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The map label for this gene is ycjC [C]

Identifier: 146339431

GI number: 146339431

Start: 2574362

End: 2574841

Strand: Reverse

Name: ycjC [C]

Synonym: BRADO2417

Alternate gene names: 146339431

Gene position: 2574841-2574362 (Counterclockwise)

Preceding gene: 146339433

Following gene: 146339429

Centisome position: 34.53

GC content: 62.71

Gene sequence:

>480_bases
ATGAACCGACAGCCGATCATCCGAAGCCCCGGCGAAGGCAAATTCGTCAAACTCGCCGGCCAGCCCATGGGATTTCTGGT
CACCGGCAAAGATACCCGGCACACGTCGATGTTCGAGTGGACAATCCCGCCCGGCTTCTCTACCGGCCTGCATGTTCACC
GGGTGCAGGAAGAAACTTTTTACGTGCTGGAGGGCGAGTGCGACTGGCAGGTCGGCGACAAACGCGTGCGAGCGACCCCT
GGCACCTATCTCTTCTTACCGCCGGGCGTGCCGCACAATATCGCCAACGCGTCCGACGCAATCGCCCGCGTGCTCATGAC
CGTGTCGCCGCCCGGACACGAGCGCTATTTTGAGGAGCTCTCCGAGACAGTGGCGCGGGGCGGGGCCGATGCAGCGACGA
TCGCGGAGTTGCGGGCTCGCTATGATACGGATCAGCTATCGGCACTCGAAAGCAAGGCGCTTTCCAAGCCCACGGCCTGA

Upstream 100 bases:

>100_bases
CATTTTGGCGACATTTTGTAACAATTTCGGAGATGCTTCACGACCTTGGGATGATCTACCGGCAGATTCAAGCTCCCTGA
ACACCCATTGGAGAGCCATC

Downstream 100 bases:

>100_bases
GCATGCAATTCTGTCGGCTCCCGAATTGTCTCGTTCGGGTCACGAGCAGACATGCTGCGGATTGCACCACCCTCCTCTGT
CACCCCCCCGGGCCGTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel Domain-Containing Protein; Cupin 2 Conserved Barre; Cupin Domain-Containing Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNRQPIIRSPGEGKFVKLAGQPMGFLVTGKDTRHTSMFEWTIPPGFSTGLHVHRVQEETFYVLEGECDWQVGDKRVRATP
GTYLFLPPGVPHNIANASDAIARVLMTVSPPGHERYFEELSETVARGGADAATIAELRARYDTDQLSALESKALSKPTA

Sequences:

>Translated_159_residues
MNRQPIIRSPGEGKFVKLAGQPMGFLVTGKDTRHTSMFEWTIPPGFSTGLHVHRVQEETFYVLEGECDWQVGDKRVRATP
GTYLFLPPGVPHNIANASDAIARVLMTVSPPGHERYFEELSETVARGGADAATIAELRARYDTDQLSALESKALSKPTA
>Mature_159_residues
MNRQPIIRSPGEGKFVKLAGQPMGFLVTGKDTRHTSMFEWTIPPGFSTGLHVHRVQEETFYVLEGECDWQVGDKRVRATP
GTYLFLPPGVPHNIANASDAIARVLMTVSPPGHERYFEELSETVARGGADAATIAELRARYDTDQLSALESKALSKPTA

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17468; Mature: 17468

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQPIIRSPGEGKFVKLAGQPMGFLVTGKDTRHTSMFEWTIPPGFSTGLHVHRVQEETF
CCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCEE
YVLEGECDWQVGDKRVRATPGTYLFLPPGVPHNIANASDAIARVLMTVSPPGHERYFEEL
EEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
SETVARGGADAATIAELRARYDTDQLSALESKALSKPTA
HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRQPIIRSPGEGKFVKLAGQPMGFLVTGKDTRHTSMFEWTIPPGFSTGLHVHRVQEETF
CCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCEE
YVLEGECDWQVGDKRVRATPGTYLFLPPGVPHNIANASDAIARVLMTVSPPGHERYFEEL
EEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
SETVARGGADAATIAELRARYDTDQLSALESKALSKPTA
HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA