Click here to switch to the map view.

The map label for this gene is mcpC [H]

Identifier: 146339628

GI number: 146339628

Start: 2810619

End: 2812406

Strand: Reverse

Name: mcpC [H]

Synonym: BRADO2621

Alternate gene names: 146339628

Gene position: 2812406-2810619 (Counterclockwise)

Preceding gene: 146339632

Following gene: 146339622

Centisome position: 37.72

GC content: 66.83

Gene sequence:

>1788_bases
ATGAACAACCTTCCCTGCGTCGCAGTCTCACATCCGCTGGTATTCCACCGCATGACCTCACGTTCGACGTCAACGACGAC
GGCCACACGCCACTCCATCGCAATCAAGCTGTACGCCATCTTCGCGCTGTTTGCGTTGCTGACCGCCGCGATCACCTGGC
TGTCCGATTACAATTCGCGGCGCGCGGCCGAGCTCACCAAGGCGATCGAGACGGCGAATCTCGCGGCGCTCAACGTGCAG
TCGGTCAATGGGCTGGTCTACGCGGTCGTCATGGAGTCGCGCGGCGTCTACATGTCCACAGATCCCGCGGTCGTGAAGCG
CTATGGCGACGGGCTGCTCAAGTTCAATGCCGAGATCCTGAAGATCGTCGACAAATGGCAGGCCATCGTTCAGGCCGACG
ATGCGCAGCAGTTCGCGACCTTCAAGAAGCGGATCGAGCAGTTCGTCGACTTCCGCAAGGAGCTGGTGCGTCGCGCCAAT
GAGATCAGCCCGGCGGCGGGCCGCGAATGGGGCGACAACGACGCCAATCGCTCGGTCCGCTCCGCTTTGAATAAGGATCT
CGACGAGCTCTCCAAGGTCTATCTGGAGCGCGGTCGCAGGATCGGCGAGGACACCGAGATCAACCGCAAGCTCTCGCTGG
TGCTCACCGCGCTCGGCGGCGTGATGCTGCTGCTGGTCGTCGCCGGCGTCGTGATCATCGCCCGCTCGATCGCCCGCCCG
CTGTCGCAGATCACCGAAACCATCCGCCAGGTCGCGACCGGCGCAGAGAATGTCGAGGTGCCGCATGCCGGCCGGGCCGA
CGAGGTCGGCGAGCTCGCCCGGGCCATTGGCGTGTTCCAGCAGGCCATGGCGCACAACCGCGATCTCAACGTCCAGGTCT
CGCAGGACTCGGAGATCCGCGAAGCGCGCGCGCGCCACATCGAGGCCGCAGTCGAGGAATTCCGCACCGCCATCGGCGGG
GTGATGCGCACCGTCACCGAGAACGCGGCCGCCATGCGCAACACCGCCGAGACCATCACGCGGCTGACGGCGGATGCCAA
CGAGCGCGCGGTCACCGCAGCCGGCGCCACGTCGCAGGCCTCGACCAACGTCTCCGCCGTCGCCAGCGCCGCCGAGGAGC
TGTCCGCTTCGGTCGAGGAGATCGGCCGCCAGATCCGTCAGTCCGCCGGCGCGGTCGAGCAGACCGGCCAGCGCACCGTG
AAGTCGATCACCGAGATCGAGGGCCTCGCCGCCGCCACCCAGCGCATCGACGGCGTCCTGACCCTGATCCAGACCATTGC
GGAGCAGACCAACCTGCTCGCTCTCAACGCCACCATCGAGGCCGCGCGCGCCGGCGAGGCCGGCCGCGGCTTCGCCGTCG
TCGCCCATGAGGTCAAGGCGCTCGCCGGCCAGACGGCGAAGGCGACCGAGGAGATCAGCGAGAATGTCGGCCTGATCCAG
GCGTCGACCAAGACCGCGGTCGACGCGGTTCGTGAGATCGGCCAGGCGGTGCGCGGCATCAACGAGATCACGACGAATAT
TTCCAATGCCATCCAGCAGCAGGATCAGGCCACCCGCGAGATCTCCGCCAACGCGCAGTCGACGGCGCATGGCAATCAGA
CGCTGGTCCAGAACATCGGCTCGCTGCGCGACGCCATCGGCGAGACCTCGACCGCTGCGGCCTCCGTCCTGTCGGCCTCC
GGCGACCTCAACTCGACGGCGCAGACGCTGGCGCATGAGGTGGAGAAATTCTTCCGGAATCTGCGCTCTGGCCCGGCCGC
CGAAGCCAGGCTGCGCAAGGCGAGCTGA

Upstream 100 bases:

>100_bases
GGGCTAATTGATTGAAAAGAAACGCGAAGTACGCAAGGGTTGCATCGGACTGACAATGTCCACTTAACGCTTTCTCCATG
AAGCTTTTGCATAACTATTA

Downstream 100 bases:

>100_bases
TCCCAATTGCAGGCCGGCCGCCGGCCTCAGGCGGGCGCCGGCTCGCGATCGGAAAACGCCACGATCGGTGCCGCCGCAAG
CAGCGCCTTGGTGTAGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MNNLPCVAVSHPLVFHRMTSRSTSTTTATRHSIAIKLYAIFALFALLTAAITWLSDYNSRRAAELTKAIETANLAALNVQ
SVNGLVYAVVMESRGVYMSTDPAVVKRYGDGLLKFNAEILKIVDKWQAIVQADDAQQFATFKKRIEQFVDFRKELVRRAN
EISPAAGREWGDNDANRSVRSALNKDLDELSKVYLERGRRIGEDTEINRKLSLVLTALGGVMLLLVVAGVVIIARSIARP
LSQITETIRQVATGAENVEVPHAGRADEVGELARAIGVFQQAMAHNRDLNVQVSQDSEIREARARHIEAAVEEFRTAIGG
VMRTVTENAAAMRNTAETITRLTADANERAVTAAGATSQASTNVSAVASAAEELSASVEEIGRQIRQSAGAVEQTGQRTV
KSITEIEGLAAATQRIDGVLTLIQTIAEQTNLLALNATIEAARAGEAGRGFAVVAHEVKALAGQTAKATEEISENVGLIQ
ASTKTAVDAVREIGQAVRGINEITTNISNAIQQQDQATREISANAQSTAHGNQTLVQNIGSLRDAIGETSTAAASVLSAS
GDLNSTAQTLAHEVEKFFRNLRSGPAAEARLRKAS

Sequences:

>Translated_595_residues
MNNLPCVAVSHPLVFHRMTSRSTSTTTATRHSIAIKLYAIFALFALLTAAITWLSDYNSRRAAELTKAIETANLAALNVQ
SVNGLVYAVVMESRGVYMSTDPAVVKRYGDGLLKFNAEILKIVDKWQAIVQADDAQQFATFKKRIEQFVDFRKELVRRAN
EISPAAGREWGDNDANRSVRSALNKDLDELSKVYLERGRRIGEDTEINRKLSLVLTALGGVMLLLVVAGVVIIARSIARP
LSQITETIRQVATGAENVEVPHAGRADEVGELARAIGVFQQAMAHNRDLNVQVSQDSEIREARARHIEAAVEEFRTAIGG
VMRTVTENAAAMRNTAETITRLTADANERAVTAAGATSQASTNVSAVASAAEELSASVEEIGRQIRQSAGAVEQTGQRTV
KSITEIEGLAAATQRIDGVLTLIQTIAEQTNLLALNATIEAARAGEAGRGFAVVAHEVKALAGQTAKATEEISENVGLIQ
ASTKTAVDAVREIGQAVRGINEITTNISNAIQQQDQATREISANAQSTAHGNQTLVQNIGSLRDAIGETSTAAASVLSAS
GDLNSTAQTLAHEVEKFFRNLRSGPAAEARLRKAS
>Mature_595_residues
MNNLPCVAVSHPLVFHRMTSRSTSTTTATRHSIAIKLYAIFALFALLTAAITWLSDYNSRRAAELTKAIETANLAALNVQ
SVNGLVYAVVMESRGVYMSTDPAVVKRYGDGLLKFNAEILKIVDKWQAIVQADDAQQFATFKKRIEQFVDFRKELVRRAN
EISPAAGREWGDNDANRSVRSALNKDLDELSKVYLERGRRIGEDTEINRKLSLVLTALGGVMLLLVVAGVVIIARSIARP
LSQITETIRQVATGAENVEVPHAGRADEVGELARAIGVFQQAMAHNRDLNVQVSQDSEIREARARHIEAAVEEFRTAIGG
VMRTVTENAAAMRNTAETITRLTADANERAVTAAGATSQASTNVSAVASAAEELSASVEEIGRQIRQSAGAVEQTGQRTV
KSITEIEGLAAATQRIDGVLTLIQTIAEQTNLLALNATIEAARAGEAGRGFAVVAHEVKALAGQTAKATEEISENVGLIQ
ASTKTAVDAVREIGQAVRGINEITTNISNAIQQQDQATREISANAQSTAHGNQTLVQNIGSLRDAIGETSTAAASVLSAS
GDLNSTAQTLAHEVEKFFRNLRSGPAAEARLRKAS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=297, Percent_Identity=28.6195286195286, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1787690, Length=380, Percent_Identity=28.4210526315789, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI2367378, Length=352, Percent_Identity=27.8409090909091, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788195, Length=241, Percent_Identity=32.3651452282158, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1788194, Length=203, Percent_Identity=33.9901477832512, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 63696; Mature: 63696

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLPCVAVSHPLVFHRMTSRSTSTTTATRHSIAIKLYAIFALFALLTAAITWLSDYNSR
CCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RAAELTKAIETANLAALNVQSVNGLVYAVVMESRGVYMSTDPAVVKRYGDGLLKFNAEIL
HHHHHHHHHHHHHHHEEEHHHHCCEEEEEEECCCCCEECCCHHHHHHHCCCHHHHHHHHH
KIVDKWQAIVQADDAQQFATFKKRIEQFVDFRKELVRRANEISPAAGREWGDNDANRSVR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
SALNKDLDELSKVYLERGRRIGEDTEINRKLSLVLTALGGVMLLLVVAGVVIIARSIARP
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQITETIRQVATGAENVEVPHAGRADEVGELARAIGVFQQAMAHNRDLNVQVSQDSEIR
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH
EARARHIEAAVEEFRTAIGGVMRTVTENAAAMRNTAETITRLTADANERAVTAAGATSQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
STNVSAVASAAEELSASVEEIGRQIRQSAGAVEQTGQRTVKSITEIEGLAAATQRIDGVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIQTIAEQTNLLALNATIEAARAGEAGRGFAVVAHEVKALAGQTAKATEEISENVGLIQ
HHHHHHHHHHCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEE
ASTKTAVDAVREIGQAVRGINEITTNISNAIQQQDQATREISANAQSTAHGNQTLVQNIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SLRDAIGETSTAAASVLSASGDLNSTAQTLAHEVEKFFRNLRSGPAAEARLRKAS
HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure
MNNLPCVAVSHPLVFHRMTSRSTSTTTATRHSIAIKLYAIFALFALLTAAITWLSDYNSR
CCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RAAELTKAIETANLAALNVQSVNGLVYAVVMESRGVYMSTDPAVVKRYGDGLLKFNAEIL
HHHHHHHHHHHHHHHEEEHHHHCCEEEEEEECCCCCEECCCHHHHHHHCCCHHHHHHHHH
KIVDKWQAIVQADDAQQFATFKKRIEQFVDFRKELVRRANEISPAAGREWGDNDANRSVR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
SALNKDLDELSKVYLERGRRIGEDTEINRKLSLVLTALGGVMLLLVVAGVVIIARSIARP
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQITETIRQVATGAENVEVPHAGRADEVGELARAIGVFQQAMAHNRDLNVQVSQDSEIR
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH
EARARHIEAAVEEFRTAIGGVMRTVTENAAAMRNTAETITRLTADANERAVTAAGATSQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
STNVSAVASAAEELSASVEEIGRQIRQSAGAVEQTGQRTVKSITEIEGLAAATQRIDGVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIQTIAEQTNLLALNATIEAARAGEAGRGFAVVAHEVKALAGQTAKATEEISENVGLIQ
HHHHHHHHHHCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEE
ASTKTAVDAVREIGQAVRGINEITTNISNAIQQQDQATREISANAQSTAHGNQTLVQNIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SLRDAIGETSTAAASVLSASGDLNSTAQTLAHEVEKFFRNLRSGPAAEARLRKAS
HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]