| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tauC [H]
Identifier: 146339332
GI number: 146339332
Start: 2462752
End: 2463513
Strand: Direct
Name: tauC [H]
Synonym: BRADO2311
Alternate gene names: 146339332
Gene position: 2462752-2463513 (Clockwise)
Preceding gene: 146339331
Following gene: 146339333
Centisome position: 33.03
GC content: 67.06
Gene sequence:
>762_bases ATGACGCGCACCTCCAACGATATCCTGCTGGGTGCCGCGCCGATCGTGCTCGTCCTGCTGCTGTGGCAGGGTCTCGTGTC GTTCGGCTACGCGCCGGCGACCCTGCTGCCGCCGCCCGGGCAGGTCTTCCTGCGCATGGCGCAGCAACTCTCCAGCATCA CCTTCCAGCAGGATATCGCCGCGACGCTGTTCCGGCTGTTCGCCGGCTTCGCCATCGCCGTCGTGCTCGGCGTCTCGCTC GGCATCGCCGCAGCGGTGAGTCCGCCGATCAACGCCGCCGTCAAGCCGATCGTGCGCGTGCTGGCGCCGCTGCCGAAGGT CGCGCTCTATCCAGCCTTTCTGCTGCTGCTCGGCTTCGGCCACGAATCCAAGGTCATGCTTGTGGCGGCGGATGCGCTGT TCCCGATCCTGCTGTCCACCTATTACGGCGCCACCAATGTCGAGCAGAAGCTGATCTGGTCGGCGCTCGCCGCCGGCACG CCGCCGCGCGACGTGCTGTGGAAGGTGGTGCTGCCGGCCGCCATGCCCTCGATCCTGACCGGCTGCCGCATCGGCCTCGT GATTTCCTGCATCGTCGTGTTCCTGGCGGAGATGATCACCTCGACCGACGGGCTCGGCCATGTGCTTGTCACCGCCGCGC GCACCTTCCAGGCGGTCGACATGTTCGTGCCGCTGATCACGATCTCGCTCTTGGGTCTCATCCTCAATGCCCTGCTGCAG GGCCTGCGCGCCTATCTGCTGCGCGGCTTCCCCTCAGTCTGA
Upstream 100 bases:
>100_bases TCGGAGCCATGGGCATCTGTCTCGACGCGGCGTTCGAGATCGTCAGGCGCTGGCTGGTGCGCTGGTCGGAGCCGCAATTC GACATGCCCCTGAGCTTCTC
Downstream 100 bases:
>100_bases TAAACACAACGAACGACAATCGGGAGAACGACCATGCTAGCGGATCGCATCGAGGCGAAATGGATCGACGCATTCTGCGA GATCTTCGAGCGCTGCGCGG
Product: putative ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTRTSNDILLGAAPIVLVLLLWQGLVSFGYAPATLLPPPGQVFLRMAQQLSSITFQQDIAATLFRLFAGFAIAVVLGVSL GIAAAVSPPINAAVKPIVRVLAPLPKVALYPAFLLLLGFGHESKVMLVAADALFPILLSTYYGATNVEQKLIWSALAAGT PPRDVLWKVVLPAAMPSILTGCRIGLVISCIVVFLAEMITSTDGLGHVLVTAARTFQAVDMFVPLITISLLGLILNALLQ GLRAYLLRGFPSV
Sequences:
>Translated_253_residues MTRTSNDILLGAAPIVLVLLLWQGLVSFGYAPATLLPPPGQVFLRMAQQLSSITFQQDIAATLFRLFAGFAIAVVLGVSL GIAAAVSPPINAAVKPIVRVLAPLPKVALYPAFLLLLGFGHESKVMLVAADALFPILLSTYYGATNVEQKLIWSALAAGT PPRDVLWKVVLPAAMPSILTGCRIGLVISCIVVFLAEMITSTDGLGHVLVTAARTFQAVDMFVPLITISLLGLILNALLQ GLRAYLLRGFPSV >Mature_252_residues TRTSNDILLGAAPIVLVLLLWQGLVSFGYAPATLLPPPGQVFLRMAQQLSSITFQQDIAATLFRLFAGFAIAVVLGVSLG IAAAVSPPINAAVKPIVRVLAPLPKVALYPAFLLLLGFGHESKVMLVAADALFPILLSTYYGATNVEQKLIWSALAAGTP PRDVLWKVVLPAAMPSILTGCRIGLVISCIVVFLAEMITSTDGLGHVLVTAARTFQAVDMFVPLITISLLGLILNALLQG LRAYLLRGFPSV
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=222, Percent_Identity=32.4324324324324, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=29.5546558704453, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789033, Length=181, Percent_Identity=31.4917127071823, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26770; Mature: 26638
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTSNDILLGAAPIVLVLLLWQGLVSFGYAPATLLPPPGQVFLRMAQQLSSITFQQDIA CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ATLFRLFAGFAIAVVLGVSLGIAAAVSPPINAAVKPIVRVLAPLPKVALYPAFLLLLGFG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC HESKVMLVAADALFPILLSTYYGATNVEQKLIWSALAAGTPPRDVLWKVVLPAAMPSILT CCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GCRIGLVISCIVVFLAEMITSTDGLGHVLVTAARTFQAVDMFVPLITISLLGLILNALLQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRAYLLRGFPSV HHHHHHHHCCCCC >Mature Secondary Structure TRTSNDILLGAAPIVLVLLLWQGLVSFGYAPATLLPPPGQVFLRMAQQLSSITFQQDIA CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ATLFRLFAGFAIAVVLGVSLGIAAAVSPPINAAVKPIVRVLAPLPKVALYPAFLLLLGFG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC HESKVMLVAADALFPILLSTYYGATNVEQKLIWSALAAGTPPRDVLWKVVLPAAMPSILT CCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GCRIGLVISCIVVFLAEMITSTDGLGHVLVTAARTFQAVDMFVPLITISLLGLILNALLQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRAYLLRGFPSV HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]