| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339748
Identifier: 146339748
GI number: 146339748
Start: 2955316
End: 2955852
Strand: Reverse
Name: 146339748
Synonym: BRADO2748
Alternate gene names: NA
Gene position: 2955852-2955316 (Counterclockwise)
Preceding gene: 146339749
Following gene: 146339746
Centisome position: 39.64
GC content: 63.5
Gene sequence:
>537_bases ATGCCGTCTCATATCCGCTCTCTGGGCAGTCTCGCGCTCGCGCTGATTGCCACGATGTCCGTCACGATGTCTTCGCCATC GGCACAAGCCGGCGATGCAGCTCCCGTCGGAGGCAGGTTCAGCTGCAAGAACGACGAAGAGCACAAGAACCGGGTGGACG GTGATCCCGCCCACGAGCTCATTCTGCTGAGATCGAAATGCGATGGTCGGGCCTCCGGCGCGTCGGCCCGCTTCGACGGC GGTCAGGTCGTGATGGTCGAGCTCGATGATCTCGTGCGCGGCAACGGCACGCTACGCGGCTACGATCACATCAAATATCC TGATGGGAGCGTGCAGATGGACAGCTATATCGGCCAGCAGACCACGACCGTGGTGAACGGCAAGCAGGAGTGGACCGCCG TCGGCACCTGGGAGCAGACCGCGGGAACGCGCGGCTTGGCTGGCGCGCATCTGCGCGGCACGTGGACCGCCAAATCCACA TCCGAGACCGAATACGTCATCGATTGGGAAGGCGCGCCCGCCGAGATCACTCCGTAA
Upstream 100 bases:
>100_bases GCCCTGGTCCGAACCGGCCCATCATGGCTCGGTGCGGCGGTCGGCCGCGACAGGGCGCATCCCGCCGGACACCGCGGTCG GTCCGTGTCAGGAGGTTCAC
Downstream 100 bases:
>100_bases CAGGCCGACCTTGTTTCGCCCTGATGACAATCTGCGTAGCCCGGATGAGCGCAGCGACATCCGGGTTCATCGCAACAGCT CGTGCGATCCCGGATGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPSHIRSLGSLALALIATMSVTMSSPSAQAGDAAPVGGRFSCKNDEEHKNRVDGDPAHELILLRSKCDGRASGASARFDG GQVVMVELDDLVRGNGTLRGYDHIKYPDGSVQMDSYIGQQTTTVVNGKQEWTAVGTWEQTAGTRGLAGAHLRGTWTAKST SETEYVIDWEGAPAEITP
Sequences:
>Translated_178_residues MPSHIRSLGSLALALIATMSVTMSSPSAQAGDAAPVGGRFSCKNDEEHKNRVDGDPAHELILLRSKCDGRASGASARFDG GQVVMVELDDLVRGNGTLRGYDHIKYPDGSVQMDSYIGQQTTTVVNGKQEWTAVGTWEQTAGTRGLAGAHLRGTWTAKST SETEYVIDWEGAPAEITP >Mature_177_residues PSHIRSLGSLALALIATMSVTMSSPSAQAGDAAPVGGRFSCKNDEEHKNRVDGDPAHELILLRSKCDGRASGASARFDGG QVVMVELDDLVRGNGTLRGYDHIKYPDGSVQMDSYIGQQTTTVVNGKQEWTAVGTWEQTAGTRGLAGAHLRGTWTAKSTS ETEYVIDWEGAPAEITP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18934; Mature: 18803
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHIRSLGSLALALIATMSVTMSSPSAQAGDAAPVGGRFSCKNDEEHKNRVDGDPAHEL CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCEE ILLRSKCDGRASGASARFDGGQVVMVELDDLVRGNGTLRGYDHIKYPDGSVQMDSYIGQQ EEEECCCCCCCCCCCEEECCCCEEEEEECHHHCCCCCEECCCCEECCCCCEEHHHHCCCC TTTVVNGKQEWTAVGTWEQTAGTRGLAGAHLRGTWTAKSTSETEYVIDWEGAPAEITP EEEEECCCCCEEEECCCHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure PSHIRSLGSLALALIATMSVTMSSPSAQAGDAAPVGGRFSCKNDEEHKNRVDGDPAHEL CHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCEE ILLRSKCDGRASGASARFDGGQVVMVELDDLVRGNGTLRGYDHIKYPDGSVQMDSYIGQQ EEEECCCCCCCCCCCEEECCCCEEEEEECHHHCCCCCEECCCCEECCCCCEEHHHHCCCC TTTVVNGKQEWTAVGTWEQTAGTRGLAGAHLRGTWTAKSTSETEYVIDWEGAPAEITP EEEEECCCCCEEEECCCHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA