Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is catD [H]

Identifier: 146339338

GI number: 146339338

Start: 2471081

End: 2471908

Strand: Reverse

Name: catD [H]

Synonym: BRADO2319

Alternate gene names: 146339338

Gene position: 2471908-2471081 (Counterclockwise)

Preceding gene: 146339343

Following gene: 146339337

Centisome position: 33.15

GC content: 65.46

Gene sequence:

>828_bases
GTGTCCGCGCTGCAAATCCTGACCACCAAGGACGGCCGCTTCGGCTACGAGGCCGCGGGAGCGCCCGATCGGCAGACCCT
GGTGTTCCTGCACGGCATCGGCGGCGCGGCGCGCGCCTGGCGCGGCCAGCTTGCGCATTTCGGCGAGCGCTTTCATACGG
TGGCGTGGGACATGCCAGGCTATGGGCGATCCACCAGACTCGATACGGCGAGCATCATCACGCTGGCCGCTGCGCTTCAG
GACTTCCTGATCCAGATCGCCGCCCGCAAGCCGATCCTGGTCGGACATTCGATCGGTGGGATGATCGTCCAGGAATGGCT
GATGACTCATGCGCAGGCTGCCAGCGCTGTGGTGCTGGCGCAGACCAGCCCGGCGTTCGGCAAGGCCGATGGCGACTGGC
AGAAGTCCTTTATCGAGGCGCGCCTCGGGCCACTCGATCGCGGTGCCACGATGGCATCGCTGGCTCCGGACCTCGTGAAA
GAGTTGGTCGGCGATGATCCCGACCCGCAGGGACTCGAACTCGCGACCTCCTGCATGGCGGGCGTTCCCGAGGCGAGCTA
TCGCGCCAGCATGCTGGCGCTGCTTGGCTTCGACCGGCGGCAGGCCCTCAAGGACATCAAGGTGCCGACGCTGGTGCTGT
CGGGATCGAAGGATCGCAATGCGCCGGCGCCGATGATGGAGAAGATGGCGGGCTTCATTCCCGGCGCTCGATACGTCGAG
CTCGAAGGGGCGGGTCATCTCGTCAATCTCGAACGTCCCGGCGAATTCAACGCTGCGCTCGACTCCTTTCTGAAATCATA
CGGCACGACGACTGCGGAGGCACGATGA

Upstream 100 bases:

>100_bases
AACACGGCCGAAGCGGCTTGACACTCTTGTCGACGCGGCTAGCGTTCGAAGGCCTGGAGCAAGCAGCGTTGCGGCCTCGG
GCGCCATCTCGGAGGTCTGC

Downstream 100 bases:

>100_bases
CCATCCAGGTGCAGAAGACGGCAACGGCCTCCGGTGAGGCGCTCGATGCGCCGATGTTCGATCCGGCTGCCTATCGGCTG
ACGTCTGAGCAGGCCGACAT

Product: putative Alpha/beta hydrolase carboxylesterase/3-oxoadipate enol-lactonase

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPGYGRSTRLDTASIITLAAALQ
DFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLAQTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVK
ELVGDDPDPQGLELATSCMAGVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE
LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR

Sequences:

>Translated_275_residues
MSALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPGYGRSTRLDTASIITLAAALQ
DFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLAQTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVK
ELVGDDPDPQGLELATSCMAGVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE
LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR
>Mature_274_residues
SALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPGYGRSTRLDTASIITLAAALQD
FLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLAQTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVKE
LVGDDPDPQGLELATSCMAGVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVEL
EGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789817, Length=246, Percent_Identity=25.2032520325203, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 29380; Mature: 29249

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPG
CCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCC
YGRSTRLDTASIITLAAALQDFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCEEEEE
QTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVKELVGDDPDPQGLELATSCMA
ECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE
CCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEE
LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR
EECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPG
CCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCC
YGRSTRLDTASIITLAAALQDFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCEEEEE
QTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVKELVGDDPDPQGLELATSCMA
ECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE
CCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEE
LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR
EECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8125318; 670169 [H]