - GenomeReviews: BA000040_GR - KEGG: bja:bll5729 - NMPDR: fig|224911.1.peg.5729 - HOGENOM: HBG306070 - OMA: YKDDALG - PhylomeDB: Q89IB0 - ProtClustDB: PRK09362 - BioCyc: BJAP224911:BLL5729-MONOMER - BRENDA: 6.3.2.6 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 29186; Mature: 29055
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHQVIEGKGVLNNRISEYLFQH CCCCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHH LNDIGVPTHFIRRLNMREQLIREVEIVPLEVVVRNVAAGSLSQRLGIEEGTQLPRSIIEF HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YYKNDQLNDPMVSEEHITAFGWATPQEIDDIMALAIRVNDFLTGLFLGIGIRLVDFKMEC HHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHHH GRLFENEMMRIIVADEISPDSCRLWDIKSNEKLDKDRFRRDLGGLLEAYTEVAKRLGILM HHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE ENERPAGSGPVLVKS CCCCCCCCCCEEECC >Mature Secondary Structure SRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHQVIEGKGVLNNRISEYLFQH CCCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHH LNDIGVPTHFIRRLNMREQLIREVEIVPLEVVVRNVAAGSLSQRLGIEEGTQLPRSIIEF HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YYKNDQLNDPMVSEEHITAFGWATPQEIDDIMALAIRVNDFLTGLFLGIGIRLVDFKMEC HHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHHH GRLFENEMMRIIVADEISPDSCRLWDIKSNEKLDKDRFRRDLGGLLEAYTEVAKRLGILM HHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEE ENERPAGSGPVLVKS CCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275