Click here to switch to the map view.

The map label for this gene is ygbL [C]

Identifier: 146339559

GI number: 146339559

Start: 2723740

End: 2724402

Strand: Reverse

Name: ygbL [C]

Synonym: BRADO2550

Alternate gene names: 146339559

Gene position: 2724402-2723740 (Counterclockwise)

Preceding gene: 146339574

Following gene: 146339558

Centisome position: 36.54

GC content: 66.82

Gene sequence:

>663_bases
GTGGCGGACACTGCAATTCGCGAGGCCATCTGCCGGTTCGGGCGCTCGCTGTTCGAGCGCGGGCTGACGCCGGGCTCGTC
CGGCAACATCAGCGTGCGGCTGGACGACGGCGGCTGGCTGGTCACGCCGACCAATGCCTCGCTCGGCTTCCTCGATCCGG
CCCGGCTGTCGCGGCTCGATGCGACCGGCAGGCTGGTCTCAGGCGACGCGCCGACCAAGGAGGTGCCGCTGCATACGGCG
CTCTACCAGACGCGCGACGCCGCGCGCGCCGTGGTGCATCTGCACTCGACGCATTCGGTCGCGATCTCGATGCTTCCGGA
GATCGATCCGCGTGCCGCGCTGCCGCCGCTGACGCCTTATTATTTGATGCGTTGCGGTCAGACCGCTCTGGTGCCCTATC
ACCGTCCTGGCGATCCCGCAGTTGCCGACGCCATCAAGGGTCTCGCCGGCCAATACGCCTCGGTCCTGCTCGCCAATCAC
GGTCCGGTCGTGTCCGGCGACACGCTGGAGGCCGCGGTGTTCGCGATGGAGGAACTGGAGGAGACGGCCAAACTCTATCT
GCTGCTGCGCGGGCTCAATCCCCGCCATCTGTCGCCGCAGCAGGTTGACGATCTCGTCAAGGTGTTCGGGCTCATTTTGC
CCGATCACGCCGATCATCATTGA

Upstream 100 bases:

>100_bases
TGTCCGGTTAACCCGGCTCGTCCCTGGGTAACACGGCTTGGCCGCGCTGCCAAAGCGTGAGACAAAGCTCGTCACGCGCG
ACCCCTCGAGGATGAACACC

Downstream 100 bases:

>100_bases
TCGAATCGACGGTCGACGCGCATGCAGTACCCTGCACCCTCGCCGGCCGAGATCGAAGCCGCCGCTCGCGTGCTGTTCGA
GGAGGCGCGCTTTTATCGCT

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MADTAIREAICRFGRSLFERGLTPGSSGNISVRLDDGGWLVTPTNASLGFLDPARLSRLDATGRLVSGDAPTKEVPLHTA
LYQTRDAARAVVHLHSTHSVAISMLPEIDPRAALPPLTPYYLMRCGQTALVPYHRPGDPAVADAIKGLAGQYASVLLANH
GPVVSGDTLEAAVFAMEELEETAKLYLLLRGLNPRHLSPQQVDDLVKVFGLILPDHADHH

Sequences:

>Translated_220_residues
MADTAIREAICRFGRSLFERGLTPGSSGNISVRLDDGGWLVTPTNASLGFLDPARLSRLDATGRLVSGDAPTKEVPLHTA
LYQTRDAARAVVHLHSTHSVAISMLPEIDPRAALPPLTPYYLMRCGQTALVPYHRPGDPAVADAIKGLAGQYASVLLANH
GPVVSGDTLEAAVFAMEELEETAKLYLLLRGLNPRHLSPQQVDDLVKVFGLILPDHADHH
>Mature_219_residues
ADTAIREAICRFGRSLFERGLTPGSSGNISVRLDDGGWLVTPTNASLGFLDPARLSRLDATGRLVSGDAPTKEVPLHTAL
YQTRDAARAVVHLHSTHSVAISMLPEIDPRAALPPLTPYYLMRCGQTALVPYHRPGDPAVADAIKGLAGQYASVLLANHG
PVVSGDTLEAAVFAMEELEETAKLYLLLRGLNPRHLSPQQVDDLVKVFGLILPDHADHH

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=203, Percent_Identity=47.7832512315271, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1789164, Length=169, Percent_Identity=31.9526627218935, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23664; Mature: 23533

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTAIREAICRFGRSLFERGLTPGSSGNISVRLDDGGWLVTPTNASLGFLDPARLSRLD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHC
ATGRLVSGDAPTKEVPLHTALYQTRDAARAVVHLHSTHSVAISMLPEIDPRAALPPLTPY
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHH
YLMRCGQTALVPYHRPGDPAVADAIKGLAGQYASVLLANHGPVVSGDTLEAAVFAMEELE
HHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH
ETAKLYLLLRGLNPRHLSPQQVDDLVKVFGLILPDHADHH
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ADTAIREAICRFGRSLFERGLTPGSSGNISVRLDDGGWLVTPTNASLGFLDPARLSRLD
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHC
ATGRLVSGDAPTKEVPLHTALYQTRDAARAVVHLHSTHSVAISMLPEIDPRAALPPLTPY
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHH
YLMRCGQTALVPYHRPGDPAVADAIKGLAGQYASVLLANHGPVVSGDTLEAAVFAMEELE
HHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH
ETAKLYLLLRGLNPRHLSPQQVDDLVKVFGLILPDHADHH
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]