| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yuiH [H]
Identifier: 146339539
GI number: 146339539
Start: 2702716
End: 2703378
Strand: Reverse
Name: yuiH [H]
Synonym: BRADO2530
Alternate gene names: 146339539
Gene position: 2703378-2702716 (Counterclockwise)
Preceding gene: 146339540
Following gene: 146339538
Centisome position: 36.25
GC content: 65.91
Gene sequence:
>663_bases ATGGCAGACGAGTCCGGGCTGCCGCCCGAGAGCAAGCTGACCCGCAGCAAGGAACGCTGGGCGCGCGAGGGCAAATTCCT CACCGGCCGCATCGTTCGGCCGGAGGACGAGCGGCTGCCGCCGGGCCAACACCTGACCCGCGACTGGCCGGTGCTCGACC TCGGCCTGACGCCGTCGGTCACATCAGAGCGCTGGCGGCTCGACGTCTATGGCGCGGTCGAAAATCCGCTGTTCTGGGAC ATGTCGGCCTTTCTCGCCCAGGAGCAGCGCCAGTTCGTCTCCGACATCCATTGCGTCACGACCTGGTCGCGCTACGACAA TCAATGGGAGGGGCTCGCGACACGCGACCTGCTCGCCGCCTGCCGCCCGCGCGAAACAGCCAATTTCGTCGTGCTGCATT CCTATGACGGCTACACCACCAATCTCGCGCTGGAGGATTTCGCCGCCGAGGATGCGCTGCTCGCGCACAGCTGGTCCGGC GCACCGCTCTCCCTCGAGCATGGCGGCCCGGTGCGCGTCGTGGTGCCGCATCTGTATTTCTGGAAGAGCGCGAAATGGCT CAAGGCCATCGAGTTTCTCGATGCCGACAAGCCCGGCTATTGGGAAGTCCGCGGCTATCACAACCGCGGCGATCCCTGGG CCGAACAGCGCTATTCGGAGTGA
Upstream 100 bases:
>100_bases TCTTCCTCTCGCTGCTCATCTATGCGACCATGCGCGACACCAAGCATGCGTCCGCCATGCACAGGCATGAGTGAGCCGCT CAAATCGACGGGGTGCCGAG
Downstream 100 bases:
>100_bases CGGGTTAACCGACTTGTAGGGTGGGCAAAGACGCGCAGCGTCGTGCCCACCGTCTTTCCCCGAAAAGAAAAGAACGGTGG GCACGCTTCGCTTTGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSVTSERWRLDVYGAVENPLFWD MSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAACRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSG APLSLEHGGPVRVVVPHLYFWKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE
Sequences:
>Translated_220_residues MADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSVTSERWRLDVYGAVENPLFWD MSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAACRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSG APLSLEHGGPVRVVVPHLYFWKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE >Mature_219_residues ADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSVTSERWRLDVYGAVENPLFWDM SAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAACRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSGA PLSLEHGGPVRVVVPHLYFWKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 25360; Mature: 25228
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSV CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCC TSERWRLDVYGAVENPLFWDMSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAA CCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHH CRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSGAPLSLEHGGPVRVVVPHLYF CCCCCCCCEEEEECCCCEEEEEEHHHHCCCCHHEEECCCCCCEEECCCCCEEEEECCCEE WKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCC >Mature Secondary Structure ADESGLPPESKLTRSKERWAREGKFLTGRIVRPEDERLPPGQHLTRDWPVLDLGLTPSV CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCC TSERWRLDVYGAVENPLFWDMSAFLAQEQRQFVSDIHCVTTWSRYDNQWEGLATRDLLAA CCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHH CRPRETANFVVLHSYDGYTTNLALEDFAAEDALLAHSWSGAPLSLEHGGPVRVVVPHLYF CCCCCCCCEEEEECCCCEEEEEEHHHHCCCCHHEEECCCCCCEEECCCCCEEEEECCCEE WKSAKWLKAIEFLDADKPGYWEVRGYHNRGDPWAEQRYSE CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]