BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is actIII [H]

Identifier: 146339339

GI number: 146339339

Start: 2472079

End: 2472840

Strand: Direct

Name: actIII [H]

Synonym: BRADO2320

Alternate gene names: 146339339

Gene position: 2472079-2472840 (Clockwise)

Preceding gene: 146339333

Following gene: 146339340

Centisome position: 33.15

GC content: 67.45

Gene sequence:

>762_bases
ATGTCCGGACTGCCTGCAGCAGCGCATGCGATAGTGACCGGCGGCGGCCGCGGCATCGGGCGCGAGATCGCGCAGTCCCT
GAAGCGCGGCGGCGCAACCGTTACGATTGTCGGGCGCAACCGCGCAACGCTTGGTGAGGCCATCGCGGCCGGATGTGCCG
ACCACGCCGCCGTTGCCGATGTCGCCGATCAGTCTGCGCTTGGCGAGGCGGTCGCCGCTGCGGCCGCGCGACAGCCGATC
ACGATCCTCGTCGCCAACGCCGGAAGCGCGGAGTCGGCGCCGTTCCTGAAATCGGACGCCGAACTGTTCCGTCGCATGAT
GGACGTCAACTTCATGGGCGTCGTGCATGCGGTGCAGGCCGTGTTGCCCGCGATGAAAGGCGGCCGCTACGGCCGCATCG
TTGCTGTCGCGTCGACGGCGGGCTTGAAGGGCTATCCCTATGTCAGCGCCTACACGGCCGCGAAACATGCGGTCGTCGGC
CTCACGCGATCGCTTGCCCTGGAGCTGGCCGCCACGAGCGTCACCGTCAACGCTGTGTGCCCTGGCTTCACTGGCACTGA
CCTCGTTGCCGACAGCGTCGACAACATCATGAAGAAGACCGGTCGCAGCCGCGAGCAGGCGATCGCCGAGCTTGCCAAGC
ACAATCCGCAGGGACGGCTGATCAAGCCTCAGGAGGTTGCCGATACCGTGCTGTGGCTGTGCGGTGAGGGGGCTGGCGCC
ATCACGGGGCAAGCGATCGCAGTGGCGGGCGGCGAAGTCTAG

Upstream 100 bases:

>100_bases
ACAAGAGTGTCAAGCCGCTTCGGCCGTGTTGTTGCAAAAATTTGAAGTTTAAAATAATCTCGAGCTGCGATCGTGTGGCA
AAAGGTGAGGAGACCCGCGC

Downstream 100 bases:

>100_bases
GCCGCGTCGTCCAATCAGAACAATCGAACCGAGGGAGCTCACATGTCCAAGCCCGCCAATCCCGTCACCGTGCCGTTGGC
TGACTACAAGCCCAGCCATT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSGLPAAAHAIVTGGGRGIGREIAQSLKRGGATVTIVGRNRATLGEAIAAGCADHAAVADVADQSALGEAVAAAAARQPI
TILVANAGSAESAPFLKSDAELFRRMMDVNFMGVVHAVQAVLPAMKGGRYGRIVAVASTAGLKGYPYVSAYTAAKHAVVG
LTRSLALELAATSVTVNAVCPGFTGTDLVADSVDNIMKKTGRSREQAIAELAKHNPQGRLIKPQEVADTVLWLCGEGAGA
ITGQAIAVAGGEV

Sequences:

>Translated_253_residues
MSGLPAAAHAIVTGGGRGIGREIAQSLKRGGATVTIVGRNRATLGEAIAAGCADHAAVADVADQSALGEAVAAAAARQPI
TILVANAGSAESAPFLKSDAELFRRMMDVNFMGVVHAVQAVLPAMKGGRYGRIVAVASTAGLKGYPYVSAYTAAKHAVVG
LTRSLALELAATSVTVNAVCPGFTGTDLVADSVDNIMKKTGRSREQAIAELAKHNPQGRLIKPQEVADTVLWLCGEGAGA
ITGQAIAVAGGEV
>Mature_252_residues
SGLPAAAHAIVTGGGRGIGREIAQSLKRGGATVTIVGRNRATLGEAIAAGCADHAAVADVADQSALGEAVAAAAARQPIT
ILVANAGSAESAPFLKSDAELFRRMMDVNFMGVVHAVQAVLPAMKGGRYGRIVAVASTAGLKGYPYVSAYTAAKHAVVGL
TRSLALELAATSVTVNAVCPGFTGTDLVADSVDNIMKKTGRSREQAIAELAKHNPQGRLIKPQEVADTVLWLCGEGAGAI
TGQAIAVAGGEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=31.0756972111554, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI4503817, Length=189, Percent_Identity=35.4497354497354, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=31.1538461538462, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI20149619, Length=197, Percent_Identity=31.4720812182741, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI210032110, Length=189, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI7705925, Length=252, Percent_Identity=29.7619047619048, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI32455239, Length=231, Percent_Identity=30.7359307359307, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI5031765, Length=231, Percent_Identity=30.7359307359307, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=29.1338582677165, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI7706318, Length=195, Percent_Identity=28.7179487179487, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=27.8884462151394, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI142976729, Length=190, Percent_Identity=29.4736842105263, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI40807363, Length=195, Percent_Identity=29.2307692307692, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI157739938, Length=183, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI210032112, Length=185, Percent_Identity=27.5675675675676, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI31542939, Length=190, Percent_Identity=32.6315789473684, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI119392083, Length=224, Percent_Identity=31.6964285714286, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI7657478, Length=188, Percent_Identity=31.3829787234043, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=31.2169312169312, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI7705855, Length=189, Percent_Identity=26.984126984127, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI226371731, Length=191, Percent_Identity=26.7015706806283, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI66933014, Length=224, Percent_Identity=24.1071428571429, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4758504, Length=195, Percent_Identity=30.7692307692308, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4504505, Length=244, Percent_Identity=28.6885245901639, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87082100, Length=247, Percent_Identity=33.6032388663968, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=32.8, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=32.2834645669291, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=29.3172690763052, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI2367175, Length=257, Percent_Identity=31.5175097276265, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=27.8884462151394, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=31.4516129032258, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.4354838709677, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=29.3436293436293, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=26.0162601626016, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787820, Length=230, Percent_Identity=29.5652173913043, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367365, Length=235, Percent_Identity=29.3617021276596, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789378, Length=254, Percent_Identity=26.3779527559055, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787526, Length=252, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=33.7209302325581, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=32.0158102766798, Blast_Score=103, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=256, Percent_Identity=31.25, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=27.4193548387097, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71994600, Length=258, Percent_Identity=31.7829457364341, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=32.156862745098, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=32.183908045977, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=31.0483870967742, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=256, Percent_Identity=28.90625, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=29.0697674418605, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=31.6793893129771, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=31.6793893129771, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=244, Percent_Identity=29.9180327868852, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=198, Percent_Identity=28.7878787878788, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=30.5343511450382, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=28.6792452830189, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=30.6513409961686, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=189, Percent_Identity=30.6878306878307, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=184, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=30.6513409961686, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=257, Percent_Identity=31.9066147859922, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=183, Percent_Identity=30.6010928961749, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193203115, Length=183, Percent_Identity=30.6010928961749, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=30.5343511450382, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=29.8449612403101, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=29.1187739463602, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=186, Percent_Identity=31.7204301075269, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=27.6119402985075, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=29.9242424242424, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=27.4131274131274, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=259, Percent_Identity=25.8687258687259, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI86565303, Length=214, Percent_Identity=29.4392523364486, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6319635, Length=186, Percent_Identity=27.4193548387097, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6322861, Length=183, Percent_Identity=29.5081967213115, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=25.3968253968254, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=117, Percent_Identity=36.7521367521368, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322227, Length=192, Percent_Identity=28.125, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=35.3413654618474, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=33.8645418326693, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=33.8645418326693, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=32.2314049586777, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=29.7619047619048, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=30.1587301587302, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=29.0196078431373, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281364892, Length=172, Percent_Identity=33.7209302325581, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644337, Length=177, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24584744, Length=199, Percent_Identity=29.6482412060301, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28574402, Length=199, Percent_Identity=29.6482412060301, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161076933, Length=192, Percent_Identity=29.6875, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24584748, Length=192, Percent_Identity=29.6875, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI18859837, Length=240, Percent_Identity=28.75, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24584752, Length=197, Percent_Identity=31.4720812182741, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355631, Length=169, Percent_Identity=33.7278106508876, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649181, Length=188, Percent_Identity=29.7872340425532, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24640442, Length=190, Percent_Identity=30, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21356301, Length=262, Percent_Identity=27.4809160305344, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24641232, Length=205, Percent_Identity=27.8048780487805, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21358495, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24586328, Length=199, Percent_Identity=31.6582914572864, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580925, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28573296, Length=209, Percent_Identity=30.622009569378, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581726, Length=190, Percent_Identity=27.8947368421053, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221510726, Length=195, Percent_Identity=31.2820512820513, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25495; Mature: 25363

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPAAAHAIVTGGGRGIGREIAQSLKRGGATVTIVGRNRATLGEAIAAGCADHAAVAD
CCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHH
VADQSALGEAVAAAAARQPITILVANAGSAESAPFLKSDAELFRRMMDVNFMGVVHAVQA
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
VLPAMKGGRYGRIVAVASTAGLKGYPYVSAYTAAKHAVVGLTRSLALELAATSVTVNAVC
HHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC
PGFTGTDLVADSVDNIMKKTGRSREQAIAELAKHNPQGRLIKPQEVADTVLWLCGEGAGA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCCCCC
ITGQAIAVAGGEV
CCCCEEEECCCCC
>Mature Secondary Structure 
SGLPAAAHAIVTGGGRGIGREIAQSLKRGGATVTIVGRNRATLGEAIAAGCADHAAVAD
CCCCCHHHEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHH
VADQSALGEAVAAAAARQPITILVANAGSAESAPFLKSDAELFRRMMDVNFMGVVHAVQA
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
VLPAMKGGRYGRIVAVASTAGLKGYPYVSAYTAAKHAVVGLTRSLALELAATSVTVNAVC
HHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEC
PGFTGTDLVADSVDNIMKKTGRSREQAIAELAKHNPQGRLIKPQEVADTVLWLCGEGAGA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCCCCC
ITGQAIAVAGGEV
CCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2469622; 12000953 [H]