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The map label for this gene is 146339616

Identifier: 146339616

GI number: 146339616

Start: 2797718

End: 2799244

Strand: Reverse

Name: 146339616

Synonym: BRADO2608

Alternate gene names: NA

Gene position: 2799244-2797718 (Counterclockwise)

Preceding gene: 146339617

Following gene: 146339615

Centisome position: 37.54

GC content: 65.16

Gene sequence:

>1527_bases
ATGACGAAAGCAAAGGCCGTCAGACATCTCGTCGTCGTGCTGGGCGACCAGCTCGATGCCGATTCGGCTGCGTTCGACGG
TTTCGATCGCGAGCAGGACGTCGTGCTGCAGATGGAGGTCGACGACGAGGCGACCTACGTTCCGCAGCACAAGATGCGGA
TCGCCTTTTTCTTCGCGGCGATGCGGCACTTCCACGCCGATCTCGAATCCCGCGGCCGAACCGTGCGTTACGTGCGGCTC
GACGATCCTGCCAACACCGGCGCGCTCGACAGCGAGATCGCGCGCCACCAGGCCGCGCTGCAGCCGCAGGCTACGATCGT
GCTGGAGCCCGGCGACTTCCGCGTCCGCGAGAGCCTGCGCAAGCTGCCGCAGCGGCCGGAGATCCGGCTCGACCGCCACT
TTCTATGCACGGCTGACGAGTTCGACGCCTTCACCGACCGCCATCCGCGACCGATCATGGAGACGTTCTATCGCGCGATG
CGGCGCAAGACCGGGCTGCTGCTCGACGAGAGCGGGCGCCCGATCGGCGGCAGCTGGAATTTCGATGCCGAGAACCGCAA
GGGGTTCGGCAAGTCTCGCCCTCCGATTCCCGTGCCGCGCTCCTATGCGCCCGACGCGATCACGCAAGATGTGCTCAAGC
TGGTCGCGGCGCGCTTTTCCAACAGTCCGGGCAAGCTCGAGCGCTTCGACCTGCCGGTGTCGCGCGTCGATGCGCTGACC
GAGCTGTCCGATTTCGTCAGCTGGCGTCTGTCGCTGTTCGGCACCTATCAGGACGCAATGCTGACCGGCGAGCCGTTCCT
GTATCACTCGCGGCTGTCCGGCGCGCTCAATCTGCACATGCTCAATCCGCGCGAGGTGGTCGCTGCGGCGCTGGAGAGCC
GCAACGCTCCGCTGAACGCGCTCGAGGGCTTCGTGCGCCAGATCATCGGTTGGCGCGAATTCGTGCGCGGCATCTACTGG
CAGCGCATGCCGCACTATGCCGACGAGAACGCGCTCGACGCCAATCTGCCGATGCCACGCTTCTACTGGACGGGCGAGAC
CGATATGCGCTGCCTGTCGCAGGCGATCGGCCACACCATCGATCATGCCTATGCCCATCACATCGAGCGGCTGATGGTTC
TCGGCCTGTTCGCGATGCTGCTCGGCGTGAAGCCGCACGACGTGCATCTATGGCACATGTCGATGTTCCACGACGCGATC
GACTGGGTGTCGCTGCCGAACACGCTCGGCATGAGCCAGCACGGGGATGGCGGCGTGGTCGGCACCAAGCCCTATGCGGC
CTCGGGCCACTATATCGATCGCATGAGCGATCATTGCCGCCACTGCCGCTACGATCCGAAGCAGGCGACCGGCGACAAGG
CCTGTCCGTTTACGACGCTCTATTGGAGCTTCCTCGCCAAGCACCGCCGCCGCTTCGCCAACAACGGCCGGATGCGCAAC
CAGTATGTAAACCTTGAGCGGCGCAGCGCCGCCGAGATCCGCGCCATCCGCAGCCACGCGGACACGATCACTGCGTCCAT
GGTCTAG

Upstream 100 bases:

>100_bases
AAGACCTGGCTGCATCGCAGCCTCGTCGCGGTACGCAAGGAATGCCTCGGCCGCGTCGGAGCCATGACCGCGGCGGCGGC
CTGATTTGCAGCGGGACATG

Downstream 100 bases:

>100_bases
CCCGCCCGCTTGATGGCCGGGCGCCGATCGGTCATACCTTCGGGCAGCCGTTTGCCCCGCCGAGATCCATGACCGGATAC
CTCCCGCAATGACCACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MTKAKAVRHLVVVLGDQLDADSAAFDGFDREQDVVLQMEVDDEATYVPQHKMRIAFFFAAMRHFHADLESRGRTVRYVRL
DDPANTGALDSEIARHQAALQPQATIVLEPGDFRVRESLRKLPQRPEIRLDRHFLCTADEFDAFTDRHPRPIMETFYRAM
RRKTGLLLDESGRPIGGSWNFDAENRKGFGKSRPPIPVPRSYAPDAITQDVLKLVAARFSNSPGKLERFDLPVSRVDALT
ELSDFVSWRLSLFGTYQDAMLTGEPFLYHSRLSGALNLHMLNPREVVAAALESRNAPLNALEGFVRQIIGWREFVRGIYW
QRMPHYADENALDANLPMPRFYWTGETDMRCLSQAIGHTIDHAYAHHIERLMVLGLFAMLLGVKPHDVHLWHMSMFHDAI
DWVSLPNTLGMSQHGDGGVVGTKPYAASGHYIDRMSDHCRHCRYDPKQATGDKACPFTTLYWSFLAKHRRRFANNGRMRN
QYVNLERRSAAEIRAIRSHADTITASMV

Sequences:

>Translated_508_residues
MTKAKAVRHLVVVLGDQLDADSAAFDGFDREQDVVLQMEVDDEATYVPQHKMRIAFFFAAMRHFHADLESRGRTVRYVRL
DDPANTGALDSEIARHQAALQPQATIVLEPGDFRVRESLRKLPQRPEIRLDRHFLCTADEFDAFTDRHPRPIMETFYRAM
RRKTGLLLDESGRPIGGSWNFDAENRKGFGKSRPPIPVPRSYAPDAITQDVLKLVAARFSNSPGKLERFDLPVSRVDALT
ELSDFVSWRLSLFGTYQDAMLTGEPFLYHSRLSGALNLHMLNPREVVAAALESRNAPLNALEGFVRQIIGWREFVRGIYW
QRMPHYADENALDANLPMPRFYWTGETDMRCLSQAIGHTIDHAYAHHIERLMVLGLFAMLLGVKPHDVHLWHMSMFHDAI
DWVSLPNTLGMSQHGDGGVVGTKPYAASGHYIDRMSDHCRHCRYDPKQATGDKACPFTTLYWSFLAKHRRRFANNGRMRN
QYVNLERRSAAEIRAIRSHADTITASMV
>Mature_507_residues
TKAKAVRHLVVVLGDQLDADSAAFDGFDREQDVVLQMEVDDEATYVPQHKMRIAFFFAAMRHFHADLESRGRTVRYVRLD
DPANTGALDSEIARHQAALQPQATIVLEPGDFRVRESLRKLPQRPEIRLDRHFLCTADEFDAFTDRHPRPIMETFYRAMR
RKTGLLLDESGRPIGGSWNFDAENRKGFGKSRPPIPVPRSYAPDAITQDVLKLVAARFSNSPGKLERFDLPVSRVDALTE
LSDFVSWRLSLFGTYQDAMLTGEPFLYHSRLSGALNLHMLNPREVVAAALESRNAPLNALEGFVRQIIGWREFVRGIYWQ
RMPHYADENALDANLPMPRFYWTGETDMRCLSQAIGHTIDHAYAHHIERLMVLGLFAMLLGVKPHDVHLWHMSMFHDAID
WVSLPNTLGMSQHGDGGVVGTKPYAASGHYIDRMSDHCRHCRYDPKQATGDKACPFTTLYWSFLAKHRRRFANNGRMRNQ
YVNLERRSAAEIRAIRSHADTITASMV

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57998; Mature: 57867

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAKAVRHLVVVLGDQLDADSAAFDGFDREQDVVLQMEVDDEATYVPQHKMRIAFFFAA
CCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
MRHFHADLESRGRTVRYVRLDDPANTGALDSEIARHQAALQPQATIVLEPGDFRVRESLR
HHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
KLPQRPEIRLDRHFLCTADEFDAFTDRHPRPIMETFYRAMRRKTGLLLDESGRPIGGSWN
HCCCCCCCEECCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
FDAENRKGFGKSRPPIPVPRSYAPDAITQDVLKLVAARFSNSPGKLERFDLPVSRVDALT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH
ELSDFVSWRLSLFGTYQDAMLTGEPFLYHSRLSGALNLHMLNPREVVAAALESRNAPLNA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCEEEEEEECHHHHHHHHHHHCCCCHHH
LEGFVRQIIGWREFVRGIYWQRMPHYADENALDANLPMPRFYWTGETDMRCLSQAIGHTI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
DHAYAHHIERLMVLGLFAMLLGVKPHDVHLWHMSMFHDAIDWVSLPNTLGMSQHGDGGVV
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GTKPYAASGHYIDRMSDHCRHCRYDPKQATGDKACPFTTLYWSFLAKHRRRFANNGRMRN
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
QYVNLERRSAAEIRAIRSHADTITASMV
HHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKAKAVRHLVVVLGDQLDADSAAFDGFDREQDVVLQMEVDDEATYVPQHKMRIAFFFAA
CHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
MRHFHADLESRGRTVRYVRLDDPANTGALDSEIARHQAALQPQATIVLEPGDFRVRESLR
HHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
KLPQRPEIRLDRHFLCTADEFDAFTDRHPRPIMETFYRAMRRKTGLLLDESGRPIGGSWN
HCCCCCCCEECCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
FDAENRKGFGKSRPPIPVPRSYAPDAITQDVLKLVAARFSNSPGKLERFDLPVSRVDALT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH
ELSDFVSWRLSLFGTYQDAMLTGEPFLYHSRLSGALNLHMLNPREVVAAALESRNAPLNA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCEEEEEEECHHHHHHHHHHHCCCCHHH
LEGFVRQIIGWREFVRGIYWQRMPHYADENALDANLPMPRFYWTGETDMRCLSQAIGHTI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHH
DHAYAHHIERLMVLGLFAMLLGVKPHDVHLWHMSMFHDAIDWVSLPNTLGMSQHGDGGVV
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GTKPYAASGHYIDRMSDHCRHCRYDPKQATGDKACPFTTLYWSFLAKHRRRFANNGRMRN
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
QYVNLERRSAAEIRAIRSHADTITASMV
HHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA