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The map label for this gene is cycH [H]

Identifier: 146339734

GI number: 146339734

Start: 2934166

End: 2935266

Strand: Direct

Name: cycH [H]

Synonym: BRADO2732

Alternate gene names: 146339734

Gene position: 2934166-2935266 (Clockwise)

Preceding gene: 146339733

Following gene: 146339735

Centisome position: 39.35

GC content: 69.75

Gene sequence:

>1101_bases
ATGACGTTGTGGTTCGTGTTCGCCGTGATGACGGCCGCGGCGATCTTCGCCGTGCTGCTTCCGCTCGGGCTCGGCGCGCG
CAACCTCGCGGATGGACGCGAGGCCGCGGTCTACAAGGACCAGCTGGCCGAAATCGAGCGCGATGTCGAAAACGGGCTGA
TCGGCAAGGTCGAGGCGGAGGCCGCGCGGGTCGAGATCGGCCGTCGCCTGCTGGCCGCGGCCGACCAGGAGAGCGAGGTC
GCGGCGAAGCCGAGCATGGGTCTGCGCCGCGTCGCCGCCGTGCTGGCGCTGATCGGCGTGCCGATCGTGGCGCTCGCAGT
TTATCTCCCGCTCGGCTCGCCGCAATTGCCGGACTTTCCGCTCACCGCCCGCGCCACGACGCCCGATGGCTCGCAGCCGC
TGGAAAACTTGGTCTCGCAGGTCGAGCAGCATCTGCAGAAGAACCCGACCGACGGCCGCGGCTGGACGGTGCTCGCCCCG
GTGCTGGCGCGTCTTGGCCGCACCGAGGACGCGATCCGCGCCTATCGCAACATGATCACCTATGCCGGCGACGGCGCCGC
CAAGCGCGCCGATCTCGGCGAGGTGATCGCCGCCGCCGCCGGTGGCGTTGTCACCGCCGAGGCCAAGGCGGAGTTCGAGC
GCGGCCATGCGCTCGACGCCGACGAGCCCAAATCCAACTATTATCTCGGCCTGGCCGCCGAGCAGGACGGCCGCAAGGAC
GATGCCGCCAACATCTGGCGGGCCATGCTCAGCAAGGGCCCGGCGGATGCGCCATGGCGGCCGCTGGTGGCGGCCGCGCT
CGCCCGGGTGGGCGGCGGCGAGGCTCCGGCGCTGCCGAACGAGGCGATGGCCGCCGCCAAGGACATGAATGCCGATGACC
GCGACGCGATGATCCGCGGCATGGTCGACCGGCTCGCGACGCGGCTGAAGCAGAATGGCGACGATGCCGAGGGCTGGCTG
CGGCTGGTGCGCGCTTATGTCGTGCTCGGTGATCTCGACAAGGCCAAGTCAGCGTTATCTGACGCAAGGCAGGCTGTGAA
GGATGCCGAGCGGTTGCGCCAGCTCAACGAGGGCGTGAAGACGTTCGGGCTGGATGGATGA

Upstream 100 bases:

>100_bases
CCGGGAACGGTGCTGGGTAAAAGCGCGCCTGGGCGCCTGCCGGTGGGCGCTGAACGGAACTCTGCCCGATGACGCTCTGT
CCGATGATGCGTTGGCTCCG

Downstream 100 bases:

>100_bases
GGAGCGGCGCATCGGCCGCGAACGGGATGTTGGGATGACACGCAAGCAGAGGCGTTTGACGATCATCGGCGGGGCGCTGT
TCGTGCTCGCGGTCGCGGCC

Product: cytochrome c-type biogenesis protein cycH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTLWFVFAVMTAAAIFAVLLPLGLGARNLADGREAAVYKDQLAEIERDVENGLIGKVEAEAARVEIGRRLLAAADQESEV
AAKPSMGLRRVAAVLALIGVPIVALAVYLPLGSPQLPDFPLTARATTPDGSQPLENLVSQVEQHLQKNPTDGRGWTVLAP
VLARLGRTEDAIRAYRNMITYAGDGAAKRADLGEVIAAAAGGVVTAEAKAEFERGHALDADEPKSNYYLGLAAEQDGRKD
DAANIWRAMLSKGPADAPWRPLVAAALARVGGGEAPALPNEAMAAAKDMNADDRDAMIRGMVDRLATRLKQNGDDAEGWL
RLVRAYVVLGDLDKAKSALSDARQAVKDAERLRQLNEGVKTFGLDG

Sequences:

>Translated_366_residues
MTLWFVFAVMTAAAIFAVLLPLGLGARNLADGREAAVYKDQLAEIERDVENGLIGKVEAEAARVEIGRRLLAAADQESEV
AAKPSMGLRRVAAVLALIGVPIVALAVYLPLGSPQLPDFPLTARATTPDGSQPLENLVSQVEQHLQKNPTDGRGWTVLAP
VLARLGRTEDAIRAYRNMITYAGDGAAKRADLGEVIAAAAGGVVTAEAKAEFERGHALDADEPKSNYYLGLAAEQDGRKD
DAANIWRAMLSKGPADAPWRPLVAAALARVGGGEAPALPNEAMAAAKDMNADDRDAMIRGMVDRLATRLKQNGDDAEGWL
RLVRAYVVLGDLDKAKSALSDARQAVKDAERLRQLNEGVKTFGLDG
>Mature_365_residues
TLWFVFAVMTAAAIFAVLLPLGLGARNLADGREAAVYKDQLAEIERDVENGLIGKVEAEAARVEIGRRLLAAADQESEVA
AKPSMGLRRVAAVLALIGVPIVALAVYLPLGSPQLPDFPLTARATTPDGSQPLENLVSQVEQHLQKNPTDGRGWTVLAPV
LARLGRTEDAIRAYRNMITYAGDGAAKRADLGEVIAAAAGGVVTAEAKAEFERGHALDADEPKSNYYLGLAAEQDGRKDD
AANIWRAMLSKGPADAPWRPLVAAALARVGGGEAPALPNEAMAAAKDMNADDRDAMIRGMVDRLATRLKQNGDDAEGWLR
LVRAYVVLGDLDKAKSALSDARQAVKDAERLRQLNEGVKTFGLDG

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38890; Mature: 38759

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLWFVFAVMTAAAIFAVLLPLGLGARNLADGREAAVYKDQLAEIERDVENGLIGKVEAE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AARVEIGRRLLAAADQESEVAAKPSMGLRRVAAVLALIGVPIVALAVYLPLGSPQLPDFP
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LTARATTPDGSQPLENLVSQVEQHLQKNPTDGRGWTVLAPVLARLGRTEDAIRAYRNMIT
CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
YAGDGAAKRADLGEVIAAAAGGVVTAEAKAEFERGHALDADEPKSNYYLGLAAEQDGRKD
HCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
DAANIWRAMLSKGPADAPWRPLVAAALARVGGGEAPALPNEAMAAAKDMNADDRDAMIRG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
MVDRLATRLKQNGDDAEGWLRLVRAYVVLGDLDKAKSALSDARQAVKDAERLRQLNEGVK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFGLDG
HCCCCC
>Mature Secondary Structure 
TLWFVFAVMTAAAIFAVLLPLGLGARNLADGREAAVYKDQLAEIERDVENGLIGKVEAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AARVEIGRRLLAAADQESEVAAKPSMGLRRVAAVLALIGVPIVALAVYLPLGSPQLPDFP
HHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LTARATTPDGSQPLENLVSQVEQHLQKNPTDGRGWTVLAPVLARLGRTEDAIRAYRNMIT
CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
YAGDGAAKRADLGEVIAAAAGGVVTAEAKAEFERGHALDADEPKSNYYLGLAAEQDGRKD
HCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
DAANIWRAMLSKGPADAPWRPLVAAALARVGGGEAPALPNEAMAAAKDMNADDRDAMIRG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
MVDRLATRLKQNGDDAEGWLRLVRAYVVLGDLDKAKSALSDARQAVKDAERLRQLNEGVK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFGLDG
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8231805; 12597275 [H]