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The map label for this gene is tspO [H]

Identifier: 146339353

GI number: 146339353

Start: 2487152

End: 2487565

Strand: Direct

Name: tspO [H]

Synonym: BRADO2334

Alternate gene names: 146339353

Gene position: 2487152-2487565 (Clockwise)

Preceding gene: 146339350

Following gene: 146339354

Centisome position: 33.36

GC content: 63.29

Gene sequence:

>414_bases
GTGGTCGGAGGCGGCTGGATCATCGGCGCCTCCAACATGCCCGGCGCCTGGTACGGCTCGCTCAACAAGCCCTGGTTCAC
CCCGCCGGGCTGGCTGTTTCCGATCGCCTGGACGGTGATCTACATCCTGGTCGCGGTGGCCGGCTGGCGCACCTATGAGC
GGGTGGTCAGCGGCGCCGTGATGCAGGTGTGGTGGGGACAATTGGTGCTGAACTTCGCCTGGTCGCCGGTGTTCTTCACC
GCGCATCTGATGTGGCCCGCATTCGCGATCATCGCCAGCATGTTCGTGCTGATCGTGACCTTCATCGTCATGCAATGGCG
CGCGGACCGGATCGCGGCGCTGCTGTTCGTGCCCTATGCCTGCTGGGTCGCGTTCGCGTCGGTGCTGAATTTTTCGGTGA
ATGTGTTGAATTGA

Upstream 100 bases:

>100_bases
CCGCATGGCTGCCGGGCGCCGGCGGACAGCCCCCCCCGAAAATCACGCCGAGCGGAATATGAACCGATCCATCCTGCATC
TTCTCGTCCTCCTGGTCCTC

Downstream 100 bases:

>100_bases
GATGAGGGACCACCGGCAGCCGAGAATCGTAGGGTGGGCAAAGGCGCAACGCGCCGTGCCCACCGGCCGTCGGATTCGGA
GATCGATGGTGGGCACGCTT

Product: tryptophan-rich sensory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MVGGGWIIGASNMPGAWYGSLNKPWFTPPGWLFPIAWTVIYILVAVAGWRTYERVVSGAVMQVWWGQLVLNFAWSPVFFT
AHLMWPAFAIIASMFVLIVTFIVMQWRADRIAALLFVPYACWVAFASVLNFSVNVLN

Sequences:

>Translated_137_residues
MVGGGWIIGASNMPGAWYGSLNKPWFTPPGWLFPIAWTVIYILVAVAGWRTYERVVSGAVMQVWWGQLVLNFAWSPVFFT
AHLMWPAFAIIASMFVLIVTFIVMQWRADRIAALLFVPYACWVAFASVLNFSVNVLN
>Mature_137_residues
MVGGGWIIGASNMPGAWYGSLNKPWFTPPGWLFPIAWTVIYILVAVAGWRTYERVVSGAVMQVWWGQLVLNFAWSPVFFT
AHLMWPAFAIIASMFVLIVTFIVMQWRADRIAALLFVPYACWVAFASVLNFSVNVLN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

Organism=Drosophila melanogaster, GI19920472, Length=128, Percent_Identity=31.25, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 15449; Mature: 15449

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGGGWIIGASNMPGAWYGSLNKPWFTPPGWLFPIAWTVIYILVAVAGWRTYERVVSGAV
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
MQVWWGQLVLNFAWSPVFFTAHLMWPAFAIIASMFVLIVTFIVMQWRADRIAALLFVPYA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CWVAFASVLNFSVNVLN
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVGGGWIIGASNMPGAWYGSLNKPWFTPPGWLFPIAWTVIYILVAVAGWRTYERVVSGAV
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
MQVWWGQLVLNFAWSPVFFTAHLMWPAFAIIASMFVLIVTFIVMQWRADRIAALLFVPYA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CWVAFASVLNFSVNVLN
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2747617 [H]