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The map label for this gene is chrR [H]

Identifier: 146339618

GI number: 146339618

Start: 2800019

End: 2800669

Strand: Reverse

Name: chrR [H]

Synonym: BRADO2611

Alternate gene names: 146339618

Gene position: 2800669-2800019 (Counterclockwise)

Preceding gene: 146339619

Following gene: 146339617

Centisome position: 37.56

GC content: 66.36

Gene sequence:

>651_bases
ATGACGATTAGCCACCACCCGCCGGAAGACCTGCTGGCCGACTTCGCCACTGGTACGCTCGACGAGGCCGAGCGGCTCGT
CGTCGGTGTCCACGTTGCCGGCTGCCCCCGCTGCCGGCGCTTCGTTCGCGCCATCGAGCAGCTCGCGGGCGCCGCATTCG
AGGCGGCCGAGCCTGTTGCGATGGAGACTAACGCGTTCGATGCCTTGATGACGAGGATCAACCGCCGCCCCCAGCCCGCA
CCGCAGGTCCGTGAAGTTGCCGAGATCGACCCGGAGTTCGCCGACCTGCCTGAGATGGTGAAGCGGTTCAAGATCGGCAA
GCGCCGCCGCGTCGCACCGGGTATCAGCATGCGTCCGATCATGCTGTCCGGCACCGGCAAGTCGCGAGCGTTCCTGTTGC
GCTCCGAACCCGGCGCGAGGATGCTCGAGCATACCCATTCCGGCAACGAGCTGACCTGTGTGCTGAAGGGCAGCTTCAGC
CATCTCGGCGGCTATTACGGCCCCGGTGACTTCGACTACGGCGACGACGAGGTCGATCACCGTCCCGTGGTCGGCGACGA
AGGCCCGTGCCTGTGCCTTGTGGCGATGACGGGCGACCTGAAGATGCACGGCCTGCTCGGCCGCATGATCAGTCCTTTCG
TCCGGCTCTGA

Upstream 100 bases:

>100_bases
ATTCGGAAATCGCGGCGGTGCTCGGACTGCCGCTCGGTACGGTAAAGTCACGAATCAGACTGGCGATGAATCGCCTGAGG
GACCTGTTGGACGACGCGAC

Downstream 100 bases:

>100_bases
ACCTCCCCACGCGGATGGCGCGAGGCCCGCGAGATCTTCCAGGTGCTGCGCGCCTGGACGATCAGCCAGTTGCGTCCCTC
GTGTGACGGCCGCAGTCTGG

Product: putative transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTISHHPPEDLLADFATGTLDEAERLVVGVHVAGCPRCRRFVRAIEQLAGAAFEAAEPVAMETNAFDALMTRINRRPQPA
PQVREVAEIDPEFADLPEMVKRFKIGKRRRVAPGISMRPIMLSGTGKSRAFLLRSEPGARMLEHTHSGNELTCVLKGSFS
HLGGYYGPGDFDYGDDEVDHRPVVGDEGPCLCLVAMTGDLKMHGLLGRMISPFVRL

Sequences:

>Translated_216_residues
MTISHHPPEDLLADFATGTLDEAERLVVGVHVAGCPRCRRFVRAIEQLAGAAFEAAEPVAMETNAFDALMTRINRRPQPA
PQVREVAEIDPEFADLPEMVKRFKIGKRRRVAPGISMRPIMLSGTGKSRAFLLRSEPGARMLEHTHSGNELTCVLKGSFS
HLGGYYGPGDFDYGDDEVDHRPVVGDEGPCLCLVAMTGDLKMHGLLGRMISPFVRL
>Mature_215_residues
TISHHPPEDLLADFATGTLDEAERLVVGVHVAGCPRCRRFVRAIEQLAGAAFEAAEPVAMETNAFDALMTRINRRPQPAP
QVREVAEIDPEFADLPEMVKRFKIGKRRRVAPGISMRPIMLSGTGKSRAFLLRSEPGARMLEHTHSGNELTCVLKGSFSH
LGGYYGPGDFDYGDDEVDHRPVVGDEGPCLCLVAMTGDLKMHGLLGRMISPFVRL

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23708; Mature: 23576

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISHHPPEDLLADFATGTLDEAERLVVGVHVAGCPRCRRFVRAIEQLAGAAFEAAEPVA
CCCCCCCCHHHHHHHHCCCHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCE
METNAFDALMTRINRRPQPAPQVREVAEIDPEFADLPEMVKRFKIGKRRRVAPGISMRPI
ECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCE
MLSGTGKSRAFLLRSEPGARMLEHTHSGNELTCVLKGSFSHLGGYYGPGDFDYGDDEVDH
EEECCCCCEEEEEECCCCHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCC
RPVVGDEGPCLCLVAMTGDLKMHGLLGRMISPFVRL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TISHHPPEDLLADFATGTLDEAERLVVGVHVAGCPRCRRFVRAIEQLAGAAFEAAEPVA
CCCCCCCHHHHHHHHCCCHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCE
METNAFDALMTRINRRPQPAPQVREVAEIDPEFADLPEMVKRFKIGKRRRVAPGISMRPI
ECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCE
MLSGTGKSRAFLLRSEPGARMLEHTHSGNELTCVLKGSFSHLGGYYGPGDFDYGDDEVDH
EEECCCCCEEEEEECCCCHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCC
RPVVGDEGPCLCLVAMTGDLKMHGLLGRMISPFVRL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]