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The map label for this gene is yhiU [C]

Identifier: 146339399

GI number: 146339399

Start: 2538973

End: 2540055

Strand: Reverse

Name: yhiU [C]

Synonym: BRADO2384

Alternate gene names: 146339399

Gene position: 2540055-2538973 (Counterclockwise)

Preceding gene: 146339400

Following gene: 146339398

Centisome position: 34.06

GC content: 64.73

Gene sequence:

>1083_bases
ATGGCCGTTCTGTTCGGCGGCCTCTACGGTTTCCAGACGTTCAAGGGCATCATGATCGCCAAGGCGATCGGCGCCATGGC
CAACCCGCCGCAGACGATCTCGACCGCGACGGCAGCGACTGCGCCGTGGCGCTCGAAACTCACCGCCGTCGGCTCGCTGC
GTGCCGTCAACGGCGCCGACCTGGCGCTGCAGGCGTCGGGCATCGTGCAGAGCATCCAGTTCAATTCCGGCGATGCCGTC
GAAGCCGGCCAGCCGCTGCTGCAGCTCGTCGCCACCGACGACGTCGCCAAGCTGCAGTCGCTGCAGGCCACCGCGGAGAA
CTACGCCATCGTCGTCAAGCGCGACGAGGAGCAGATCAAGTTCAACGCGGTCAGCCAGGCGACGCTGGACACCGACCGCG
CCAACCTGAAGAACGCGCAGGCGCTCGTCATGCAGCAGAAGGCAATCGTCGAGCAGAAGGCATTGAAGGCGCCGTTTGCC
GGCCGCCTCGGCATCCGCGCCGTCGATCTCGGCCAGTATCTCGGCGCCGGCACCACGATCGTGACCTTGCAGAGCCTCGA
TCCGATCTTCGTCGACTTCTATCTGCCGCAGCAGTCACTCGCCGACATCAGGATCGGCCAGGACGTCGGCATCTCAGTTG
ATGCCTTTCCCGGCGAGCGCTTCACCGGGCAGATCTCCGCGATCAACGCCAAAGTGGATTCTACCAGCCGCAACGTCCAG
GTCCGCGCCACCCTGCACAATGCCAGCGCGCGCCTGCTGCCGGGTATGTTCGCCAAGGTCGAGATCGGCATCGGCCAGCC
GGAGCAGCTCGTCACCCTGCCGCTCACCGCCGTCGTCAGCAATCCCTATGGCGATCTCGTCTACGTCGTCGATGATCTCA
AAAACGGACAAGGCAAGGCGCGGCAGATGTTCATCAAGAGCAAGCCGGCCAAGGGCGATCGCGTCGCCATCACCGAGGGC
GTCAAGCCGGGCGAGACCGTGGTGATCGCCGGACAGATCAAGCTGCGCAATGGCAGTCCCGTGAAGATCGATAACTCGCA
CGTGCCCGCGGCGGAAGCTGCGCCAAACGTCGTCGATCAGTAA

Upstream 100 bases:

>100_bases
CGGCGATGCCGCGCGCCAACCCCGGCTATTTCGCCGGCCCTACTCGCACGATCCAGGAAGCAATGTAATGAAGAAGCGCA
TGGTCATCATGCTGGCCGCG

Downstream 100 bases:

>100_bases
CCGCGCAAGCCCCACGTTCAGAGCTACCCATGCGTTTCACAGACATCTTCATCCGCCGGCCGGTGCTGGCGCTCGTGGTC
AGCGCGCTGATCCTCGTGCT

Product: putative RND efflux membrane fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MAVLFGGLYGFQTFKGIMIAKAIGAMANPPQTISTATAATAPWRSKLTAVGSLRAVNGADLALQASGIVQSIQFNSGDAV
EAGQPLLQLVATDDVAKLQSLQATAENYAIVVKRDEEQIKFNAVSQATLDTDRANLKNAQALVMQQKAIVEQKALKAPFA
GRLGIRAVDLGQYLGAGTTIVTLQSLDPIFVDFYLPQQSLADIRIGQDVGISVDAFPGERFTGQISAINAKVDSTSRNVQ
VRATLHNASARLLPGMFAKVEIGIGQPEQLVTLPLTAVVSNPYGDLVYVVDDLKNGQGKARQMFIKSKPAKGDRVAITEG
VKPGETVVIAGQIKLRNGSPVKIDNSHVPAAEAAPNVVDQ

Sequences:

>Translated_360_residues
MAVLFGGLYGFQTFKGIMIAKAIGAMANPPQTISTATAATAPWRSKLTAVGSLRAVNGADLALQASGIVQSIQFNSGDAV
EAGQPLLQLVATDDVAKLQSLQATAENYAIVVKRDEEQIKFNAVSQATLDTDRANLKNAQALVMQQKAIVEQKALKAPFA
GRLGIRAVDLGQYLGAGTTIVTLQSLDPIFVDFYLPQQSLADIRIGQDVGISVDAFPGERFTGQISAINAKVDSTSRNVQ
VRATLHNASARLLPGMFAKVEIGIGQPEQLVTLPLTAVVSNPYGDLVYVVDDLKNGQGKARQMFIKSKPAKGDRVAITEG
VKPGETVVIAGQIKLRNGSPVKIDNSHVPAAEAAPNVVDQ
>Mature_359_residues
AVLFGGLYGFQTFKGIMIAKAIGAMANPPQTISTATAATAPWRSKLTAVGSLRAVNGADLALQASGIVQSIQFNSGDAVE
AGQPLLQLVATDDVAKLQSLQATAENYAIVVKRDEEQIKFNAVSQATLDTDRANLKNAQALVMQQKAIVEQKALKAPFAG
RLGIRAVDLGQYLGAGTTIVTLQSLDPIFVDFYLPQQSLADIRIGQDVGISVDAFPGERFTGQISAINAKVDSTSRNVQV
RATLHNASARLLPGMFAKVEIGIGQPEQLVTLPLTAVVSNPYGDLVYVVDDLKNGQGKARQMFIKSKPAKGDRVAITEGV
KPGETVVIAGQIKLRNGSPVKIDNSHVPAAEAAPNVVDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789929, Length=311, Percent_Identity=28.9389067524116, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1786668, Length=359, Percent_Identity=30.6406685236769, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789665, Length=349, Percent_Identity=30.6590257879656, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI87082036, Length=342, Percent_Identity=23.9766081871345, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37998; Mature: 37867

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLFGGLYGFQTFKGIMIAKAIGAMANPPQTISTATAATAPWRSKLTAVGSLRAVNGAD
CEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCEEEECCCC
LALQASGIVQSIQFNSGDAVEAGQPLLQLVATDDVAKLQSLQATAENYAIVVKRDEEQIK
EEEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCEE
FNAVSQATLDTDRANLKNAQALVMQQKAIVEQKALKAPFAGRLGIRAVDLGQYLGAGTTI
EEEEEHEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCEEE
VTLQSLDPIFVDFYLPQQSLADIRIGQDVGISVDAFPGERFTGQISAINAKVDSTSRNVQ
EEEECCCCEEEEEECCCHHHCCEEECCCCCEEEECCCCCCCEEEEEEEEEEECCCCCCEE
VRATLHNASARLLPGMFAKVEIGIGQPEQLVTLPLTAVVSNPYGDLVYVVDDLKNGQGKA
EEEEEECCCCHHCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCCCCHH
RQMFIKSKPAKGDRVAITEGVKPGETVVIAGQIKLRNGSPVKIDNSHVPAAEAAPNVVDQ
HEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEECCCCCCCHHCCCCCCCC
>Mature Secondary Structure 
AVLFGGLYGFQTFKGIMIAKAIGAMANPPQTISTATAATAPWRSKLTAVGSLRAVNGAD
EEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHCEEEECCCC
LALQASGIVQSIQFNSGDAVEAGQPLLQLVATDDVAKLQSLQATAENYAIVVKRDEEQIK
EEEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCEE
FNAVSQATLDTDRANLKNAQALVMQQKAIVEQKALKAPFAGRLGIRAVDLGQYLGAGTTI
EEEEEHEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCEEE
VTLQSLDPIFVDFYLPQQSLADIRIGQDVGISVDAFPGERFTGQISAINAKVDSTSRNVQ
EEEECCCCEEEEEECCCHHHCCEEECCCCCEEEECCCCCCCEEEEEEEEEEECCCCCCEE
VRATLHNASARLLPGMFAKVEIGIGQPEQLVTLPLTAVVSNPYGDLVYVVDDLKNGQGKA
EEEEEECCCCHHCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCCCCHH
RQMFIKSKPAKGDRVAITEGVKPGETVVIAGQIKLRNGSPVKIDNSHVPAAEAAPNVVDQ
HEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCEEECCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]