| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is catD [H]
Identifier: 146339338
GI number: 146339338
Start: 2471081
End: 2471908
Strand: Reverse
Name: catD [H]
Synonym: BRADO2319
Alternate gene names: 146339338
Gene position: 2471908-2471081 (Counterclockwise)
Preceding gene: 146339343
Following gene: 146339337
Centisome position: 33.15
GC content: 65.46
Gene sequence:
>828_bases GTGTCCGCGCTGCAAATCCTGACCACCAAGGACGGCCGCTTCGGCTACGAGGCCGCGGGAGCGCCCGATCGGCAGACCCT GGTGTTCCTGCACGGCATCGGCGGCGCGGCGCGCGCCTGGCGCGGCCAGCTTGCGCATTTCGGCGAGCGCTTTCATACGG TGGCGTGGGACATGCCAGGCTATGGGCGATCCACCAGACTCGATACGGCGAGCATCATCACGCTGGCCGCTGCGCTTCAG GACTTCCTGATCCAGATCGCCGCCCGCAAGCCGATCCTGGTCGGACATTCGATCGGTGGGATGATCGTCCAGGAATGGCT GATGACTCATGCGCAGGCTGCCAGCGCTGTGGTGCTGGCGCAGACCAGCCCGGCGTTCGGCAAGGCCGATGGCGACTGGC AGAAGTCCTTTATCGAGGCGCGCCTCGGGCCACTCGATCGCGGTGCCACGATGGCATCGCTGGCTCCGGACCTCGTGAAA GAGTTGGTCGGCGATGATCCCGACCCGCAGGGACTCGAACTCGCGACCTCCTGCATGGCGGGCGTTCCCGAGGCGAGCTA TCGCGCCAGCATGCTGGCGCTGCTTGGCTTCGACCGGCGGCAGGCCCTCAAGGACATCAAGGTGCCGACGCTGGTGCTGT CGGGATCGAAGGATCGCAATGCGCCGGCGCCGATGATGGAGAAGATGGCGGGCTTCATTCCCGGCGCTCGATACGTCGAG CTCGAAGGGGCGGGTCATCTCGTCAATCTCGAACGTCCCGGCGAATTCAACGCTGCGCTCGACTCCTTTCTGAAATCATA CGGCACGACGACTGCGGAGGCACGATGA
Upstream 100 bases:
>100_bases AACACGGCCGAAGCGGCTTGACACTCTTGTCGACGCGGCTAGCGTTCGAAGGCCTGGAGCAAGCAGCGTTGCGGCCTCGG GCGCCATCTCGGAGGTCTGC
Downstream 100 bases:
>100_bases CCATCCAGGTGCAGAAGACGGCAACGGCCTCCGGTGAGGCGCTCGATGCGCCGATGTTCGATCCGGCTGCCTATCGGCTG ACGTCTGAGCAGGCCGACAT
Product: putative Alpha/beta hydrolase carboxylesterase/3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPGYGRSTRLDTASIITLAAALQ DFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLAQTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVK ELVGDDPDPQGLELATSCMAGVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR
Sequences:
>Translated_275_residues MSALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPGYGRSTRLDTASIITLAAALQ DFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLAQTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVK ELVGDDPDPQGLELATSCMAGVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR >Mature_274_residues SALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPGYGRSTRLDTASIITLAAALQD FLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLAQTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVKE LVGDDPDPQGLELATSCMAGVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVEL EGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789817, Length=246, Percent_Identity=25.2032520325203, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29380; Mature: 29249
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPG CCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCC YGRSTRLDTASIITLAAALQDFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCEEEEE QTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVKELVGDDPDPQGLELATSCMA ECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH GVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE CCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEE LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR EECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SALQILTTKDGRFGYEAAGAPDRQTLVFLHGIGGAARAWRGQLAHFGERFHTVAWDMPG CCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCC YGRSTRLDTASIITLAAALQDFLIQIAARKPILVGHSIGGMIVQEWLMTHAQAASAVVLA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCEEEEE QTSPAFGKADGDWQKSFIEARLGPLDRGATMASLAPDLVKELVGDDPDPQGLELATSCMA ECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH GVPEASYRASMLALLGFDRRQALKDIKVPTLVLSGSKDRNAPAPMMEKMAGFIPGARYVE CCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEE LEGAGHLVNLERPGEFNAALDSFLKSYGTTTAEAR EECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]