Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is yuiH [H]

Identifier: 146339539

GI number: 146339539

Start: 2702716

End: 2703378

Strand: Reverse

Name: yuiH [H]

Synonym: BRADO2530

Alternate gene names: 146339539

Gene position: 2703378-2702716 (Counterclockwise)

Preceding gene: 146339540

Following gene: 146339538

Centisome position: 36.25

GC content: 65.91

Gene sequence:

>663_bases
ATGGCAGACGAGTCCGGGCTGCCGCCCGAGAGCAAGCTGACCCGCAGCAAGGAACGCTGGGCGCGCGAGGGCAAATTCCT
CACCGGCCGCATCGTTCGGCCGGAGGACGAGCGGCTGCCGCCGGGCCAACACCTGACCCGCGACTGGCCGGTGCTCGACC
TCGGCCTGACGCCGTCGGTCACATCAGAGCGCTGGCGGCTCGACGTCTATGGCGCGGTCGAAAATCCGCTGTTCTGGGAC
ATGTCGGCCTTTCTCGCCCAGGAGCAGCGCCAGTTCGTCTCCGACATCCATTGCGTCACGACCTGGTCGCGCTACGACAA
TCAATGGGAGGGGCTCGCGACACGCGACCTGCTCGCCGCCTGCCGCCCGCGCGAAACAGCCAATTTCGTCGTGCTGCATT
CCTATGACGGCTACACCACCAATCTCGCGCTGGAGGATTTCGCCGCCGAGGATGCGCTGCTCGCGCACAGCTGGTCCGGC
GCACCGCTCTCCCTCGAGCATGGCGGCCCGGTGCGCGTCGTGGTGCCGCATCTGTATTTCTGGAAGAGCGCGAAATGGCT
CAAGGCCATCGAGTTTCTCGATGCCGACAAGCCCGGCTATTGGGAAGTCCGCGGCTATCACAACCGCGGCGATCCCTGGG
CCGAACAGCGCTATTCGGAGTGA

Upstream 100 bases:

>100_bases
TCTTCCTCTCGCTGCTCATCTATGCGACCATGCGCGACACCAAGCATGCGTCCGCCATGCACAGGCATGAGTGAGCCGCT
CAAATCGACGGGGTGCCGAG

Downstream 100 bases:

>100_bases
CGGGTTAACCGACTTGTAGGGTGGGCAAAGACGCGCAGCGTCGTGCCCACCGTCTTTCCCCGAAAAGAAAAGAACGGTGG
GCACGCTTCGCTTTGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSVTSERWRLDVYGAVENPLFWD
MSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAACRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSG
APLSLEHGGPVRVVVPHLYFWKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE

Sequences:

>Translated_220_residues
MADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSVTSERWRLDVYGAVENPLFWD
MSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAACRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSG
APLSLEHGGPVRVVVPHLYFWKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE
>Mature_219_residues
ADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSVTSERWRLDVYGAVENPLFWDM
SAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAACRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSGA
PLSLEHGGPVRVVVPHLYFWKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE

Specific function: Unknown

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Transmembrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 25360; Mature: 25228

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSV
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCC
TSERWRLDVYGAVENPLFWDMSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAA
CCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHH
CRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSGAPLSLEHGGPVRVVVPHLYF
CCCCCCCCEEEEECCCCEEEEEEHHHHCCCCHHEEECCCCCCEEECCCCCEEEEECCCEE
WKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE
CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCC
>Mature Secondary Structure 
ADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSV
CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCC
TSERWRLDVYGAVENPLFWDMSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAA
CCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHH
CRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSGAPLSLEHGGPVRVVVPHLYF
CCCCCCCCEEEEECCCCEEEEEEHHHHCCCCHHEEECCCCCCEEECCCCCEEEEECCCEE
WKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE
CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]